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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9346 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2013-01-31 16:31:03 +00:00
parent 21590469d0
commit 0c6b84987c
55 changed files with 498 additions and 170 deletions
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11
src/comm.cpp
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@ -798,10 +798,13 @@ void Comm::exchange()
// clear global->local map for owned and ghost atoms
// b/c atoms migrate to new procs in exchange() and
// new ghosts are created in borders()
// new ghosts are created in borders()
// map_set() is done at end of borders()
// clear ghost count and any ghost bonus data internal to AtomVec
if (map_style) atom->map_clear();
atom->nghost = 0;
atom->avec->clear_bonus();
// subbox bounds for orthogonal or triclinic
@ -836,6 +839,7 @@ void Comm::exchange()
}
atom->nlocal = nlocal;
// send/recv atoms in both directions
// if 1 proc in dimension, no send/recv, set recv buf to send buf
// if 2 procs in dimension, single send/recv
@ -907,11 +911,6 @@ void Comm::borders()
MPI_Status status;
AtomVec *avec = atom->avec;
// clear old ghosts and any ghost bonus data internal to AtomVec
atom->nghost = 0;
atom->avec->clear_bonus();
// do swaps over all 3 dimensions
iswap = 0;