spelling fixes

doc/src/Howto_rheo.rst

@@ -4,7 +4,7 @@ Reproducing hydrodynamics and elastic objects (RHEO)
 The RHEO package is a hybrid implementation of smoothed particle
 hydrodynamics (SPH) for fluid flow, coupled to the :doc:`BPM package <Howto_bpm>`
 to model solid elements. RHEO combines these methods to enable mesh-free modeling
-of multiphase material systems. The SPH solver supports many advanced options
+of multi-phase material systems. The SPH solver supports many advanced options
 including reproducing kernels, particle shifting, free surface identification,
 and solid surface reconstruction. To model fluid-solid systems, the status of
 particles can dynamically change between a fluid and solid state, e.g. during
@@ -30,7 +30,7 @@ of reproducing kernels). In conjunction to fix rheo, one must specify an
 instance of :doc:`fix rheo/pressure <fix_rheo_pressure>` and
 :doc:`fix rheo/viscosity <fix_rheo_viscosity>` to define a pressure equation
 of state and viscosity model, respectively. Optionally, one can model
-a heat equation with :doc:`fix rheo/thermal <fix_rhe0_thermal>`, which also
+a heat equation with :doc:`fix rheo/thermal <fix_rheo_thermal>`, which also
 allows the user to specify equations for a particle's thermal conductivity,
 specific heat, latent heat, and melting temperature. The ordering of these
 fixes in an an input script matters. Fix rheo must be defined prior to all
@@ -44,7 +44,7 @@ conductivity. Note that the temperature is always derived from the energy.
 This implies the *temperature* attribute of :doc:`the set command <set>` does not
 affect particles. Instead, one should use the *sph/e* attribute.
 
-The status variable uses bitmasking to track various properties of a particle
+The status variable uses bit-masking to track various properties of a particle
 such as its current state of matter (fluid or solid) and its location relative
 to a surface. Some of these properties (and others) can be accessed using
 :doc:`compute rheo/property/atom <compute_rheo_property_atom>`. The *status*
@@ -88,8 +88,8 @@ as bonds are created/broken.
 The other option for elastic objects is an elastic shell that is nominally much
 thinner than a particle diameter, e.g. a oxide skin which gradually forms over time
 on the surface of a fluid. Currently, this is implemented using
-:doc:`fix rheo/oxidaton <fix_rheo_oxidation>` and bond style
-:doc:`rheo/shell <bond_rheo_shell>`. Essentially, fix rheo/oxidaton creates candidate
+:doc:`fix rheo/oxidation <fix_rheo_oxidation>` and bond style
+:doc:`rheo/shell <bond_rheo_shell>`. Essentially, fix rheo/oxidation creates candidate
 bonds of a specified type between surface fluid particles within a specified distance.
 a newly created rheo/shell bond will then start a timer. While the timer is counting
 down, the bond will delete itself if particles move too far apart or move away from the

doc/src/atom_modify.rst

@@ -190,7 +190,7 @@ Default
 By default, *id* is yes.  By default, atomic systems (no bond topology
 info) do not use a map.  For molecular systems (with bond topology
 info), the default is to use a map of either *array* or *hash* style
-depending on the size of the sustem, as explained above for the *map
+depending on the size of the system, as explained above for the *map
 yes* keyword/value option.  By default, a *first* group is not
 defined.  By default, sorting is enabled with a frequency of 1000 and
 a binsize of 0.0, which means the neighbor cutoff will be used to set

doc/src/fix_rheo.rst

@@ -90,7 +90,7 @@ In systems with free surfaces, the *surface/detection* keyword can be used
 to classify the location of particles as being within the bulk fluid, on a
 free surface, or isolated from other particles in a splash or droplet.
 Shifting is then disabled in the normal direction away from the free surface
-to prevent particles from difusing away. Surface detection can also be used
+to prevent particles from diffusing away. Surface detection can also be used
 to control surface-nucleated effects like oxidation when used in combination
 with :doc:`fix rheo/oxidation <fix_rheo_oxidation>`. Surface detection is not
 performed on solid bodies.
@@ -145,7 +145,7 @@ Restrictions
 """"""""""""
 
 This fix must be used with atom style rheo or rheo/thermal. This fix must
-be used in conjuction with :doc:`fix rheo/pressure <fix_rheo_pressure>`.
+be used in conjunction with :doc:`fix rheo/pressure <fix_rheo_pressure>`.
 and :doc:`fix rheo/viscosity <fix_rheo_viscosity>`. If the *thermal* setting
 is used, there must also be an instance of
 :doc:`fix rheo/thermal <fix_rheo_thermal>`. The fix group must be set to all.

doc/src/fix_rheo_pressure.rst

@@ -86,7 +86,7 @@ Restrictions
 
 This fix must be used with an atom style that includes density
 such as atom_style rheo or rheo/thermal. This fix must be used in
-conjuction with :doc:`fix rheo <fix_rheo>`. The fix group must be
+conjunction with :doc:`fix rheo <fix_rheo>`. The fix group must be
 set to all. Only one instance of fix rheo/pressure can be defined.
 
 This fix is part of the RHEO package.  It is only enabled if

doc/src/fix_rheo_thermal.rst

@@ -105,8 +105,8 @@ Restrictions
 """"""""""""
 
 This fix must be used with an atom style that includes temperature,
-heatflow, and conductivity such as atom_tyle rheo/thermal This fix
-must be used in conjuction with :doc:`fix rheo <fix_rheo>` with the
+heatflow, and conductivity such as atom_style rheo/thermal This fix
+must be used in conjunction with :doc:`fix rheo <fix_rheo>` with the
 *thermal* setting. The fix group must be set to all. Only one
 instance of fix rheo/pressure can be defined.
 

doc/src/fix_rheo_viscosity.rst

@@ -91,7 +91,7 @@ Restrictions
 
 This fix must be used with an atom style that includes viscosity
 such as atom_style rheo or rheo/thermal. This fix must be used in
-conjuction with :doc:`fix rheo <fix_rheo>`. The fix group must be
+conjunction with :doc:`fix rheo <fix_rheo>`. The fix group must be
 set to all. Only one instance of fix rheo/viscosity can be defined.
 
 This fix is part of the RHEO package.  It is only enabled if

doc/utils/sphinx-config/false_positives.txt

@@ -393,6 +393,7 @@ buf
 builtin
 Bulacu
 Bulatov
+Bulkley
 Bureekaew
 burlywood
 Bussi
@@ -564,6 +565,7 @@ cond
 conda
 Conda
 Condens
+conductivities
 conf
 config
 configfile
@@ -1440,6 +1442,7 @@ henrich
 Henrich
 Hermitian
 Herrmann
+Hershchel
 Hertizian
 hertzian
 Hertzsch
@@ -1831,6 +1834,7 @@ Kspace
 KSpace
 KSpaceStyle
 Kspring
+kstyle
 kT
 kTequil
 kth
@@ -2271,6 +2275,7 @@ modelled
 modelling
 Modelling
 Modine
+modularity
 moduli
 mofff
 MOFFF
@@ -2488,6 +2493,7 @@ Neumann
 Nevent
 nevery
 Nevery
+Nevins
 newfile
 Newns
 newtype
@@ -3067,6 +3073,7 @@ quatw
 queryargs
 Queteschiner
 quickmin
+quintic
 qw
 qx
 qy
@@ -3078,6 +3085,7 @@ radialscreenedspin
 radialspin
 radian
 radians
+radiative
 radj
 Rafferty
 rahman
@@ -3181,6 +3189,7 @@ rg
 Rg
 Rhaphson
 Rhe
+rheo
 rheological
 rheology
 rhodo
@@ -3268,6 +3277,7 @@ rsort
 rsq
 rst
 rstyle
+rsurf
 Rubensson
 Rubia
 Rud
@@ -3651,6 +3661,7 @@ Telsa
 tempCorrCoeff
 templated
 Templeton
+Tencer
 Tequil
 ters
 tersoff
@@ -3997,6 +4008,7 @@ Vries
 Vsevolod
 Vsmall
 Vstream
+vstyle
 vtarget
 vtk
 VTK