Update Errors_messages.txt
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@ -610,6 +610,62 @@ This means there is something invalid about the topology definitions. :dd
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The data file header lists bonds but no bond types. :dd
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{Bond/react: Cannot use fix bond/react with non-molecular systems} :dt
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Only systems with bonds that can be changed can be used. Atom_style
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template does not qualify. :dd
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{Bond/react: Rmax cutoff is longer than pairwise cutoff} :dt
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This is not allowed because bond creation is done using the pairwise
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neighbor list. :dd
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{Bond/react: Molecule template ID for fix bond/react does not exist} :dt
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A valid molecule template must have been created with the molecule
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command. :dd
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{Bond/react: Reaction templates must contain the same number of atoms} :dt
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There should be a one-to-one correspondence between atoms in the
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pre-reacted and post-reacted templates, as specified by the map file. :dd
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{Bond/react: Unknown section in map file} :dt
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Please ensure reaction map files are properly formatted. :dd
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{Bond/react: Atom affected by reaction too close to template edge} :dt
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This means an atom which changes type during the reaction is too close
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to an 'edge' atom defined in the superimpose file. This could cause
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incorrect assignment of bonds, angle, etc. Generally, this means you
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must include more atoms in your templates, such that there are at
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least two atoms between each atom involved in the reaction and an edge
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atom. :dd
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{Bond/react: Fix bond/react needs ghost atoms from farther away} :dt
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This is because a processor needs to superimpose the entire unreacted
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molecule template onto simulation atoms it knows about. The
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comm_modify cutoff command can be used to extend the communication
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range. :dd
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{Bond/react: A deleted atom cannot remain bonded to an atom that is not deleted} :dt
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Self-explanatory. :dd
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{Bond/react special bond generation overflow} :dt
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The number of special bonds per-atom created by a reaction exceeds the
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system setting. See the read_data or create_box command for how to
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specify this value. :dd
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{Bond/react topology/atom exceed system topology/atom} :dt
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The number of bonds, angles etc per-atom created by a reaction exceeds
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the system setting. See the read_data or create_box command for how to
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specify this value. :dd
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{Both restart files must use % or neither} :dt
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Self-explanatory. :dd
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