Clarified some points in in.molecular example
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@ -6,6 +6,11 @@ timestep 0.0001 # 0.1 fs
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read_data methane-box-8.data
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# DISCLAIMER: This potential mixes parameters from methane and silane
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# potentials and is NOT intended to be a realistic representation of either
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# system. It is meant to demonstrate the use of hybrid QUIP/LAMMPS potentials,
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# including the use of separate 'special_bonds' settings.
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pair_style hybrid/overlay lj/cut 8.0 quip
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# exclusion setting for quip; cannot be exactly 1.0 1.0 1.0,
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@ -13,6 +18,7 @@ pair_style hybrid/overlay lj/cut 8.0 quip
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special_bonds lj/coul 0.999999999 0.999999999 0.999999999
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# Intermolecular: OPLS (JACS 118 (45), p. 11225 (1996))
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# Coulomb interactions ommitted for simplicity
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pair_coeff 1 1 lj/cut 0.0028619844 3.5 # CT
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pair_coeff 2 2 lj/cut 0.0013009018 2.5 # HC
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pair_coeff 1 2 lj/cut 0.0019295487 2.95
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