git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5715 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
31
examples/USER/eff/ECP/SiH4/data.SiH4
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31
examples/USER/eff/ECP/SiH4/data.SiH4
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Created using cfg2lammps (c) AJB-2009
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13 atoms
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3 atom types
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-1000.000 1000.0 xlo xhi
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-1000.000 1000.0 ylo yhi
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-1000.000 1000.0 zlo zhi
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Masses
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1 9.012182
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2 1.007940
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3 1.000000
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Atoms
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1 1 4.00 3 1.691398 0.000000 0.000000 0.000000
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2 2 1.00 0 0.0 -1.619843 1.619843 1.619843
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3 2 1.00 0 0.0 -1.619843 -1.619843 -1.619843
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4 2 1.00 0 0.0 1.619843 1.619843 -1.619843
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5 2 1.00 0 0.0 1.619843 -1.619843 1.619843
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6 3 0.0 1 1.984000 -1.145229 1.145229 1.145229
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7 3 0.0 -1 1.984000 -1.145229 1.145229 1.145229
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8 3 0.0 1 1.984000 -1.145229 -1.145229 -1.145229
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9 3 0.0 -1 1.984000 -1.145229 -1.145229 -1.145229
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10 3 0.0 1 1.984000 1.145229 1.145229 -1.145229
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11 3 0.0 -1 1.984000 1.145229 1.145229 -1.145229
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12 3 0.0 1 1.984000 1.145229 -1.145229 1.145229
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13 3 0.0 -1 1.984000 1.145229 -1.145229 1.145229
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31
examples/USER/eff/ECP/SiH4/data.SiH4.ang
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31
examples/USER/eff/ECP/SiH4/data.SiH4.ang
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@ -0,0 +1,31 @@
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Created using cfg2lammps (c) AJB-2009
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13 atoms
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3 atom types
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-529.177249 529.177249 xlo xhi
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-529.177249 529.177249 ylo yhi
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-529.177249 529.177249 zlo zhi
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Masses
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1 9.012182
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2 1.007940
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3 1.000000
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Atoms
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1 1 4.00 3 0.895049 0.000000 0.000000 0.000000
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2 2 1.00 0 0.000000 -0.857184 0.857184 0.857184
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3 2 1.00 0 0.000000 -0.857184 -0.857184 -0.857184
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4 2 1.00 0 0.000000 0.857184 0.857184 -0.857184
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5 2 1.00 0 0.000000 0.857184 -0.857184 0.857184
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6 3 0.0 1 1.049888 -0.606029 0.606029 0.606029
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7 3 0.0 -1 1.049888 -0.606029 0.606029 0.606029
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8 3 0.0 1 1.049888 -0.606029 -0.606029 -0.606029
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9 3 0.0 -1 1.049888 -0.606029 -0.606029 -0.606029
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10 3 0.0 1 1.049888 0.606029 0.606029 -0.606029
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11 3 0.0 -1 1.049888 0.606029 0.606029 -0.606029
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12 3 0.0 1 1.049888 0.606029 -0.606029 0.606029
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13 3 0.0 -1 1.049888 0.606029 -0.606029 0.606029
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50
examples/USER/eff/ECP/SiH4/in.SiH4
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50
examples/USER/eff/ECP/SiH4/in.SiH4
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# Created 2011-01-07
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# General parameters
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variable sname index SiH4
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log ${sname}.log
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units electron
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newton on
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boundary f f f
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special_bonds coul 1 0 0
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atom_style electron
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read_data data.${sname}
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pair_style eff/cut 1000.0
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pair_coeff * *
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compute energies all pair eff/cut
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variable eke equal c_energies[1]
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variable epauli equal c_energies[2]
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variable estatics equal c_energies[3]
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variable errestrain equal c_energies[4]
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communicate single vel yes
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compute peratom all stress/atom
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compute p all reduce sum c_peratom[1] c_peratom[2] c_peratom[3]
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variable press equal -(c_p[1]+c_p[2]+c_p[3])/(3*vol)
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compute effTemp all temp/eff
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compute effPress all pressure effTemp
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thermo 1
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thermo_style custom step etotal pe ke v_eke v_epauli v_estatics v_errestrain temp press v_press
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thermo_modify temp effTemp press effPress
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# Minimization
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min_style cg
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dump 1 all xyz 1 ${sname}.min.xyz
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dump 2 all custom 1 ${sname}.min.lammpstrj id type q spin eradius x y z fx fy fz erforce
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min_modify line quadratic
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minimize 0 1.0e-5 1000 10000
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undump 1
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undump 2
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49
examples/USER/eff/ECP/SiH4/in.SiH4.ang
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49
examples/USER/eff/ECP/SiH4/in.SiH4.ang
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@ -0,0 +1,49 @@
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# Created 2011-01-07
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# General parameters
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variable sname index SiH4.ang
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log ${sname}.log
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units real
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newton on
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boundary f f f
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atom_style electron
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read_data data.${sname}
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pair_style eff/cut 529.177249
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pair_coeff * *
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compute energies all pair eff/cut
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variable eke equal c_energies[1]
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variable epauli equal c_energies[2]
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variable estatics equal c_energies[3]
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variable errestrain equal c_energies[4]
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communicate single vel yes
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compute peratom all stress/atom
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compute p all reduce sum c_peratom[1] c_peratom[2] c_peratom[3]
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variable press equal -(c_p[1]+c_p[2]+c_p[3])/(3*vol)
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compute effTemp all temp/eff
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compute effPress all pressure effTemp
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thermo 1
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thermo_style custom step etotal pe ke v_eke v_epauli v_estatics v_errestrain temp press v_press
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thermo_modify temp effTemp press effPress
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# Minimization
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min_style cg
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dump 1 all xyz 1 ${sname}.min.xyz
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dump 2 all custom 1 ${sname}.min.lammpstrj id type q spin eradius x y z fx fy fz erforce
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min_modify line quadratic
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minimize 0 1.0e-5 1000 10000
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undump 1
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undump 2
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