diff --git a/doc/fix_modify.html b/doc/fix_modify.html index 362942c298..7dd8d7482e 100644 --- a/doc/fix_modify.html +++ b/doc/fix_modify.html @@ -67,8 +67,8 @@ fix-ID of the appropriate fix.

Related commands:

-

fix, temperature, -thermo_style +

fix, compute temp, compute +pressure, thermo_style

Default:

diff --git a/doc/fix_modify.txt b/doc/fix_modify.txt index a4699187a1..08a3e9a49f 100644 --- a/doc/fix_modify.txt +++ b/doc/fix_modify.txt @@ -60,8 +60,8 @@ fix-ID of the appropriate fix. [Related commands:] -"fix"_fix.html, "temperature"_temperature.html, -"thermo_style"_thermo_style.html +"fix"_fix.html, "compute temp"_compute_temp.html, "compute +pressure"_compute_pressure.html, "thermo_style"_thermo_style.html [Default:] diff --git a/doc/fix_nph.html b/doc/fix_nph.html index 4b9b2400d7..4553324532 100644 --- a/doc/fix_nph.html +++ b/doc/fix_nph.html @@ -131,11 +131,11 @@ as if these commands had been issued: 
compute fix-ID_press group-ID pressure fix-ID_temp
-

See the compute temp and >>compute +

See the compute temp and compute pressure commands for details. Note that the -IDs of the new computes are the fix-ID with or -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group.

Note that these are NOT the computes used by thermodynamic output (see the thermo_style command) with ID = thermo_temp diff --git a/doc/fix_nph.txt b/doc/fix_nph.txt index a3d80a59a9..06359cfbc2 100644 --- a/doc/fix_nph.txt +++ b/doc/fix_nph.txt @@ -123,9 +123,9 @@ compute fix-ID_press group-ID pressure fix-ID_temp :pre See the "compute temp"_compute_temp.html and "compute pressure"_compute_pressure.html commands for details. Note that the -IDs of the new computes are the fix-ID with "_temp" or "_press" -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group. Note that these are NOT the computes used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp} diff --git a/doc/fix_npt.html b/doc/fix_npt.html index 66b4bc6726..cc4eaa631f 100644 --- a/doc/fix_npt.html +++ b/doc/fix_npt.html @@ -135,11 +135,11 @@ as if these commands had been issued: 

compute fix-ID_temp group-ID temp
 compute fix-ID_press group-ID pressure fix-ID_temp
-

See the compute temp and >>compute +

See the compute temp and compute pressure commands for details. Note that the -IDs of the new computes are the fix-ID with or -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group.

Note that these are NOT the computes used by thermodynamic output (see the thermo_style command) with ID = thermo_temp diff --git a/doc/fix_npt.txt b/doc/fix_npt.txt index b07993496c..72d95f6045 100644 --- a/doc/fix_npt.txt +++ b/doc/fix_npt.txt @@ -126,9 +126,9 @@ compute fix-ID_press group-ID pressure fix-ID_temp :pre See the "compute temp"_compute_temp.html and "compute pressure"_compute_pressure.html commands for details. Note that the -IDs of the new computes are the fix-ID with "_temp" or "_press" -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group. Note that these are NOT the computes used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp} diff --git a/doc/fix_npt_asphere.html b/doc/fix_npt_asphere.html index 0ce1baf406..dd24f725b6 100644 --- a/doc/fix_npt_asphere.html +++ b/doc/fix_npt_asphere.html @@ -134,11 +134,11 @@ this, the fix creates its own computes of style "temp/asphere" and 

compute fix-ID_temp group-ID temp/asphere
 compute fix-ID_press group-ID pressure fix-ID_temp
-

See the compute temp/asphere and >>compute +

See the compute temp/asphere and compute pressure commands for details. Note that the -IDs of the new computes are the fix-ID with or -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group.

Note that these are NOT the computes used by thermodynamic output (see the thermo_style command) with ID = thermo_temp diff --git a/doc/fix_npt_asphere.txt b/doc/fix_npt_asphere.txt index 0534fefb3a..1e8004ee94 100755 --- a/doc/fix_npt_asphere.txt +++ b/doc/fix_npt_asphere.txt @@ -125,9 +125,9 @@ compute fix-ID_press group-ID pressure fix-ID_temp :pre See the "compute temp/asphere"_compute_temp_asphere.html and "compute pressure"_compute_pressure.html commands for details. Note that the -IDs of the new computes are the fix-ID with "_temp" or "_press" -appended and the group for the new computes is the same as the fix -group. +IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID ++ underscore + "press", and the group for the new computes is the same +as the fix group. Note that these are NOT the computes used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp} diff --git a/doc/fix_nvt.html b/doc/fix_nvt.html index 633041e133..44ea50ac1d 100644 --- a/doc/fix_nvt.html +++ b/doc/fix_nvt.html @@ -66,9 +66,9 @@ issued: 

compute fix-ID_temp group-ID temp
-

See the >compute temp command for details. Note -that the ID of the new compute is the fix-ID with appended and -the group for the new compute is the same as the fix group. +

See the compute temp command for details. Note +that the ID of the new compute is the fix-ID + underscore + "temp", +and the group for the new compute is the same as the fix group.

Note that this is NOT the compute used by thermodynamic output (see the thermo_style command) with ID = thermo_temp. @@ -120,7 +120,7 @@ the Nose/Hoover formulation.

fix nve, fix npt, fix temp/rescale, fix langevin, -fix_modify, temperature +fix_modify, compute temp

Default:

diff --git a/doc/fix_nvt.txt b/doc/fix_nvt.txt index cbd7efa79b..c4203492d5 100644 --- a/doc/fix_nvt.txt +++ b/doc/fix_nvt.txt @@ -58,8 +58,8 @@ issued: compute fix-ID_temp group-ID temp :pre See the "compute temp"_compute_temp.html command for details. Note -that the ID of the new compute is the fix-ID with "_temp" appended and -the group for the new compute is the same as the fix group. +that the ID of the new compute is the fix-ID + underscore + "temp", +and the group for the new compute is the same as the fix group. Note that this is NOT the compute used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp}. @@ -111,7 +111,7 @@ the Nose/Hoover formulation. "fix nve"_fix_nve.html, "fix npt"_fix_npt.html, "fix temp/rescale"_fix_temp_rescale.html, "fix langevin"_fix_langevin.html, -"fix_modify"_fix_modify.html, "temperature"_temperature.html +"fix_modify"_fix_modify.html, "compute temp"_compute_temp.html [Default:] diff --git a/doc/fix_nvt_asphere.html b/doc/fix_nvt_asphere.html index 06c09fdf9e..79019b75b4 100644 --- a/doc/fix_nvt_asphere.html +++ b/doc/fix_nvt_asphere.html @@ -67,10 +67,10 @@ had been issued: 

compute fix-ID_temp group-ID temp/asphere
-

See the >compute temp/asphere command for -details. Note that the ID of the new compute is the fix-ID with - appended and the group for the new compute is the same as the -fix group. +

See the compute temp/asphere command for +details. Note that the ID of the new compute is the fix-ID + +underscore + "temp", and the group for the new compute is the same as +the fix group.

Note that this is NOT the compute used by thermodynamic output (see the thermo_style command) with ID = thermo_temp. diff --git a/doc/fix_nvt_asphere.txt b/doc/fix_nvt_asphere.txt index 701bbf7051..5ec9bb0de7 100755 --- a/doc/fix_nvt_asphere.txt +++ b/doc/fix_nvt_asphere.txt @@ -59,9 +59,9 @@ had been issued: compute fix-ID_temp group-ID temp/asphere :pre See the "compute temp/asphere"_compute_temp_asphere.html command for -details. Note that the ID of the new compute is the fix-ID with -"_temp" appended and the group for the new compute is the same as the -fix group. +details. Note that the ID of the new compute is the fix-ID + +underscore + "temp", and the group for the new compute is the same as +the fix group. Note that this is NOT the compute used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp}. diff --git a/doc/fix_nvt_sllod.html b/doc/fix_nvt_sllod.html index 7d5b9fd2ad..c263b7251d 100644 --- a/doc/fix_nvt_sllod.html +++ b/doc/fix_nvt_sllod.html @@ -93,10 +93,10 @@ been issued: 

compute fix-ID_temp group-ID temp/deform
-

See the >compute temp/deform command for -details. Note that the ID of the new compute is the fix-ID with - appended and the group for the new compute is the same as the -fix group. +

See the compute temp/deform command for +details. Note that the ID of the new compute is the fix-ID + +underscore + "temp", and the group for the new compute is the same as +the fix group.

Note that this is NOT the compute used by thermodynamic output (see the thermo_style command) with ID = thermo_temp. @@ -147,7 +147,7 @@ the Nose/Hoover formulation.

fix nve, fix npt, fix npt, fix temp/rescale, fix langevin, fix_modify, -temperature +compute temp

Default:

diff --git a/doc/fix_nvt_sllod.txt b/doc/fix_nvt_sllod.txt index 776c1f7bd6..b155272861 100644 --- a/doc/fix_nvt_sllod.txt +++ b/doc/fix_nvt_sllod.txt @@ -85,9 +85,9 @@ been issued: compute fix-ID_temp group-ID temp/deform :pre See the "compute temp/deform"_compute_temp_deform.html command for -details. Note that the ID of the new compute is the fix-ID with -"_temp" appended and the group for the new compute is the same as the -fix group. +details. Note that the ID of the new compute is the fix-ID + +underscore + "temp", and the group for the new compute is the same as +the fix group. Note that this is NOT the compute used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp}. @@ -138,7 +138,7 @@ the Nose/Hoover formulation. "fix nve"_fix_nve.html, "fix npt"_fix_npt.html, "fix npt"_fix_npt.html, "fix temp/rescale"_fix_temp_rescale.html, "fix langevin"_fix_langevin.html, "fix_modify"_fix_modify.html, -"temperature"_temperature.html +"compute temp"_compute_temp.html [Default:] diff --git a/doc/fix_temp_rescale.html b/doc/fix_temp_rescale.html index 917ffc2ec4..5955be1e0e 100644 --- a/doc/fix_temp_rescale.html +++ b/doc/fix_temp_rescale.html @@ -78,10 +78,10 @@ compute fix-ID_temp group-ID temp/partial xflag yflag zflag

Which is used depends on whether the region or partial keywords were specified with the fix. See the compute temp, compute -temp/region, and >compute +temp/region, and compute temp/partial commands for details. Note -that the ID of the new compute is the fix-ID with appended and -the group for the new compute is the same as the fix group. +that the ID of the new compute is the fix-ID + underscore + "temp", +and the group for the new compute is the same as the fix group.

Note that this is NOT the compute used by thermodynamic output (see the thermo_style command) with ID = thermo_temp. diff --git a/doc/fix_temp_rescale.txt b/doc/fix_temp_rescale.txt index 7a2a581673..435fe1a25d 100644 --- a/doc/fix_temp_rescale.txt +++ b/doc/fix_temp_rescale.txt @@ -76,8 +76,8 @@ were specified with the fix. See the "compute temp"_compute_temp.html, "compute temp/region"_compute_temp_region.html, and "compute temp/partial"_compute_temp_partial.html commands for details. Note -that the ID of the new compute is the fix-ID with "_temp" appended and -the group for the new compute is the same as the fix group. +that the ID of the new compute is the fix-ID + underscore + "temp", +and the group for the new compute is the same as the fix group. Note that this is NOT the compute used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp}. diff --git a/doc/thermo_style.html b/doc/thermo_style.html index 0bcb6a9696..56d5ac5668 100644 --- a/doc/thermo_style.html +++ b/doc/thermo_style.html @@ -294,7 +294,8 @@ information.

Related commands:

thermo, thermo_modify, -fix_modify, temperature +fix_modify, compute temp, +compute pressure

Default:

diff --git a/doc/thermo_style.txt b/doc/thermo_style.txt index ea2264a5ae..df2177c0c9 100644 --- a/doc/thermo_style.txt +++ b/doc/thermo_style.txt @@ -288,7 +288,8 @@ This command must come after the simulation box is defined by a [Related commands:] "thermo"_thermo.html, "thermo_modify"_thermo_modify.html, -"fix_modify"_fix_modify.html, "temperature"_temperature.html +"fix_modify"_fix_modify.html, "compute temp"_compute_temp.html, +"compute pressure"_compute_pressure.html [Default:]