Examples:
-dump d0 all image 100 dump.*.jpg type type --
dump d1 mobile image 500 snap.*.png element element ssao yes 4539 0.6 --
dump d2 all image 200 img-*.ppm type type zoom 2.5 adiam 1.5 size 1280 720 --
dump m0 all movie 1000 movie.mpg type type size 640 480 --
dump m1 all movie 1000 movie.avi type type size 640 480 --
dump m2 all movie 100 movie.m4v type type zoom 1.8 adiam v_value size 1280 720 +dump d0 all image 100 dump.*.jpg type type +dump d1 mobile image 500 snap.*.png element element ssao yes 4539 0.6 +dump d2 all image 200 img-*.ppm type type zoom 2.5 adiam 1.5 size 1280 720 +dump m0 all movie 1000 movie.mpg type type size 640 480 +dump m1 all movie 1000 movie.avi type type size 640 480 +dump m2 all movie 100 movie.m4v type type zoom 1.8 adiam v_value size 1280 720Description:
@@ -105,6 +100,11 @@ below. Other dump styles store snapshots of numerical data asociated with atoms in various formats, as discussed on the dump doc page. +Note that a set of images or a movie can be made after a simulation +has been run, using the rerun command to read snapshots +from an existing dump file, and using these dump commands in the rerun +script to generate the images/movie. +
Here are two sample images, rendered as 1024x1024 JPG files. Click to see the full-size images:
diff --git a/doc/dump_image.txt b/doc/dump_image.txt index 24a8a23aab..135335ac16 100644 --- a/doc/dump_image.txt +++ b/doc/dump_image.txt @@ -65,11 +65,11 @@ keyword = {adiam} or {atom} or {bond} or {size} or {view} or {center} or {up} or [Examples:] -dump d0 all image 100 dump.*.jpg type type :pre -dump d1 mobile image 500 snap.*.png element element ssao yes 4539 0.6 :pre -dump d2 all image 200 img-*.ppm type type zoom 2.5 adiam 1.5 size 1280 720 :pre -dump m0 all movie 1000 movie.mpg type type size 640 480 :pre -dump m1 all movie 1000 movie.avi type type size 640 480 :pre +dump d0 all image 100 dump.*.jpg type type +dump d1 mobile image 500 snap.*.png element element ssao yes 4539 0.6 +dump d2 all image 200 img-*.ppm type type zoom 2.5 adiam 1.5 size 1280 720 +dump m0 all movie 1000 movie.mpg type type size 640 480 +dump m1 all movie 1000 movie.avi type type size 640 480 dump m2 all movie 100 movie.m4v type type zoom 1.8 adiam v_value size 1280 720 :pre [Description:] @@ -86,6 +86,11 @@ below. Other dump styles store snapshots of numerical data asociated with atoms in various formats, as discussed on the "dump"_dump.html doc page. +Note that a set of images or a movie can be made after a simulation +has been run, using the "rerun"_rerun.html command to read snapshots +from an existing dump file, and using these dump commands in the rerun +script to generate the images/movie. + Here are two sample images, rendered as 1024x1024 JPG files. Click to see the full-size images: diff --git a/doc/dump_modify.html b/doc/dump_modify.html index a366155888..c925654a84 100644 --- a/doc/dump_modify.html +++ b/doc/dump_modify.html @@ -125,20 +125,22 @@ parameters are relevant to all dump styles.
These keywords apply to various dump styles, including the dump -image style. The description gives details. +image and dump movie styles. The +description gives details.
The append keyword applies to all dump styles except cfg and xtc and dcd. It also applies only to text output files, not to binary -or gzipped files. If specified as yes, then dump snapshots are -appended to the end of an existing dump file. If specified as no, -then a new dump file will be created which will overwrite an existing -file with the same name. This keyword can only take effect if the -dump_modify command is used after the dump command, but -before the first command that causes dump snapshots to be output, -e.g. a run or minimize command. Once the -dump file has been opened, this keyword has no further effect. +or gzipped or image/movie files. If specified as yes, then dump +snapshots are appended to the end of an existing dump file. If +specified as no, then a new dump file will be created which will +overwrite an existing file with the same name. This keyword can only +take effect if the dump_modify command is used after the +dump command, but before the first command that causes +dump snapshots to be output, e.g. a run or +minimize command. Once the dump file has been opened, +this keyword has no further effect.
@@ -381,6 +383,8 @@ box size stored with the snapshot.
+
+These keywords apply only to the dump image and dump movie styles. Any keyword that affects an image, also affects a movie, since the movie is simply a collection of diff --git a/doc/dump_modify.txt b/doc/dump_modify.txt index 8fd7bdc079..dca28fdb2d 100644 --- a/doc/dump_modify.txt +++ b/doc/dump_modify.txt @@ -113,20 +113,22 @@ parameters are relevant to all dump styles. :line These keywords apply to various dump styles, including the "dump -image"_dump_image.html style. The description gives details. +image"_dump_image.html and "dump movie"_dump_image.html styles. The +description gives details. :line The {append} keyword applies to all dump styles except {cfg} and {xtc} and {dcd}. It also applies only to text output files, not to binary -or gzipped files. If specified as {yes}, then dump snapshots are -appended to the end of an existing dump file. If specified as {no}, -then a new dump file will be created which will overwrite an existing -file with the same name. This keyword can only take effect if the -dump_modify command is used after the "dump"_dump.html command, but -before the first command that causes dump snapshots to be output, -e.g. a "run"_run.html or "minimize"_minimize.html command. Once the -dump file has been opened, this keyword has no further effect. +or gzipped or image/movie files. If specified as {yes}, then dump +snapshots are appended to the end of an existing dump file. If +specified as {no}, then a new dump file will be created which will +overwrite an existing file with the same name. This keyword can only +take effect if the dump_modify command is used after the +"dump"_dump.html command, but before the first command that causes +dump snapshots to be output, e.g. a "run"_run.html or +"minimize"_minimize.html command. Once the dump file has been opened, +this keyword has no further effect. :line @@ -367,6 +369,7 @@ the coordinate would be if it had not been wrapped back into the periodic box. Note that these coordinates may thus be far outside the box size stored with the snapshot. +:line :line These keywords apply only to the "dump image"_dump_image.html and