From 24ff008a0f14cc5f77c152a8ca6e7dd9bb535d51 Mon Sep 17 00:00:00 2001 From: sjplimp Date: Fri, 23 Sep 2016 23:06:44 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15639 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/src/Section_commands.txt | 1 + doc/src/Section_tools.txt | 7 ++++--- 2 files changed, 5 insertions(+), 3 deletions(-) diff --git a/doc/src/Section_commands.txt b/doc/src/Section_commands.txt index 3e18037a83..91ec679360 100644 --- a/doc/src/Section_commands.txt +++ b/doc/src/Section_commands.txt @@ -501,6 +501,7 @@ USER-INTEL, k = KOKKOS, o = USER-OMP, t = OPT. "bond/create"_fix_bond_create.html, "bond/swap"_fix_bond_swap.html, "box/relax"_fix_box_relax.html, +"cmap"_fix_cmap.html, "controller"_fix_controller.html, "deform (k)"_fix_deform.html, "deposit"_fix_deposit.html, diff --git a/doc/src/Section_tools.txt b/doc/src/Section_tools.txt index 3527d228de..983be30f19 100644 --- a/doc/src/Section_tools.txt +++ b/doc/src/Section_tools.txt @@ -107,9 +107,10 @@ The ch2lmp sub-directory contains tools for converting files back-and-forth between the CHARMM MD code and LAMMPS. They are intended to make it easy to use CHARMM as a builder and as a -post-processor for LAMMPS. Using charmm2lammps.pl, you can convert an -ensemble built in CHARMM into its LAMMPS equivalent. Using -lammps2pdb.pl you can convert LAMMPS atom dumps into pdb files. +post-processor for LAMMPS. Using charmm2lammps.pl, you can convert a +PDB file with associated CHARMM info, including CHARMM force field +data, into its LAMMPS equivalent. Using lammps2pdb.pl you can convert +LAMMPS atom dumps into PDB files. See the README file in the ch2lmp sub-directory for more information.