From 274ffe1f4836447e5da879725a89c428e1689e8c Mon Sep 17 00:00:00 2001 From: Axel Kohlmeyer Date: Mon, 6 Dec 2021 14:07:36 -0500 Subject: [PATCH] Consolidate "Jiang" citations --- doc/src/Howto_drude2.rst | 5 ----- doc/src/fix_langevin_drude.rst | 4 ++-- doc/src/pair_sw.rst | 12 ++++++------ 3 files changed, 8 insertions(+), 13 deletions(-) diff --git a/doc/src/Howto_drude2.rst b/doc/src/Howto_drude2.rst index 589e9d7b9a..00289a989a 100644 --- a/doc/src/Howto_drude2.rst +++ b/doc/src/Howto_drude2.rst @@ -491,11 +491,6 @@ NPT ensemble using Nose-Hoover thermostat: **(Schroeder)** Schroeder and Steinhauser, J Chem Phys, 133, 154511 (2010). -.. _Jiang2: - -**(Jiang)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux, - J Phys Chem Lett, 2, 87-92 (2011). - .. _Thole2: **(Thole)** Chem Phys, 59, 341 (1981). diff --git a/doc/src/fix_langevin_drude.rst b/doc/src/fix_langevin_drude.rst index 89ea28cf08..5e62e4f416 100644 --- a/doc/src/fix_langevin_drude.rst +++ b/doc/src/fix_langevin_drude.rst @@ -40,7 +40,7 @@ Example input scripts available: examples/PACKAGES/drude Description """"""""""" -Apply two Langevin thermostats as described in :ref:`(Jiang) ` for +Apply two Langevin thermostats as described in :ref:`(Jiang1) ` for thermalizing the reduced degrees of freedom of Drude oscillators. This link describes how to use the :doc:`thermalized Drude oscillator model ` in LAMMPS and polarizable models in LAMMPS are discussed on the :doc:`Howto polarizable ` doc @@ -300,5 +300,5 @@ The option defaults are zero = no. .. _Jiang1: -**(Jiang)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux, J +**(Jiang1)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux, J Phys Chem Lett, 2, 87-92 (2011). diff --git a/doc/src/pair_sw.rst b/doc/src/pair_sw.rst index e3b1d533de..4dcba85806 100644 --- a/doc/src/pair_sw.rst +++ b/doc/src/pair_sw.rst @@ -78,7 +78,7 @@ The exclusion of unnecessary angles is achieved here by the cut-off function (`f which induces only minimum modifications for LAMMPS. Validation, benchmark tests, and applications of the *sw/mod* style -can be found in :ref:`(Jiang_1) ` and :ref:`(Jiang_2) `. +can be found in :ref:`(Jiang2) ` and :ref:`(Jiang3) `. The *sw/mod* style computes the energy E of a system of atoms, whose potential function is mostly the same as the Stillinger-Weber potential. The only modification @@ -285,10 +285,10 @@ style are `\delta_1 = 0.25` and `\delta_2 = 0.35`. **(Stillinger)** Stillinger and Weber, Phys Rev B, 31, 5262 (1985). -.. _Jiang1: - -**(Jiang_1)** J.-W. Jiang, Nanotechnology 26, 315706 (2015). - .. _Jiang2: -**(Jiang_2)** J.-W. Jiang, Acta Mech. Solida. Sin 32, 17 (2019). +**(Jiang2)** J.-W. Jiang, Nanotechnology 26, 315706 (2015). + +.. _Jiang3: + +**(Jiang3)** J.-W. Jiang, Acta Mech. Solida. Sin 32, 17 (2019).