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2015-12-10 17:23:56 +00:00
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>fix property/atom command &mdash; LAMMPS 15 May 2015 version documentation</title>
<title>fix property/atom command &mdash; LAMMPS 10 Dec 2015 version documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 15 May 2015 version documentation" href="index.html"/>
<link rel="top" title="LAMMPS 10 Dec 2015 version documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script>
@ -202,27 +202,26 @@ properties to also be defined for ghost atoms, then use the <em>ghost</em>
keyword with a value of <em>yes</em>. This will invoke extra communication
when ghost atoms are created (at every re-neighboring) to insure the
new properties are also defined for the ghost atoms.</p>
<div class="admonition warning">
<p class="first admonition-title">Warning</p>
<p class="last">If you use this command with the <em>mol</em> or <em>charge</em>
vectors than you most likely want to set <em>ghost</em> yes, since these
properties are stored with ghost atoms if you use an
<a class="reference internal" href="atom_style.html"><em>atom_style</em></a> that defines them, and many LAMMPS
operations that use molecule IDs or charge, such as neighbor lists and
pair styles, will expect ghost atoms to have these valuse. LAMMPS
will issue a warning it you define those vectors but do not set
<em>ghost</em> yes.</p>
<div class="admonition note">
<p class="first admonition-title">Note</p>
<p class="last">If you use this command with the <em>mol</em> or <em>charge</em> vectors than
you most likely want to set <em>ghost</em> yes, since these properties are
stored with ghost atoms if you use an <a class="reference internal" href="atom_style.html"><em>atom_style</em></a>
that defines them, and many LAMMPS operations that use molecule IDs or
charge, such as neighbor lists and pair styles, will expect ghost
atoms to have these valuse. LAMMPS will issue a warning it you define
those vectors but do not set <em>ghost</em> yes.</p>
</div>
<div class="admonition warning">
<p class="first admonition-title">Warning</p>
<p class="last">The properties for ghost atoms are not updated every
timestep, but only once every few steps when neighbor lists are
re-built. Thus the <em>ghost</em> keyword is suitable for static properties,
like molecule IDs, but not for dynamic properties that change every
step. For the latter, the code you add to LAMMPS to change the
properties will also need to communicate their new values to/from
ghost atoms, an operation that can be invoked from within a <a class="reference internal" href="pair_style.html"><em>pair style</em></a> or <a class="reference internal" href="fix.html"><em>fix</em></a> or <a class="reference internal" href="compute.html"><em>compute</em></a>
that you write.</p>
<div class="admonition note">
<p class="first admonition-title">Note</p>
<p class="last">The properties for ghost atoms are not updated every timestep,
but only once every few steps when neighbor lists are re-built. Thus
the <em>ghost</em> keyword is suitable for static properties, like molecule
IDs, but not for dynamic properties that change every step. For the
latter, the code you add to LAMMPS to change the properties will also
need to communicate their new values to/from ghost atoms, an operation
that can be invoked from within a <a class="reference internal" href="pair_style.html"><em>pair style</em></a> or
<a class="reference internal" href="fix.html"><em>fix</em></a> or <a class="reference internal" href="compute.html"><em>compute</em></a> that you write.</p>
</div>
<hr class="docutils" />
<p>This fix is one of a small number that can be defined in an input
@ -332,7 +331,7 @@ This fix is not invoked during <a class="reference internal" href="minimize.html
<div role="contentinfo">
<p>
&copy; Copyright .
&copy; Copyright 2013 Sandia Corporation.
</p>
</div>
Built with <a href="http://sphinx-doc.org/">Sphinx</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
@ -353,7 +352,7 @@ This fix is not invoked during <a class="reference internal" href="minimize.html
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./',
VERSION:'15 May 2015 version',
VERSION:'10 Dec 2015 version',
COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html',
HAS_SOURCE: true