git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3691 f3b2605a-c512-4ea7-a41b-209d697bcdaa

This commit is contained in:
sjplimp
2010-01-14 23:33:28 +00:00
parent 4a63d33e56
commit 2e51680815
90 changed files with 5491 additions and 5479 deletions

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LAMMPS (7 Jul 2009)
LAMMPS (15 Jan 2010)
# 2-d LJ flow simulation
dimension 2
@ -84,39 +84,39 @@ Step Temp E_pair E_mol TotEng Press Volume
500 1.0644427 -0.31382888 0 0.44395296 3.0018809 571.43371
1000 1 -0.42965445 0 0.28225032 2.9617821 571.43371
1500 1.0739874 -0.41189772 0 0.35267901 2.5626845 571.43371
2000 1 -0.40814277 0 0.30376199 2.9235162 571.43371
2500 1.1929962 -0.38734818 0 0.4619515 2.8343165 571.43371
3000 1 -0.44746792 0 0.26443684 2.6627188 571.43371
3500 1.010095 -0.40989137 0 0.30920005 2.5630541 571.43371
4000 1 -0.41152442 0 0.30038034 2.6280421 571.43371
4500 1.0014311 -0.38736161 0 0.32556193 2.4644773 571.43371
5000 1 -0.39407987 0 0.31782489 2.4614403 571.43371
5500 1.1069931 -0.45231944 0 0.3357542 2.4643506 571.43371
6000 1 -0.45436915 0 0.25753561 2.5746902 571.43371
6500 1.0330238 -0.38921069 0 0.34620389 2.7826579 571.43371
7000 1 -0.44431846 0 0.2675863 2.5673807 571.43371
7500 1.0140984 -0.46901787 0 0.25292361 2.3961693 571.43371
8000 1 -0.45965057 0 0.2522542 2.1341657 571.43371
8500 0.99284806 -0.43949501 0 0.26731825 2.3634229 571.43371
9000 1 -0.46508823 0 0.24681654 2.3230725 571.43371
9500 1.1114345 -0.4020811 0 0.3891544 2.559154 571.43371
10000 1.0176833 -0.42582303 0 0.29867054 2.5282372 571.43371
Loop time of 0.59033 on 1 procs for 10000 steps with 420 atoms
2000 1 -0.40814279 0 0.30376197 2.923516 571.43371
2500 1.1930756 -0.38494744 0 0.46440874 2.8344861 571.43371
3000 1 -0.45104936 0 0.2608554 2.6581476 571.43371
3500 1.1157229 -0.42511668 0 0.36917176 2.548283 571.43371
4000 0.99847156 -0.38248232 0 0.32833434 2.7743789 571.43371
4500 0.99986482 -0.40537662 0 0.30643191 2.5662059 571.43371
5000 0.98699088 -0.42972933 0 0.27291418 2.8700314 571.43371
5500 0.99529887 -0.4099323 0 0.2986257 2.6108218 571.43371
6000 1 -0.37315745 0 0.33874731 2.6162108 571.43371
6500 1.0875953 -0.43070589 0 0.34355841 2.4212644 571.43371
7000 1 -0.37770812 0 0.33419664 2.3471175 571.43371
7500 1.0225134 -0.39148836 0 0.33644382 2.3372521 571.43371
8000 1 -0.4303298 0 0.28157496 2.6649863 571.43371
8500 1.0059281 -0.47968607 0 0.23643894 2.2977497 571.43371
9000 1 -0.47706517 0 0.23483959 2.3965332 571.43371
9500 1.034152 -0.43908184 0 0.29713592 2.0674205 571.43371
10000 1 -0.42405289 0 0.28785187 2.0333283 571.43371
Loop time of 0.782033 on 1 procs for 10000 steps with 420 atoms
Pair time (%) = 0.21827 (36.9742)
Neigh time (%) = 0.066401 (11.2481)
Comm time (%) = 0.0182707 (3.095)
Outpt time (%) = 0.129952 (22.0134)
Other time (%) = 0.157437 (26.6692)
Pair time (%) = 0.213336 (27.2796)
Neigh time (%) = 0.0665166 (8.5056)
Comm time (%) = 0.0180633 (2.30979)
Outpt time (%) = 0.325799 (41.6604)
Other time (%) = 0.158319 (20.2446)
Nlocal: 420 ave 420 max 420 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost: 52 ave 52 max 52 min
Nghost: 50 ave 50 max 50 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs: 957 ave 957 max 957 min
Neighs: 955 ave 955 max 955 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Total # of neighbors = 957
Ave neighs/atom = 2.27857
Neighbor list builds = 994
Total # of neighbors = 955
Ave neighs/atom = 2.27381
Neighbor list builds = 992
Dangerous builds = 0

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LAMMPS (7 Jul 2009)
LAMMPS (15 Jan 2010)
# 2-d LJ flow simulation
dimension 2
@ -84,39 +84,39 @@ Step Temp E_pair E_mol TotEng Press Volume
500 1.0951876 -0.33403931 0 0.44562996 3.2508527 571.43371
1000 1 -0.3731019 0 0.33880286 2.856717 571.43371
1500 1.0366879 -0.36031105 0 0.37771198 3.0202123 571.43371
2000 1 -0.41052951 0 0.30137525 2.8657415 571.43371
2500 1.1228466 -0.37043294 0 0.42892693 2.9450302 571.43371
3000 1 -0.37926849 0 0.33263627 2.5756937 571.43371
3500 1.0426371 -0.46446342 0 0.27779493 2.6309178 571.43371
4000 1 -0.43996746 0 0.2719373 2.7108953 571.43371
4500 0.97471021 -0.43234275 0 0.26155809 2.4118441 571.43371
5000 1 -0.38709789 0 0.32480687 2.6100243 571.43371
5500 1.0551901 -0.42334943 0 0.32784545 2.4333785 571.43371
6000 1 -0.45014484 0 0.26175993 2.5188073 571.43371
6500 1.0439428 -0.46442749 0 0.27876034 2.2352899 571.43371
7000 1 -0.42616126 0 0.2857435 2.4560563 571.43371
7500 1.0680429 -0.41282904 0 0.34751579 2.5532595 571.43371
8000 1 -0.44461273 0 0.26729203 2.1838508 571.43371
8500 1.0212571 -0.43065547 0 0.29638229 2.2193889 571.43371
9000 1 -0.43364252 0 0.27826224 2.4244927 571.43371
9500 1.1269004 -0.48721451 0 0.31503125 2.3601218 571.43371
10000 1 -0.50814904 0 0.20375572 2.3234126 571.43371
Loop time of 3.45458 on 4 procs for 10000 steps with 420 atoms
2000 1 -0.41052955 0 0.30137522 2.8657413 571.43371
2500 1.1228407 -0.37042187 0 0.4289338 2.945087 571.43371
3000 1 -0.38445437 0 0.32745039 2.5940132 571.43371
3500 0.98347805 -0.45261096 0 0.24753175 2.7993099 571.43371
4000 1 -0.4065517 0 0.30535307 2.6210066 571.43371
4500 1.1209102 -0.40962998 0 0.38835132 2.4000886 571.43371
5000 1 -0.41496008 0 0.29694469 2.4655161 571.43371
5500 0.97933303 -0.39271136 0 0.30448049 2.7152128 571.43371
6000 1 -0.3939977 0 0.31790706 2.4334363 571.43371
6500 1.0519775 -0.50040975 0 0.24849803 2.5037073 571.43371
7000 1 -0.42318431 0 0.28872046 2.467848 571.43371
7500 1.1143879 -0.41498175 0 0.37835632 2.4540473 571.43371
8000 1 -0.46010124 0 0.25180353 2.5558114 571.43371
8500 1.0240867 -0.45394562 0 0.27510657 2.4271829 571.43371
9000 1 -0.4381772 0 0.27372756 2.4112541 571.43371
9500 1.0233668 -0.40460424 0 0.32393546 2.4071091 571.43371
10000 1 -0.4130336 0 0.29887116 2.3859891 571.43371
Loop time of 3.50719 on 4 procs for 10000 steps with 420 atoms
Pair time (%) = 0.0726623 (2.10336)
Neigh time (%) = 0.0228513 (0.661479)
Comm time (%) = 2.63741 (76.3452)
Outpt time (%) = 0.164288 (4.75566)
Other time (%) = 0.55737 (16.1343)
Pair time (%) = 0.0712182 (2.03064)
Neigh time (%) = 0.0222434 (0.634224)
Comm time (%) = 2.6781 (76.3603)
Outpt time (%) = 0.162613 (4.63657)
Other time (%) = 0.573015 (16.3383)
Nlocal: 105 ave 116 max 93 min
Histogram: 1 1 0 0 0 0 0 0 0 2
Nghost: 40.25 ave 43 max 36 min
Nlocal: 105 ave 113 max 93 min
Histogram: 1 0 0 0 1 0 0 0 0 2
Neighs: 238.75 ave 307 max 175 min
Histogram: 2 0 0 0 0 0 0 0 0 2
Nghost: 41.5 ave 48 max 34 min
Histogram: 1 0 0 0 0 1 1 0 0 1
Neighs: 235.25 ave 295 max 177 min
Histogram: 1 1 0 0 0 0 0 0 1 1
Total # of neighbors = 955
Ave neighs/atom = 2.27381
Neighbor list builds = 967
Total # of neighbors = 941
Ave neighs/atom = 2.24048
Neighbor list builds = 964
Dangerous builds = 0

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LAMMPS (7 Jul 2009)
LAMMPS (15 Jan 2010)
# 2-d LJ flow simulation
dimension 2
@ -87,36 +87,36 @@ Step Temp E_pair E_mol TotEng Press Volume
2000 1 -0.39956949 0 0.31233527 1.2499009 582.89761
2500 1.2236323 -0.40128446 0 0.46982521 1.4279626 569.92814
3000 1 -0.48849341 0 0.22341135 1.5094342 553.53722
3500 1.2404529 -0.63017441 0 0.25290988 1.7684925 535.11692
4000 1 -0.71550459 0 -0.0035998233 2.2080667 516.62241
4500 1.2252925 -0.76523375 0 0.10705778 2.6150526 503.09392
5000 1 -0.79183795 0 -0.079933193 3.0396463 499.00782
5500 1.2154662 -0.76641284 0 0.098883321 2.5749248 501.79835
6000 1 -0.64579024 0 0.066114526 2.1632023 511.927
6500 1.2040094 -0.67569325 0 0.18144675 1.988296 515.52367
7000 1 -0.67495483 0 0.036949936 1.8145292 515.56679
7500 1.224424 -0.70211643 0 0.16955688 1.9563915 513.39341
8000 1 -0.68750419 0 0.024400573 2.2133264 508.15889
8500 1.1991285 -0.81030024 0 0.04336508 2.5391079 501.58914
9000 1 -0.79950245 0 -0.087597685 2.5700917 498.68874
9500 1.2060053 -0.68460543 0 0.17395548 2.4774286 501.9809
10000 1 -0.7187822 0 -0.0068774412 2.1346851 507.66533
Loop time of 0.767843 on 1 procs for 10000 steps with 420 atoms
3500 1.2404531 -0.63017461 0 0.25290984 1.7684919 535.11692
4000 1 -0.71551408 0 -0.0036093194 2.2079801 516.62236
4500 1.2253142 -0.76279403 0 0.10951296 2.6160527 503.09551
5000 1 -0.79031676 0 -0.078411998 3.0921313 499.00007
5500 1.2025712 -0.74032174 0 0.11579442 2.5892112 502.06255
6000 1 -0.6581062 0 0.053798563 2.0984473 510.32132
6500 1.2126636 -0.65632165 0 0.20697931 2.0771501 515.46227
7000 1 -0.68607157 0 0.02583319 1.9548014 518.03757
7500 1.2318514 -0.64168507 0 0.23527579 1.8621166 515.41686
8000 1 -0.69622159 0 0.015683171 2.1564483 508.61671
8500 1.2204376 -0.74071986 0 0.12811549 2.3967887 501.80266
9000 1 -0.79193368 0 -0.080028922 2.4413256 499.77059
9500 1.2151255 -0.75195108 0 0.11310255 2.4315907 500.33116
10000 1 -0.76066018 0 -0.048755416 2.4113886 502.50751
Loop time of 0.775575 on 1 procs for 10000 steps with 420 atoms
Pair time (%) = 0.240073 (31.266)
Neigh time (%) = 0.0380447 (4.95475)
Comm time (%) = 0.0155265 (2.0221)
Outpt time (%) = 0.258772 (33.7012)
Other time (%) = 0.215426 (28.056)
Pair time (%) = 0.233373 (30.0904)
Neigh time (%) = 0.0400939 (5.16957)
Comm time (%) = 0.0160425 (2.06846)
Outpt time (%) = 0.257045 (33.1425)
Other time (%) = 0.22902 (29.5291)
Nlocal: 420 ave 420 max 420 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost: 50 ave 50 max 50 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs: 1126 ave 1126 max 1126 min
Neighs: 1124 ave 1124 max 1124 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Total # of neighbors = 1126
Ave neighs/atom = 2.68095
Neighbor list builds = 560
Total # of neighbors = 1124
Ave neighs/atom = 2.67619
Neighbor list builds = 562
Dangerous builds = 0

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LAMMPS (7 Jul 2009)
LAMMPS (15 Jan 2010)
# 2-d LJ flow simulation
dimension 2
@ -85,38 +85,38 @@ Step Temp E_pair E_mol TotEng Press Volume
1000 1 -0.35701441 0 0.35489035 2.0579148 585.60492
1500 1.2368663 -0.37709732 0 0.50343367 1.4868643 587.08385
2000 1 -0.39362939 0 0.31827537 1.4238684 578.83266
2500 1.2272957 -0.423819 0 0.44989865 1.4547395 570.04942
3000 1 -0.49143404 0 0.22047072 1.5348968 554.87718
3500 1.2444907 -0.59761795 0 0.28834088 1.8757604 536.90691
4000 1 -0.70134359 0 0.010561171 2.1398674 521.35908
4500 1.2204821 -0.74251795 0 0.1263491 2.7628995 507.52799
5000 1 -0.77812124 0 -0.066216477 2.9593453 500.99765
5500 1.2036047 -0.76286922 0 0.093982666 2.6929974 506.25167
6000 1 -0.77204718 0 -0.060142418 2.4240012 509.91665
6500 1.2142987 -0.71937137 0 0.14509369 2.2503511 517.34969
7000 1 -0.65416249 0 0.057742269 2.147319 518.76914
7500 1.2280812 -0.68399882 0 0.19027806 2.0299907 517.0026
8000 1 -0.71589339 0 -0.0039886296 2.2415408 513.76983
8500 1.2274811 -0.70229467 0 0.17155497 2.1849604 512.25569
9000 1 -0.75920668 0 -0.047301917 2.4592389 508.74337
9500 1.2470681 -0.69158384 0 0.1962099 2.1530665 508.86868
10000 1 -0.74646656 0 -0.034561799 2.3332271 509.78267
Loop time of 4.41382 on 4 procs for 10000 steps with 420 atoms
2500 1.2272957 -0.423819 0 0.44989866 1.4547395 570.04942
3000 1 -0.49143403 0 0.22047073 1.5348969 554.87718
3500 1.2444908 -0.597618 0 0.2883409 1.8757604 536.90691
4000 1 -0.70133089 0 0.010573874 2.1399937 521.35928
4500 1.2212572 -0.74525028 0 0.12416857 2.7605953 507.52559
5000 1 -0.77887442 0 -0.066969662 2.9849792 501.10169
5500 1.2118683 -0.76479769 0 0.097937148 2.7555194 505.25255
6000 1 -0.64166654 0 0.070238224 2.4653816 510.17292
6500 1.2230732 -0.66072614 0 0.20998549 2.0855543 517.97007
7000 1 -0.61750407 0 0.094400687 1.9316563 520.97755
7500 1.2289276 -0.68159213 0 0.19328728 2.0003789 520.18556
8000 1 -0.69786226 0 0.014042499 2.1485637 517.24977
8500 1.2206044 -0.75028089 0 0.11867321 2.3924356 513.28362
9000 1 -0.75191705 0 -0.040012285 2.521768 509.91505
9500 1.2149548 -0.71491732 0 0.15001477 2.3827722 508.86228
10000 1 -0.71239141 0 -0.00048664424 2.3193862 508.75244
Loop time of 4.51908 on 4 procs for 10000 steps with 420 atoms
Pair time (%) = 0.0798401 (1.80886)
Neigh time (%) = 0.013763 (0.311815)
Comm time (%) = 2.65315 (60.11)
Outpt time (%) = 0.310198 (7.02788)
Other time (%) = 1.35687 (30.7415)
Pair time (%) = 0.0766262 (1.69562)
Neigh time (%) = 0.0136825 (0.302772)
Comm time (%) = 2.73289 (60.4745)
Outpt time (%) = 0.308516 (6.82697)
Other time (%) = 1.38736 (30.7001)
Nlocal: 105 ave 107 max 103 min
Histogram: 1 0 1 0 0 0 0 1 0 1
Nghost: 44.75 ave 49 max 41 min
Histogram: 1 1 0 0 0 0 0 1 0 1
Neighs: 278 ave 296 max 259 min
Histogram: 1 0 0 0 1 0 1 0 0 1
Nlocal: 105 ave 107 max 104 min
Histogram: 2 0 0 1 0 0 0 0 0 1
Nghost: 43.5 ave 45 max 42 min
Histogram: 1 0 0 1 0 0 1 0 0 1
Neighs: 279.5 ave 296 max 265 min
Histogram: 2 0 0 0 0 0 0 1 0 1
Total # of neighbors = 1112
Ave neighs/atom = 2.64762
Total # of neighbors = 1118
Ave neighs/atom = 2.6619
Neighbor list builds = 565
Dangerous builds = 0