update version tag placeholders for added, removed, or changed functionality

2022-12-19 22:11:06 -05:00
parent fd41ea9eae
commit 2e6b975878
14 changed files with 31 additions and 31 deletions
--- a/doc/src/Commands_removed.rst
+++ b/doc/src/Commands_removed.rst
@ -23,7 +23,7 @@ Please refer to the :doc:`chunk HOWTO <Howto_chunk>` section for an overview.
 Box command
 -----------

-.. deprecated:: TBD
+.. deprecated:: 22Dec2022

 The *box* command has been removed and the LAMMPS code changed so it won't
 be needed.  If present, LAMMPS will ignore the command and print a warning.
@ -31,7 +31,7 @@ be needed.  If present, LAMMPS will ignore the command and print a warning.
 Reset_ids, reset_atom_ids, reset_mol_ids commands
 -------------------------------------------------

-.. deprecated:: TBD
+.. deprecated:: 22Dec2022

 The *reset_ids*, *reset_atom_ids*, and *reset_mol_ids* commands have
 been folded into the :doc:`reset_atoms <reset_atoms>` command.  If
--- a/doc/src/Developer_grid.rst
+++ b/doc/src/Developer_grid.rst
@ -1,7 +1,7 @@
 Use of distributed grids within style classes
 ---------------------------------------------

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The LAMMPS source code includes two classes which facilitate the
 creation and use of distributed grids.  These are the Grid2d and
--- a/doc/src/Fortran.rst
+++ b/doc/src/Fortran.rst
@ -1525,7 +1525,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Gather the named per-atom, per-atom fix, per-atom compute, or fix
   property/atom-based entities from all processes, in order by atom ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This subroutine gathers data from all processes and stores them in a
   one-dimensional allocatable array. The array *data* will be
@ -1567,7 +1567,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Gather the named per-atom, per-atom fix, per-atom compute, or fix
   property/atom-based entities from all processes, unordered.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This subroutine gathers data for all atoms and stores them in a
   one-dimensional allocatable array. The data will be a
@ -1613,7 +1613,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Gather the named per-atom, per-atom fix, per-atom compute, or fix
   property/atom-based entities from all processes for a subset of atoms.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This subroutine gathers data for the requested atom IDs and stores them in a
   one-dimensional allocatable array. The data will be ordered by atom ID, but
@ -1661,7 +1661,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   per-atom, per-atom fix, per-atom compute, or fix property/atom-based entity
   in *data* to all processes.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This subroutine takes data stored in a one-dimensional array supplied by the
   user and scatters them to all atoms on all processes. The data must be
@ -1694,7 +1694,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   per-atom, per-atom fix, per-atom compute, or fix property/atom-based
   entities in *data* from a subset of atoms to all processes.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This subroutine takes data stored in a one-dimensional array supplied by the
   user and scatters them to a subset of atoms on all processes. The array
@ -2381,7 +2381,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Set the callback function for a :doc:`fix external <fix_external>` instance
   with the given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   Fix :doc:`external <fix_external>` allows programs that are running LAMMPS
   through its library interface to modify certain LAMMPS properties on
@ -2497,7 +2497,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Get pointer to the force array storage in a fix external instance with the
   given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   Fix :doc:`external <fix_external>` allows programs that are running LAMMPS
   through its library interfaces to add or modify certain LAMMPS properties on
@ -2541,7 +2541,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Set the global energy contribution for a :doc:`fix external <fix_external>`
   instance with the given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This is a companion function to :f:func:`set_fix_external_callback`
   and :f:func:`fix_external_get_force` that also sets the contribution to the
@ -2569,7 +2569,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Set the global virial contribution for a fix external instance with the
   given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This is a companion function to :f:subr:`set_fix_external_callback`
   and :f:func:`fix_external_get_force` to set the contribution to the global
@ -2601,7 +2601,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Set the per-atom energy contribution for a fix external instance with the
   given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This is a companion function to :f:subr:`set_fix_external_callback` to set
   the per-atom energy contribution due to the fix from the external program as
@ -2636,7 +2636,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   part of the callback function.  For this to work, the LAMMPS object must be
   passed as the *caller* argument when registering the callback function.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   .. note::

@ -2666,7 +2666,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type
   Set the vector length for a global vector stored with fix external for
   analysis.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This is a companion function to :f:subr:`set_fix_external_callback` and
   :f:func:`fix_external_get_force` to set the length of a global vector of
@ -2693,7 +2693,7 @@ Procedures Bound to the :f:type:`lammps` Derived Type

   Store a global vector value for a fix external instance with the given ID.

-   .. versionadded:: TBD
+   .. versionadded:: 22Dec2022

   This is a companion function to :f:subr:`set_fix_external_callback` and
   :f:func:`fix_external_get_force` to set the values of a global vector of
--- a/doc/src/Howto_grid.rst
+++ b/doc/src/Howto_grid.rst
@ -1,7 +1,7 @@
 Distributed grids
 =================

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 LAMMPS has internal capabilities to create uniformly spaced grids
 which overlay the simulation domain.  For 2d and 3d simulations these
--- a/doc/src/Packages_details.rst
+++ b/doc/src/Packages_details.rst
@ -1816,7 +1816,7 @@ fitting the potentials natively in LAMMPS.

 Ngoc Cuong Nguyen (MIT), Andrew Rohskopf (Sandia)

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 **Install:**

--- a/doc/src/Tools.rst
+++ b/doc/src/Tools.rst
@ -1164,7 +1164,7 @@ For illustration purposes below is a part of the Tcl example script.
 tabulate tool
 --------------

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The ``tabulate`` folder contains Python scripts scripts to generate tabulated
 potential files for LAMMPS.  The bulk of the code is in the ``tabulate`` module
--- a/doc/src/dump.rst
+++ b/doc/src/dump.rst
@ -346,7 +346,7 @@ so atom attributes will include effects due to fixes that are applied
 during the timestep.  An explanation of the possible dump custom
 attributes is given below.

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 For style *grid* the extent of the Nx by Ny by Nz grid that overlays
 the simulation domain is output with each snapshot:
@ -450,7 +450,7 @@ from using the (numerical) atom type to an element name (or some other
 label). This will help many visualization programs to guess bonds and
 colors.

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The *grid/vtk* style writes VTK files for grid data on a regular
 rectilinear grid.  Its content is conceptually similar to that of the
--- a/doc/src/fitpod_command.rst
+++ b/doc/src/fitpod_command.rst
@ -23,7 +23,7 @@ Examples

 Description
 """""""""""
-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 Fit a machine-learning interatomic potential (ML-IAP) based on proper
 orthogonal descriptors (POD).  Two input files are required for this
--- a/doc/src/fix_bond_react.rst
+++ b/doc/src/fix_bond_react.rst
@ -520,7 +520,7 @@ example, the molecule fragment could consist of only the backbone
 atoms of a polymer chain. This constraint can be used to enforce a
 specific relative position and orientation between reacting molecules.

-.. versionchanged:: TBD
+.. versionchanged:: 22Dec2022

 The constraint of type "custom" has the following syntax:

@ -637,7 +637,7 @@ eligible reaction only occurs if the random number is less than the
 fraction. Up to :math:`N` reactions are permitted to occur, as optionally
 specified by the *max_rxn* keyword.

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The *rate_limit* keyword can enforce an upper limit on the overall
 rate of the reaction. The number of reaction occurrences is limited to
@ -664,7 +664,7 @@ charges are updated to those specified by the post-reaction template
 fragment defined in the pre-reaction molecule template. In this case,
 only the atomic charges of atoms in the molecule fragment are updated.

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The *rescale_charges* keyword can be used to ensure the total charge
 of the system does not change as reactions occur. When the argument is
--- a/doc/src/fix_electrode.rst
+++ b/doc/src/fix_electrode.rst
@ -125,7 +125,7 @@ usually modelled as a Gaussian distribution to make the charge-charge
 interaction matrix invertible (:ref:`Gingrich <Gingrich>`).  The keyword
 *eta* specifies the distribution's width in units of inverse length.

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 Three algorithms are available to minimize the energy, varying in how
 matrices are pre-calculated before a run to provide computational
@ -234,7 +234,7 @@ issue an error with any other number of electrodes. This keyword
 requires electroneutrality to be imposed (*symm on*) and will issue an
 error otherwise.

-.. versionchanged:: TBD
+.. versionchanged:: 22Dec2022

 For all versions of the fix, the keyword-value *etypes on* enables
 type-based optimized neighbor lists. With this feature enabled, LAMMPS
--- a/doc/src/fix_sgcmc.rst
+++ b/doc/src/fix_sgcmc.rst
@ -44,7 +44,7 @@ Examples
 Description
 """""""""""

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 This command allows to carry out parallel hybrid molecular
 dynamics/Monte Carlo (MD/MC) simulations using the algorithms described
--- a/doc/src/pair_pod.rst
+++ b/doc/src/pair_pod.rst
@ -21,7 +21,7 @@ Examples
 Description
 """""""""""

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 Pair style *pod* defines the proper orthogonal descriptor (POD)
 potential :ref:`(Nguyen) <Nguyen20221>`.  The mathematical definition of
--- a/doc/src/python.rst
+++ b/doc/src/python.rst
@ -129,7 +129,7 @@ The first argument of the *python* command is either the *source*
 keyword or the name of a Python function.  This defines the mode
 of the python command.

-.. versionchanged:: TBD
+.. versionchanged:: 22Dec2022

 If the *source* keyword is used, it is followed by either a file name or
 the *here* keyword.  No other keywords can be used.  The *here* keyword
--- a/doc/src/reset_atoms.rst
+++ b/doc/src/reset_atoms.rst
@ -63,7 +63,7 @@ Examples
 Description
 """""""""""

-.. versionadded:: TBD
+.. versionadded:: 22Dec2022

 The *reset_atoms* command resets the values of a specified atom
 property.  In contrast to the set command, it does this in a