Update Kokkos library in LAMMPS to v4.2
This commit is contained in:
Stan Gerald Moore
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//@HEADER
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// ************************************************************************
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//
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// Kokkos v. 4.0
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// Copyright (2022) National Technology & Engineering
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// Solutions of Sandia, LLC (NTESS).
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//
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// Under the terms of Contract DE-NA0003525 with NTESS,
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// the U.S. Government retains certain rights in this software.
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//
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// Part of Kokkos, under the Apache License v2.0 with LLVM Exceptions.
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// See https://kokkos.org/LICENSE for license information.
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// SPDX-License-Identifier: Apache-2.0 WITH LLVM-exception
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//
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//@HEADER
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#include <TestStdAlgorithmsCommon.hpp>
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namespace Test {
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namespace stdalgos {
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namespace TeamFindFirstOf {
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namespace KE = Kokkos::Experimental;
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template <class ValueType>
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struct EqualFunctor {
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KOKKOS_INLINE_FUNCTION
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bool operator()(const ValueType& lhs, const ValueType& rhs) const {
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return lhs == rhs;
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}
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};
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template <class DataViewType, class SearchedSequencesViewType,
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class DistancesViewType, class IntraTeamSentinelView,
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class BinaryPredType>
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struct TestFunctorA {
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DataViewType m_dataView;
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SearchedSequencesViewType m_searchedSequencesView;
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DistancesViewType m_distancesView;
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IntraTeamSentinelView m_intraTeamSentinelView;
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BinaryPredType m_binaryPred;
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int m_apiPick;
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TestFunctorA(const DataViewType dataView,
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const SearchedSequencesViewType searchedSequencesView,
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const DistancesViewType distancesView,
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const IntraTeamSentinelView intraTeamSentinelView,
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BinaryPredType binaryPred, int apiPick)
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: m_dataView(dataView),
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m_searchedSequencesView(searchedSequencesView),
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m_distancesView(distancesView),
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m_intraTeamSentinelView(intraTeamSentinelView),
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m_binaryPred(binaryPred),
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m_apiPick(apiPick) {}
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template <class MemberType>
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KOKKOS_INLINE_FUNCTION void operator()(const MemberType& member) const {
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const auto myRowIndex = member.league_rank();
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auto myRowViewFrom = Kokkos::subview(m_dataView, myRowIndex, Kokkos::ALL());
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auto myRowSearchedSeqView =
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Kokkos::subview(m_searchedSequencesView, myRowIndex, Kokkos::ALL());
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ptrdiff_t resultDist = 0;
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switch (m_apiPick) {
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case 0: {
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auto it = KE::find_first_of(
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member, KE::cbegin(myRowViewFrom), KE::cend(myRowViewFrom),
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KE::cbegin(myRowSearchedSeqView), KE::cend(myRowSearchedSeqView));
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resultDist = KE::distance(KE::cbegin(myRowViewFrom), it);
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Kokkos::single(Kokkos::PerTeam(member), [=, *this]() {
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m_distancesView(myRowIndex) = resultDist;
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});
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break;
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}
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case 1: {
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auto it =
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KE::find_first_of(member, myRowViewFrom, myRowSearchedSeqView);
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resultDist = KE::distance(KE::begin(myRowViewFrom), it);
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Kokkos::single(Kokkos::PerTeam(member), [=, *this]() {
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m_distancesView(myRowIndex) = resultDist;
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});
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break;
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}
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case 2: {
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auto it = KE::find_first_of(
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member, KE::cbegin(myRowViewFrom), KE::cend(myRowViewFrom),
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KE::cbegin(myRowSearchedSeqView), KE::cend(myRowSearchedSeqView),
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m_binaryPred);
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resultDist = KE::distance(KE::cbegin(myRowViewFrom), it);
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Kokkos::single(Kokkos::PerTeam(member), [=, *this]() {
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m_distancesView(myRowIndex) = resultDist;
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});
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break;
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}
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case 3: {
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auto it = KE::find_first_of(member, myRowViewFrom, myRowSearchedSeqView,
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m_binaryPred);
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resultDist = KE::distance(KE::begin(myRowViewFrom), it);
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Kokkos::single(Kokkos::PerTeam(member), [=, *this]() {
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m_distancesView(myRowIndex) = resultDist;
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});
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break;
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}
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}
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// store result of checking if all members have their local
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// values matching the one stored in m_distancesView
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member.team_barrier();
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const bool intraTeamCheck = team_members_have_matching_result(
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member, resultDist, m_distancesView(myRowIndex));
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Kokkos::single(Kokkos::PerTeam(member), [=, *this]() {
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m_intraTeamSentinelView(myRowIndex) = intraTeamCheck;
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});
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}
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};
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template <class LayoutTag, class ValueType>
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void test_A(const bool sequencesExist, std::size_t numTeams,
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std::size_t numCols, int apiId) {
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/* description:
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use a rank-2 view randomly filled with values,
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and run a team-level find_first_of
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*/
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// -----------------------------------------------
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// prepare data
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// -----------------------------------------------
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// create a view in the memory space associated with default exespace
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// with as many rows as the number of teams and fill it with random
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// values from an arbitrary range.
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constexpr ValueType lowerBound = 5;
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constexpr ValueType upperBound = 523;
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const auto bounds = make_bounds(lowerBound, upperBound);
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auto [dataView, dataViewBeforeOp_h] = create_random_view_and_host_clone(
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LayoutTag{}, numTeams, numCols, bounds, "dataView");
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// create a view that stores a sequence to found a value from in dataView. If
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// sequencesExist == true it is filled base on dataView content, to allow
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// find_first_of to actually find anything. If sequencesExist == false it is
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// filled with random values greater than upperBound
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const std::size_t halfCols = (numCols > 1) ? ((numCols + 1) / 2) : (1);
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const std::size_t seqSize = (numCols > 1) ? (std::log2(numCols)) : (1);
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Kokkos::View<ValueType**> searchedSequencesView("searchedSequencesView",
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numTeams, seqSize);
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auto searchedSequencesView_h = create_host_space_copy(searchedSequencesView);
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if (sequencesExist) {
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const std::size_t dataBegin = halfCols - seqSize;
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for (std::size_t i = 0; i < searchedSequencesView_h.extent(0); ++i) {
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for (std::size_t js = 0, jd = dataBegin; js < seqSize; ++js, ++jd) {
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searchedSequencesView_h(i, js) = dataViewBeforeOp_h(i, jd);
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}
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}
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} else {
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using rand_pool =
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Kokkos::Random_XorShift64_Pool<Kokkos::DefaultHostExecutionSpace>;
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rand_pool pool(lowerBound * upperBound);
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Kokkos::fill_random(searchedSequencesView_h, pool, upperBound,
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upperBound * 2);
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}
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Kokkos::deep_copy(searchedSequencesView, searchedSequencesView_h);
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// -----------------------------------------------
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// launch kokkos kernel
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// -----------------------------------------------
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using space_t = Kokkos::DefaultExecutionSpace;
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Kokkos::TeamPolicy<space_t> policy(numTeams, Kokkos::AUTO());
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// find_first_of returns an iterator so to verify that it is correct
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// each team stores the distance of the returned iterator from the
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// beginning of the interval that team operates on and then we check
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// that these distances match the std result
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Kokkos::View<std::size_t*> distancesView("distancesView", numTeams);
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// sentinel to check if all members of the team compute the same result
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Kokkos::View<bool*> intraTeamSentinelView("intraTeamSameResult", numTeams);
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EqualFunctor<ValueType> binaryPred;
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// use CTAD for functor
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TestFunctorA fnc(dataView, searchedSequencesView, distancesView,
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intraTeamSentinelView, binaryPred, apiId);
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Kokkos::parallel_for(policy, fnc);
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// -----------------------------------------------
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// run cpp-std kernel and check
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// -----------------------------------------------
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auto distancesView_h = create_host_space_copy(distancesView);
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auto intraTeamSentinelView_h = create_host_space_copy(intraTeamSentinelView);
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for (std::size_t i = 0; i < dataView.extent(0); ++i) {
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auto rowFrom = Kokkos::subview(dataViewBeforeOp_h, i, Kokkos::ALL());
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auto rowSearchedSeq =
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Kokkos::subview(searchedSequencesView_h, i, Kokkos::ALL());
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const auto rowFromBegin = KE::cbegin(rowFrom);
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const auto rowFromEnd = KE::cend(rowFrom);
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const auto rowSearchedBegin = KE::cbegin(rowSearchedSeq);
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const auto rowSearchedEnd = KE::cend(rowSearchedSeq);
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const std::size_t beginEndDistance = KE::distance(rowFromBegin, rowFromEnd);
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ASSERT_TRUE(intraTeamSentinelView_h(i));
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switch (apiId) {
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case 0:
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case 1: {
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auto it = std::find_first_of(rowFromBegin, rowFromEnd, rowSearchedBegin,
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rowSearchedEnd);
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const std::size_t stdDistance = KE::distance(rowFromBegin, it);
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if (sequencesExist) {
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EXPECT_LT(distancesView_h(i), beginEndDistance);
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} else {
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ASSERT_EQ(distancesView_h(i), beginEndDistance);
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}
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ASSERT_EQ(stdDistance, distancesView_h(i));
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break;
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}
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case 2:
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case 3: {
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auto it = std::find_first_of(rowFromBegin, rowFromEnd, rowSearchedBegin,
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rowSearchedEnd, binaryPred);
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const std::size_t stdDistance = KE::distance(rowFromBegin, it);
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if (sequencesExist) {
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EXPECT_LT(distancesView_h(i), beginEndDistance);
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} else {
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ASSERT_EQ(distancesView_h(i), beginEndDistance);
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}
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ASSERT_EQ(stdDistance, distancesView_h(i));
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break;
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}
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}
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}
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}
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template <class LayoutTag, class ValueType>
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void run_all_scenarios(const bool sequencesExist) {
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for (int numTeams : teamSizesToTest) {
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for (const auto& numCols : {1, 2, 13, 101, 1444, 8153}) {
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for (int apiId : {0, 1, 2, 3}) {
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test_A<LayoutTag, ValueType>(sequencesExist, numTeams, numCols, apiId);
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}
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}
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}
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}
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TEST(std_algorithms_find_first_of_team_test, sequences_exist) {
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constexpr bool sequencesExist = true;
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run_all_scenarios<DynamicTag, double>(sequencesExist);
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run_all_scenarios<StridedTwoRowsTag, int>(sequencesExist);
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run_all_scenarios<StridedThreeRowsTag, unsigned>(sequencesExist);
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}
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TEST(std_algorithms_find_first_of_team_test, sequences_do_not_exist) {
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constexpr bool sequencesExist = false;
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run_all_scenarios<DynamicTag, double>(sequencesExist);
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run_all_scenarios<StridedTwoRowsTag, int>(sequencesExist);
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run_all_scenarios<StridedThreeRowsTag, unsigned>(sequencesExist);
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}
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} // namespace TeamFindFirstOf
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} // namespace stdalgos
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} // namespace Test
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