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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7355 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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doc/Section_howto.txt
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@ -33,7 +33,7 @@ This section describes how to perform common tasks using LAMMPS.
6.21 "Calculating viscosity"_#howto_21 :all(b)
The example input scripts included in the LAMMPS distribution and
highlighted in "this section"_Section_example.html also show how to
highlighted in "Section_example"_Section_example.html also show how to
setup and run various kinds of simulations.
:line
@ -175,7 +175,7 @@ used in the CHARMM, AMBER, and DREIDING force fields. Setting
coefficients is done in the input data file via the
"read_data"_read_data.html command or in the input script with
commands like "pair_coeff"_pair_coeff.html or
"bond_coeff"_bond_coeff.html. See "this section"_Section_tools.html
"bond_coeff"_bond_coeff.html. See "Section_tools"_Section_tools.html
for additional tools that can use CHARMM or AMBER to assign force
field coefficients and convert their output into LAMMPS input.
@ -628,8 +628,8 @@ processors to start up another program). In the latter case the
stand-alone code could communicate with LAMMPS thru files that the
command writes and reads.
See "this section"_Section_modify.html of the documentation for how to
add a new command to LAMMPS.
See "Section_modify"_Section_modify.html of the documentation for how
to add a new command to LAMMPS.
(3) Use LAMMPS as a library called by another code. In this case the
other code is the driver and calls LAMMPS as needed. Or a wrapper
@ -663,8 +663,8 @@ example, from C++ you could create one (or more) "instances" of
LAMMPS, pass it an input script to process, or execute individual
commands, all by invoking the correct class methods in LAMMPS. From C
or Fortran you can make function calls to do the same things. See
"this section"_Section_python.html of the manual for a description of
the Python wrapper provided with LAMMPS that operates through the
"Section_python"_Section_python.html of the manual for a description
of the Python wrapper provided with LAMMPS that operates through the
LAMMPS library interface.
The files src/library.cpp and library.h contain the C-style interface