update prototypes and struct entries for liblammpsplugin. port to windows.

This commit is contained in:
Axel Kohlmeyer
2022-10-28 21:13:17 -04:00
parent e68b0b442e
commit 38335a4d47
2 changed files with 147 additions and 14 deletions

View File

@ -18,10 +18,29 @@
a LAMMPS plugin to some other software. a LAMMPS plugin to some other software.
*/ */
#include "library.h"
#include "liblammpsplugin.h" #include "liblammpsplugin.h"
#include <stdlib.h>
#if defined(_WIN32)
#ifndef WIN32_LEAN_AND_MEAN
#define WIN32_LEAN_AND_MEAN
#endif
#if defined(_WIN32_WINNT)
#undef _WIN32_WINNT
#endif
// target Windows version is windows 7 and later
#define _WIN32_WINNT _WIN32_WINNT_WIN7
#define PSAPI_VERSION 2
#include <windows.h>
#else
#include <dlfcn.h> #include <dlfcn.h>
#endif
#include <stdlib.h>
liblammpsplugin_t *liblammpsplugin_load(const char *lib) liblammpsplugin_t *liblammpsplugin_load(const char *lib)
{ {
@ -29,14 +48,26 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
void *handle; void *handle;
if (lib == NULL) return NULL; if (lib == NULL) return NULL;
#ifdef _WIN32
handle = (void *) LoadLibrary(lib);
#else
handle = dlopen(lib,RTLD_NOW|RTLD_GLOBAL); handle = dlopen(lib,RTLD_NOW|RTLD_GLOBAL);
#endif
if (handle == NULL) return NULL; if (handle == NULL) return NULL;
lmp = (liblammpsplugin_t *) malloc(sizeof(liblammpsplugin_t)); lmp = (liblammpsplugin_t *) malloc(sizeof(liblammpsplugin_t));
lmp->handle = handle; lmp->handle = handle;
#ifdef _WIN32
#define ADDSYM(symbol) lmp->symbol = (void *) GetProcAddress((HINSTANCE) handle, "lammps_" #symbol)
#else
#define ADDSYM(symbol) lmp->symbol = dlsym(handle,"lammps_" #symbol) #define ADDSYM(symbol) lmp->symbol = dlsym(handle,"lammps_" #symbol)
#endif
#if defined(LAMMPS_LIB_MPI)
ADDSYM(open); ADDSYM(open);
#endif
ADDSYM(open_no_mpi); ADDSYM(open_no_mpi);
ADDSYM(open_fortran); ADDSYM(open_fortran);
ADDSYM(close); ADDSYM(close);
@ -46,6 +77,8 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
ADDSYM(kokkos_finalize); ADDSYM(kokkos_finalize);
ADDSYM(python_finalize); ADDSYM(python_finalize);
ADDSYM(error);
ADDSYM(file); ADDSYM(file);
ADDSYM(command); ADDSYM(command);
ADDSYM(commands_list); ADDSYM(commands_list);
@ -70,6 +103,7 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
ADDSYM(extract_compute); ADDSYM(extract_compute);
ADDSYM(extract_fix); ADDSYM(extract_fix);
ADDSYM(extract_variable); ADDSYM(extract_variable);
ADDSYM(extract_variable_datatype);
ADDSYM(set_variable); ADDSYM(set_variable);
ADDSYM(gather_atoms); ADDSYM(gather_atoms);
@ -77,8 +111,15 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
ADDSYM(gather_atoms_subset); ADDSYM(gather_atoms_subset);
ADDSYM(scatter_atoms); ADDSYM(scatter_atoms);
ADDSYM(scatter_atoms_subset); ADDSYM(scatter_atoms_subset);
ADDSYM(gather_bonds); ADDSYM(gather_bonds);
ADDSYM(gather);
ADDSYM(gather_concat);
ADDSYM(gather_subset);
ADDSYM(scatter);
ADDSYM(scatter_subset);
ADDSYM(create_atoms); ADDSYM(create_atoms);
ADDSYM(find_pair_neighlist); ADDSYM(find_pair_neighlist);
@ -116,6 +157,9 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
ADDSYM(plugin_count); ADDSYM(plugin_count);
ADDSYM(plugin_name); ADDSYM(plugin_name);
ADDSYM(encode_image_flags);
ADDSYM(decode_image_flags);
ADDSYM(set_fix_external_callback); ADDSYM(set_fix_external_callback);
ADDSYM(fix_external_get_force); ADDSYM(fix_external_get_force);
ADDSYM(fix_external_set_energy_global); ADDSYM(fix_external_set_energy_global);
@ -125,6 +169,8 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
ADDSYM(fix_external_set_vector_length); ADDSYM(fix_external_set_vector_length);
ADDSYM(fix_external_set_vector); ADDSYM(fix_external_set_vector);
ADDSYM(flush_buffers);
ADDSYM(free); ADDSYM(free);
ADDSYM(is_running); ADDSYM(is_running);
@ -139,6 +185,8 @@ liblammpsplugin_t *liblammpsplugin_load(const char *lib)
lmp->has_error = NULL; lmp->has_error = NULL;
lmp->get_last_error_message = NULL; lmp->get_last_error_message = NULL;
#endif #endif
ADDSYM(python_api_version);
return lmp; return lmp;
} }
@ -147,7 +195,11 @@ int liblammpsplugin_release(liblammpsplugin_t *lmp)
if (lmp == NULL) return 1; if (lmp == NULL) return 1;
if (lmp->handle == NULL) return 2; if (lmp->handle == NULL) return 2;
#ifdef _WIN32
FreeLibrary((HINSTANCE) handle);
#else
dlclose(lmp->handle); dlclose(lmp->handle);
#endif
free((void *)lmp); free((void *)lmp);
return 0; return 0;
} }

View File

@ -28,11 +28,71 @@
#define LAMMPS_SMALLBIG #define LAMMPS_SMALLBIG
#endif #endif
#if defined(LAMMPS_LIB_MPI)
#include <mpi.h> #include <mpi.h>
#if defined(LAMMPS_BIGBIG) || defined(LAMMPS_SMALLBIG)
#include <inttypes.h> /* for int64_t */
#endif #endif
#if defined(LAMMPS_BIGBIG) || defined(LAMMPS_SMALLBIG)
#include <stdint.h> /* for int64_t */
#endif
/* The following must be kept in sync with the equivalent constants in
* python/lammps/constants.py, fortran/lammps.f90, tools/swig/lammps.i,
* and examples/COUPLE/plugin/liblammpsplugin.h */
/* Data type constants for extracting data from atoms, computes and fixes */
enum _LMP_DATATYPE_CONST {
LAMMPS_INT = 0, /*!< 32-bit integer (array) */
LAMMPS_INT_2D = 1, /*!< two-dimensional 32-bit integer array */
LAMMPS_DOUBLE = 2, /*!< 64-bit double (array) */
LAMMPS_DOUBLE_2D = 3, /*!< two-dimensional 64-bit double array */
LAMMPS_INT64 = 4, /*!< 64-bit integer (array) */
LAMMPS_INT64_2D = 5, /*!< two-dimensional 64-bit integer array */
LAMMPS_STRING = 6 /*!< C-String */
};
/* Style constants for extracting data from computes and fixes. */
enum _LMP_STYLE_CONST {
LMP_STYLE_GLOBAL = 0, /*!< return global data */
LMP_STYLE_ATOM = 1, /*!< return per-atom data */
LMP_STYLE_LOCAL = 2 /*!< return local data */
};
/* Type and size constants for extracting data from computes and fixes. */
enum _LMP_TYPE_CONST {
LMP_TYPE_SCALAR = 0, /*!< return scalar */
LMP_TYPE_VECTOR = 1, /*!< return vector */
LMP_TYPE_ARRAY = 2, /*!< return array */
LMP_SIZE_VECTOR = 3, /*!< return length of vector */
LMP_SIZE_ROWS = 4, /*!< return number of rows */
LMP_SIZE_COLS = 5 /*!< return number of columns */
};
/* Error codes to select the suitable function in the Error class */
enum _LMP_ERROR_CONST {
LMP_ERROR_WARNING = 0, /*!< call Error::warning() */
LMP_ERROR_ONE = 1, /*!< called from one MPI rank */
LMP_ERROR_ALL = 2, /*!< called from all MPI ranks */
LMP_ERROR_WORLD = 4, /*!< error on Comm::world */
LMP_ERROR_UNIVERSE = 8 /*!< error on Comm::universe */
};
/** Variable style constants for extracting data from variables.
*
* Must be kept in sync with the equivalent constants in python/lammps/constants.py,
* fortran/lammps.f90, and tools/swig/lammps.i */
enum _LMP_VAR_CONST {
LMP_VAR_EQUAL = 0, /*!< compatible with equal-style variables */
LMP_VAR_ATOM = 1, /*!< compatible with atom-style variables */
LMP_VAR_VECTOR = 2, /*!< compatible with vector-style variables */
LMP_VAR_STRING = 3 /*!< return value will be a string (catch-all) */
};
#ifdef __cplusplus #ifdef __cplusplus
extern "C" { extern "C" {
#endif #endif
@ -49,7 +109,9 @@ struct _liblammpsplugin {
int abiversion; int abiversion;
int has_exceptions; int has_exceptions;
void *handle; void *handle;
#if defined(LAMMPS_LIB_MPI)
void *(*open)(int, char **, MPI_Comm, void **); void *(*open)(int, char **, MPI_Comm, void **);
#endif
void *(*open_no_mpi)(int, char **, void **); void *(*open_no_mpi)(int, char **, void **);
void *(*open_fortran)(int, char **, void **, int); void *(*open_fortran)(int, char **, void **, int);
void (*close)(void *); void (*close)(void *);
@ -59,13 +121,15 @@ struct _liblammpsplugin {
void (*kokkos_finalize)(); void (*kokkos_finalize)();
void (*python_finalize)(); void (*python_finalize)();
void (*error)(void *, int, const char *);
void (*file)(void *, char *); void (*file)(void *, char *);
char *(*command)(void *, const char *); char *(*command)(void *, const char *);
void (*commands_list)(void *, int, const char **); void (*commands_list)(void *, int, const char **);
void (*commands_string)(void *, const char *); void (*commands_string)(void *, const char *);
double (*get_natoms)(void *); double (*get_natoms)(void *);
double (*get_thermo)(void *, char *); double (*get_thermo)(void *, const char *);
void (*extract_box)(void *, double *, double *, void (*extract_box)(void *, double *, double *,
double *, double *, double *, int *, int *); double *, double *, double *, int *, int *);
@ -78,12 +142,13 @@ struct _liblammpsplugin {
int *(*extract_global_datatype)(void *, const char *); int *(*extract_global_datatype)(void *, const char *);
void *(*extract_global)(void *, const char *); void *(*extract_global)(void *, const char *);
void *(*extract_atom_datatype)(void *, const char *); int *(*extract_atom_datatype)(void *, const char *);
void *(*extract_atom)(void *, const char *); void *(*extract_atom)(void *, const char *);
void *(*extract_compute)(void *, const char *, int, int); void *(*extract_compute)(void *, const char *, int, int);
void *(*extract_fix)(void *, const char *, int, int, int, int); void *(*extract_fix)(void *, const char *, int, int, int, int);
void *(*extract_variable)(void *, const char *, char *); void *(*extract_variable)(void *, const char *, char *);
int (*extract_variable_datatype)(void *, const char *);
int (*set_variable)(void *, char *, char *); int (*set_variable)(void *, char *, char *);
void (*gather_atoms)(void *, char *, int, int, void *); void (*gather_atoms)(void *, char *, int, int, void *);
@ -94,21 +159,25 @@ struct _liblammpsplugin {
void (*gather_bonds)(void *, void *); void (*gather_bonds)(void *, void *);
void (*gather)(void *, char *, int, int, void *);
void (*gather_concat)(void *, char *, int, int, void *);
void (*gather_subset)(void *, char *, int, int, int, int *,void *);
void (*scatter)(void *, char *, int, int, void *);
void (*scatter_subset)(void *, char *, int, int, int, int *, void *);
// lammps_create_atoms() takes tagint and imageint as args // lammps_create_atoms() takes tagint and imageint as args
// ifdef insures they are compatible with rest of LAMMPS // ifdef insures they are compatible with rest of LAMMPS
// caller must match to how LAMMPS library is built // caller must match to how LAMMPS library is built
#ifndef LAMMPS_BIGBIG #ifndef LAMMPS_BIGBIG
void (*create_atoms)(void *, int, int *, int *, double *, void (*create_atoms)(void *, int, int *, int *, double *, double *, int *, int);
double *, int *, int);
#else #else
void (*create_atoms)(void *, int, int64_t *, int *, double *, void (*create_atoms)(void *, int, int64_t *, int *, double *, double *, int64_t *, int);
double *, int64_t *, int);
#endif #endif
int (*find_pair_neighlist)(void *, const char *, int, int, int); int (*find_pair_neighlist)(void *, const char *, int, int, int);
int (*find_fix_neighlist)(void *, const char *, int); int (*find_fix_neighlist)(void *, const char *, int);
int (*find_compute_neighlist)(void *, char *, int); int (*find_compute_neighlist)(void *, const char *, int);
int (*neighlist_num_elements)(void *, int); int (*neighlist_num_elements)(void *, int);
void (*neighlist_element_neighbors)(void *, int, int, int *, int *, int **); void (*neighlist_element_neighbors)(void *, int, int, int *, int *, int **);
@ -141,8 +210,16 @@ struct _liblammpsplugin {
int (*plugin_count)(); int (*plugin_count)();
int (*plugin_name)(int, char *, char *, int); int (*plugin_name)(int, char *, char *, int);
#if !defined(LAMMPS_BIGBIG)
int (*encode_image_flags)(int, int, int);
void (*decode_image_flags)(int, int *);
#else
int64_t (*encode_image_flags)(int, int, int);
void (*decode_image_flags)(int64_t, int *);
#endif
void (*set_fix_external_callback)(void *, const char *, FixExternalFnPtr, void *); void (*set_fix_external_callback)(void *, const char *, FixExternalFnPtr, void *);
void (*fix_external_get_force)(void *, const char *); double **(*fix_external_get_force)(void *, const char *);
void (*fix_external_set_energy_global)(void *, const char *, double); void (*fix_external_set_energy_global)(void *, const char *, double);
void (*fix_external_set_energy_peratom)(void *, const char *, double *); void (*fix_external_set_energy_peratom)(void *, const char *, double *);
void (*fix_external_set_virial_global)(void *, const char *, double *); void (*fix_external_set_virial_global)(void *, const char *, double *);
@ -150,6 +227,8 @@ struct _liblammpsplugin {
void (*fix_external_set_vector_length)(void *, const char *, int); void (*fix_external_set_vector_length)(void *, const char *, int);
void (*fix_external_set_vector)(void *, const char *, int, double); void (*fix_external_set_vector)(void *, const char *, int, double);
void (*flush_buffers)(void *);
void (*free)(void *); void (*free)(void *);
void (*is_running)(void *); void (*is_running)(void *);
@ -157,6 +236,8 @@ struct _liblammpsplugin {
int (*has_error)(void *); int (*has_error)(void *);
int (*get_last_error_message)(void *, char *, int); int (*get_last_error_message)(void *, char *, int);
int (*python_api_version)();
}; };
typedef struct _liblammpsplugin liblammpsplugin_t; typedef struct _liblammpsplugin liblammpsplugin_t;