From 3b6a3f4e55c53ad6e0aa11e88c006ce56d09bcfe Mon Sep 17 00:00:00 2001 From: sjplimp Date: Thu, 10 Dec 2015 22:38:44 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14357 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/Manual.html | 6 +++--- doc/Section_accelerate.html | 6 +++--- doc/Section_commands.html | 6 +++--- doc/Section_errors.html | 6 +++--- doc/Section_example.html | 6 +++--- doc/Section_history.html | 6 +++--- doc/Section_howto.html | 6 +++--- doc/Section_intro.html | 6 +++--- doc/Section_modify.html | 6 +++--- doc/Section_packages.html | 6 +++--- doc/Section_perf.html | 6 +++--- doc/Section_python.html | 6 +++--- doc/Section_start.html | 6 +++--- doc/Section_tools.html | 6 +++--- doc/accelerate_cuda.html | 6 +++--- doc/accelerate_gpu.html | 6 +++--- doc/accelerate_intel.html | 6 +++--- doc/accelerate_kokkos.html | 6 +++--- doc/accelerate_omp.html | 6 +++--- doc/accelerate_opt.html | 6 +++--- doc/angle_charmm.html | 6 +++--- doc/angle_class2.html | 6 +++--- doc/angle_coeff.html | 6 +++--- doc/angle_cosine.html | 6 +++--- doc/angle_cosine_delta.html | 6 +++--- doc/angle_cosine_periodic.html | 6 +++--- doc/angle_cosine_shift.html | 6 +++--- doc/angle_cosine_shift_exp.html | 6 +++--- doc/angle_cosine_squared.html | 6 +++--- doc/angle_dipole.html | 6 +++--- doc/angle_fourier.html | 6 +++--- doc/angle_fourier_simple.html | 6 +++--- doc/angle_harmonic.html | 6 +++--- doc/angle_hybrid.html | 6 +++--- doc/angle_none.html | 6 +++--- doc/angle_quartic.html | 6 +++--- doc/angle_sdk.html | 6 +++--- doc/angle_style.html | 6 +++--- doc/angle_table.html | 6 +++--- doc/atom_modify.html | 6 +++--- doc/atom_style.html | 6 +++--- doc/balance.html | 6 +++--- doc/body.html | 6 +++--- doc/bond_class2.html | 6 +++--- doc/bond_coeff.html | 6 +++--- doc/bond_fene.html | 6 +++--- doc/bond_fene_expand.html | 6 +++--- doc/bond_harmonic.html | 6 +++--- doc/bond_harmonic_shift.html | 6 +++--- doc/bond_harmonic_shift_cut.html | 6 +++--- doc/bond_hybrid.html | 6 +++--- doc/bond_morse.html | 6 +++--- doc/bond_none.html | 6 +++--- doc/bond_nonlinear.html | 6 +++--- doc/bond_quartic.html | 6 +++--- doc/bond_style.html | 6 +++--- doc/bond_table.html | 6 +++--- doc/boundary.html | 6 +++--- doc/box.html | 6 +++--- doc/change_box.html | 6 +++--- doc/clear.html | 6 +++--- doc/comm_modify.html | 6 +++--- doc/comm_style.html | 6 +++--- doc/compute.html | 6 +++--- doc/compute_ackland_atom.html | 6 +++--- doc/compute_angle_local.html | 6 +++--- doc/compute_angmom_chunk.html | 6 +++--- doc/compute_basal_atom.html | 6 +++--- doc/compute_body_local.html | 6 +++--- doc/compute_bond_local.html | 6 +++--- doc/compute_centro_atom.html | 6 +++--- doc/compute_chunk_atom.html | 6 +++--- doc/compute_cluster_atom.html | 6 +++--- doc/compute_cna_atom.html | 6 +++--- doc/compute_com.html | 6 +++--- doc/compute_com_chunk.html | 6 +++--- doc/compute_contact_atom.html | 6 +++--- doc/compute_coord_atom.html | 6 +++--- doc/compute_damage_atom.html | 6 +++--- doc/compute_dihedral_local.html | 6 +++--- doc/compute_dilatation_atom.html | 6 +++--- doc/compute_displace_atom.html | 6 +++--- doc/compute_erotate_asphere.html | 6 +++--- doc/compute_erotate_rigid.html | 6 +++--- doc/compute_erotate_sphere.html | 6 +++--- doc/compute_erotate_sphere_atom.html | 6 +++--- doc/compute_event_displace.html | 6 +++--- doc/compute_fep.html | 6 +++--- doc/compute_group_group.html | 6 +++--- doc/compute_gyration.html | 6 +++--- doc/compute_gyration_chunk.html | 6 +++--- doc/compute_heat_flux.html | 6 +++--- doc/compute_hexorder_atom.html | 6 +++--- doc/compute_improper_local.html | 6 +++--- doc/compute_inertia_chunk.html | 6 +++--- doc/compute_ke.html | 6 +++--- doc/compute_ke_atom.html | 6 +++--- doc/compute_ke_atom_eff.html | 6 +++--- doc/compute_ke_eff.html | 6 +++--- doc/compute_ke_rigid.html | 6 +++--- doc/compute_meso_e_atom.html | 6 +++--- doc/compute_meso_rho_atom.html | 6 +++--- doc/compute_meso_t_atom.html | 6 +++--- doc/compute_modify.html | 6 +++--- doc/compute_msd.html | 6 +++--- doc/compute_msd_chunk.html | 6 +++--- doc/compute_msd_nongauss.html | 6 +++--- doc/compute_omega_chunk.html | 6 +++--- doc/compute_orientorder_atom.html | 6 +++--- doc/compute_pair.html | 6 +++--- doc/compute_pair_local.html | 6 +++--- doc/compute_pe.html | 6 +++--- doc/compute_pe_atom.html | 6 +++--- doc/compute_plasticity_atom.html | 6 +++--- doc/compute_pressure.html | 6 +++--- doc/compute_property_atom.html | 6 +++--- doc/compute_property_chunk.html | 6 +++--- doc/compute_property_local.html | 6 +++--- doc/compute_rdf.html | 6 +++--- doc/compute_reduce.html | 6 +++--- doc/compute_saed.html | 6 +++--- doc/compute_slice.html | 6 +++--- doc/compute_smd_contact_radius.html | 6 +++--- doc/compute_smd_damage.html | 6 +++--- doc/compute_smd_hourglass_error.html | 6 +++--- doc/compute_smd_internal_energy.html | 6 +++--- doc/compute_smd_plastic_strain.html | 6 +++--- doc/compute_smd_plastic_strain_rate.html | 6 +++--- doc/compute_smd_rho.html | 6 +++--- doc/compute_smd_tlsph_defgrad.html | 6 +++--- doc/compute_smd_tlsph_dt.html | 6 +++--- doc/compute_smd_tlsph_num_neighs.html | 6 +++--- doc/compute_smd_tlsph_shape.html | 6 +++--- doc/compute_smd_tlsph_strain.html | 6 +++--- doc/compute_smd_tlsph_strain_rate.html | 6 +++--- doc/compute_smd_tlsph_stress.html | 6 +++--- doc/compute_smd_triangle_mesh_vertices.html | 6 +++--- doc/compute_smd_ulsph_num_neighs.html | 6 +++--- doc/compute_smd_ulsph_strain.html | 6 +++--- doc/compute_smd_ulsph_strain_rate.html | 6 +++--- doc/compute_smd_ulsph_stress.html | 6 +++--- doc/compute_smd_vol.html | 6 +++--- doc/compute_sna_atom.html | 6 +++--- doc/compute_stress_atom.html | 6 +++--- doc/compute_tally.html | 6 +++--- doc/compute_temp.html | 6 +++--- doc/compute_temp_asphere.html | 6 +++--- doc/compute_temp_chunk.html | 6 +++--- doc/compute_temp_com.html | 6 +++--- doc/compute_temp_cs.html | 6 +++--- doc/compute_temp_deform.html | 6 +++--- doc/compute_temp_deform_eff.html | 6 +++--- doc/compute_temp_drude.html | 6 +++--- doc/compute_temp_eff.html | 6 +++--- doc/compute_temp_partial.html | 6 +++--- doc/compute_temp_profile.html | 6 +++--- doc/compute_temp_ramp.html | 6 +++--- doc/compute_temp_region.html | 6 +++--- doc/compute_temp_region_eff.html | 6 +++--- doc/compute_temp_rotate.html | 6 +++--- doc/compute_temp_sphere.html | 6 +++--- doc/compute_ti.html | 6 +++--- doc/compute_torque_chunk.html | 6 +++--- doc/compute_vacf.html | 6 +++--- doc/compute_vcm_chunk.html | 6 +++--- doc/compute_voronoi_atom.html | 6 +++--- doc/compute_xrd.html | 6 +++--- doc/create_atoms.html | 6 +++--- doc/create_bonds.html | 6 +++--- doc/create_box.html | 6 +++--- doc/delete_atoms.html | 6 +++--- doc/delete_bonds.html | 6 +++--- doc/dielectric.html | 6 +++--- doc/dihedral_charmm.html | 6 +++--- doc/dihedral_class2.html | 6 +++--- doc/dihedral_coeff.html | 6 +++--- doc/dihedral_cosine_shift_exp.html | 6 +++--- doc/dihedral_fourier.html | 6 +++--- doc/dihedral_harmonic.html | 6 +++--- doc/dihedral_helix.html | 6 +++--- doc/dihedral_hybrid.html | 6 +++--- doc/dihedral_multi_harmonic.html | 6 +++--- doc/dihedral_nharmonic.html | 6 +++--- doc/dihedral_none.html | 6 +++--- doc/dihedral_opls.html | 6 +++--- doc/dihedral_quadratic.html | 6 +++--- doc/dihedral_style.html | 6 +++--- doc/dihedral_table.html | 6 +++--- doc/dimension.html | 6 +++--- doc/displace_atoms.html | 6 +++--- doc/dump.html | 6 +++--- doc/dump_h5md.html | 6 +++--- doc/dump_image.html | 6 +++--- doc/dump_modify.html | 6 +++--- doc/dump_molfile.html | 6 +++--- doc/echo.html | 6 +++--- doc/fix.html | 6 +++--- doc/fix_adapt.html | 6 +++--- doc/fix_adapt_fep.html | 6 +++--- doc/fix_addforce.html | 6 +++--- doc/fix_addtorque.html | 6 +++--- doc/fix_append_atoms.html | 6 +++--- doc/fix_atc.html | 6 +++--- doc/fix_atom_swap.html | 6 +++--- doc/fix_ave_atom.html | 6 +++--- doc/fix_ave_chunk.html | 6 +++--- doc/fix_ave_correlate.html | 6 +++--- doc/fix_ave_correlate_long.html | 6 +++--- doc/fix_ave_histo.html | 6 +++--- doc/fix_ave_spatial.html | 6 +++--- doc/fix_ave_spatial_sphere.html | 6 +++--- doc/fix_ave_time.html | 6 +++--- doc/fix_aveforce.html | 6 +++--- doc/fix_balance.html | 6 +++--- doc/fix_bond_break.html | 6 +++--- doc/fix_bond_create.html | 6 +++--- doc/fix_bond_swap.html | 6 +++--- doc/fix_box_relax.html | 6 +++--- doc/fix_colvars.html | 6 +++--- doc/fix_deform.html | 6 +++--- doc/fix_deposit.html | 6 +++--- doc/fix_drag.html | 6 +++--- doc/fix_drude.html | 6 +++--- doc/fix_drude_transform.html | 6 +++--- doc/fix_dt_reset.html | 6 +++--- doc/fix_efield.html | 6 +++--- doc/fix_enforce2d.html | 6 +++--- doc/fix_evaporate.html | 6 +++--- doc/fix_external.html | 6 +++--- doc/fix_freeze.html | 6 +++--- doc/fix_gcmc.html | 6 +++--- doc/fix_gld.html | 6 +++--- doc/fix_gle.html | 6 +++--- doc/fix_gravity.html | 6 +++--- doc/fix_heat.html | 6 +++--- doc/fix_imd.html | 6 +++--- doc/fix_indent.html | 6 +++--- doc/fix_ipi.html | 6 +++--- doc/fix_langevin.html | 6 +++--- doc/fix_langevin_drude.html | 6 +++--- doc/fix_langevin_eff.html | 6 +++--- doc/fix_lb_fluid.html | 6 +++--- doc/fix_lb_momentum.html | 6 +++--- doc/fix_lb_pc.html | 6 +++--- doc/fix_lb_rigid_pc_sphere.html | 6 +++--- doc/fix_lb_viscous.html | 6 +++--- doc/fix_lineforce.html | 6 +++--- doc/fix_meso.html | 6 +++--- doc/fix_meso_stationary.html | 6 +++--- doc/fix_modify.html | 6 +++--- doc/fix_momentum.html | 6 +++--- doc/fix_move.html | 6 +++--- doc/fix_msst.html | 6 +++--- doc/fix_neb.html | 6 +++--- doc/fix_nh.html | 6 +++--- doc/fix_nh_eff.html | 6 +++--- doc/fix_nph_asphere.html | 6 +++--- doc/fix_nph_sphere.html | 6 +++--- doc/fix_nphug.html | 6 +++--- doc/fix_npt_asphere.html | 6 +++--- doc/fix_npt_sphere.html | 6 +++--- doc/fix_nve.html | 6 +++--- doc/fix_nve_asphere.html | 6 +++--- doc/fix_nve_asphere_noforce.html | 6 +++--- doc/fix_nve_body.html | 6 +++--- doc/fix_nve_eff.html | 6 +++--- doc/fix_nve_limit.html | 6 +++--- doc/fix_nve_line.html | 6 +++--- doc/fix_nve_noforce.html | 6 +++--- doc/fix_nve_sphere.html | 6 +++--- doc/fix_nve_tri.html | 6 +++--- doc/fix_nvt_asphere.html | 6 +++--- doc/fix_nvt_sllod.html | 6 +++--- doc/fix_nvt_sllod_eff.html | 6 +++--- doc/fix_nvt_sphere.html | 6 +++--- doc/fix_oneway.html | 6 +++--- doc/fix_orient_fcc.html | 6 +++--- doc/fix_phonon.html | 6 +++--- doc/fix_pimd.html | 6 +++--- doc/fix_planeforce.html | 6 +++--- doc/fix_poems.html | 6 +++--- doc/fix_pour.html | 6 +++--- doc/fix_press_berendsen.html | 6 +++--- doc/fix_print.html | 6 +++--- doc/fix_property_atom.html | 6 +++--- doc/fix_qbmsst.html | 6 +++--- doc/fix_qeq.html | 6 +++--- doc/fix_qeq_comb.html | 6 +++--- doc/fix_qeq_reax.html | 6 +++--- doc/fix_qmmm.html | 6 +++--- doc/fix_qtb.html | 6 +++--- doc/fix_reax_bonds.html | 6 +++--- doc/fix_reaxc_species.html | 6 +++--- doc/fix_recenter.html | 6 +++--- doc/fix_restrain.html | 6 +++--- doc/fix_rigid.html | 6 +++--- doc/fix_saed_vtk.html | 6 +++--- doc/fix_setforce.html | 6 +++--- doc/fix_shake.html | 6 +++--- doc/fix_smd.html | 6 +++--- doc/fix_smd_adjust_dt.html | 6 +++--- doc/fix_smd_integrate_tlsph.html | 6 +++--- doc/fix_smd_integrate_ulsph.html | 6 +++--- doc/fix_smd_move_triangulated_surface.html | 6 +++--- doc/fix_smd_setvel.html | 6 +++--- doc/fix_smd_tlsph_reference_configuration.html | 6 +++--- doc/fix_smd_wall_surface.html | 6 +++--- doc/fix_spring.html | 6 +++--- doc/fix_spring_rg.html | 6 +++--- doc/fix_spring_self.html | 6 +++--- doc/fix_srd.html | 6 +++--- doc/fix_store_force.html | 6 +++--- doc/fix_store_state.html | 6 +++--- doc/fix_temp_berendsen.html | 6 +++--- doc/fix_temp_csvr.html | 6 +++--- doc/fix_temp_rescale.html | 6 +++--- doc/fix_temp_rescale_eff.html | 6 +++--- doc/fix_tfmc.html | 6 +++--- doc/fix_thermal_conductivity.html | 6 +++--- doc/fix_ti_rs.html | 6 +++--- doc/fix_ti_spring.html | 6 +++--- doc/fix_tmd.html | 6 +++--- doc/fix_ttm.html | 6 +++--- doc/fix_tune_kspace.html | 6 +++--- doc/fix_vector.html | 6 +++--- doc/fix_viscosity.html | 6 +++--- doc/fix_viscous.html | 6 +++--- doc/fix_wall.html | 6 +++--- doc/fix_wall_gran.html | 6 +++--- doc/fix_wall_piston.html | 6 +++--- doc/fix_wall_reflect.html | 6 +++--- doc/fix_wall_region.html | 6 +++--- doc/fix_wall_srd.html | 6 +++--- doc/genindex.html | 6 +++--- doc/group.html | 6 +++--- doc/group2ndx.html | 6 +++--- doc/if.html | 6 +++--- doc/improper_class2.html | 6 +++--- doc/improper_coeff.html | 6 +++--- doc/improper_cossq.html | 6 +++--- doc/improper_cvff.html | 6 +++--- doc/improper_distance.html | 6 +++--- doc/improper_fourier.html | 6 +++--- doc/improper_harmonic.html | 6 +++--- doc/improper_hybrid.html | 6 +++--- doc/improper_none.html | 6 +++--- doc/improper_ring.html | 6 +++--- doc/improper_style.html | 6 +++--- doc/improper_umbrella.html | 6 +++--- doc/include.html | 6 +++--- doc/info.html | 6 +++--- doc/jump.html | 6 +++--- doc/kspace_modify.html | 6 +++--- doc/kspace_style.html | 6 +++--- doc/label.html | 6 +++--- doc/lattice.html | 6 +++--- doc/log.html | 6 +++--- doc/mass.html | 6 +++--- doc/min_modify.html | 6 +++--- doc/min_style.html | 6 +++--- doc/minimize.html | 6 +++--- doc/molecule.html | 6 +++--- doc/neb.html | 6 +++--- doc/neigh_modify.html | 6 +++--- doc/neighbor.html | 6 +++--- doc/newton.html | 6 +++--- doc/next.html | 6 +++--- doc/package.html | 6 +++--- doc/pair_adp.html | 6 +++--- doc/pair_airebo.html | 6 +++--- doc/pair_awpmd.html | 6 +++--- doc/pair_beck.html | 6 +++--- doc/pair_body.html | 6 +++--- doc/pair_bop.html | 6 +++--- doc/pair_born.html | 6 +++--- doc/pair_brownian.html | 6 +++--- doc/pair_buck.html | 6 +++--- doc/pair_buck_long.html | 6 +++--- doc/pair_charmm.html | 6 +++--- doc/pair_class2.html | 6 +++--- doc/pair_coeff.html | 6 +++--- doc/pair_colloid.html | 6 +++--- doc/pair_comb.html | 6 +++--- doc/pair_coul.html | 6 +++--- doc/pair_coul_diel.html | 6 +++--- doc/pair_cs.html | 6 +++--- doc/pair_dipole.html | 6 +++--- doc/pair_dpd.html | 6 +++--- doc/pair_dsmc.html | 6 +++--- doc/pair_eam.html | 6 +++--- doc/pair_edip.html | 6 +++--- doc/pair_eff.html | 6 +++--- doc/pair_eim.html | 6 +++--- doc/pair_gauss.html | 6 +++--- doc/pair_gayberne.html | 6 +++--- doc/pair_gran.html | 6 +++--- doc/pair_gromacs.html | 6 +++--- doc/pair_hbond_dreiding.html | 6 +++--- doc/pair_hybrid.html | 6 +++--- doc/pair_kim.html | 6 +++--- doc/pair_lcbop.html | 6 +++--- doc/pair_line_lj.html | 6 +++--- doc/pair_list.html | 6 +++--- doc/pair_lj.html | 6 +++--- doc/pair_lj96.html | 6 +++--- doc/pair_lj_cubic.html | 6 +++--- doc/pair_lj_expand.html | 6 +++--- doc/pair_lj_long.html | 6 +++--- doc/pair_lj_sf.html | 6 +++--- doc/pair_lj_smooth.html | 6 +++--- doc/pair_lj_smooth_linear.html | 6 +++--- doc/pair_lj_soft.html | 6 +++--- doc/pair_lubricate.html | 6 +++--- doc/pair_lubricateU.html | 6 +++--- doc/pair_mdf.html | 6 +++--- doc/pair_meam.html | 6 +++--- doc/pair_meam_spline.html | 6 +++--- doc/pair_meam_sw_spline.html | 6 +++--- doc/pair_mgpt.html | 6 +++--- doc/pair_mie.html | 6 +++--- doc/pair_modify.html | 6 +++--- doc/pair_morse.html | 6 +++--- doc/pair_nb3b_harmonic.html | 6 +++--- doc/pair_nm.html | 6 +++--- doc/pair_none.html | 6 +++--- doc/pair_peri.html | 6 +++--- doc/pair_polymorphic.html | 6 +++--- doc/pair_quip.html | 6 +++--- doc/pair_reax.html | 6 +++--- doc/pair_reax_c.html | 6 +++--- doc/pair_resquared.html | 6 +++--- doc/pair_sdk.html | 6 +++--- doc/pair_smd_hertz.html | 6 +++--- doc/pair_smd_tlsph.html | 6 +++--- doc/pair_smd_triangulated_surface.html | 6 +++--- doc/pair_smd_ulsph.html | 6 +++--- doc/pair_smtbq.html | 6 +++--- doc/pair_snap.html | 6 +++--- doc/pair_soft.html | 6 +++--- doc/pair_sph_heatconduction.html | 6 +++--- doc/pair_sph_idealgas.html | 6 +++--- doc/pair_sph_lj.html | 6 +++--- doc/pair_sph_rhosum.html | 6 +++--- doc/pair_sph_taitwater.html | 6 +++--- doc/pair_sph_taitwater_morris.html | 6 +++--- doc/pair_srp.html | 6 +++--- doc/pair_style.html | 6 +++--- doc/pair_sw.html | 6 +++--- doc/pair_table.html | 6 +++--- doc/pair_tersoff.html | 6 +++--- doc/pair_tersoff_mod.html | 6 +++--- doc/pair_tersoff_zbl.html | 6 +++--- doc/pair_thole.html | 6 +++--- doc/pair_tri_lj.html | 6 +++--- doc/pair_vashishta.html | 6 +++--- doc/pair_write.html | 6 +++--- doc/pair_yukawa.html | 6 +++--- doc/pair_yukawa_colloid.html | 6 +++--- doc/pair_zbl.html | 6 +++--- doc/partition.html | 6 +++--- doc/prd.html | 6 +++--- doc/print.html | 6 +++--- doc/processors.html | 6 +++--- doc/python.html | 6 +++--- doc/quit.html | 6 +++--- doc/read_data.html | 6 +++--- doc/read_dump.html | 6 +++--- doc/read_restart.html | 6 +++--- doc/region.html | 6 +++--- doc/replicate.html | 6 +++--- doc/rerun.html | 6 +++--- doc/reset_timestep.html | 6 +++--- doc/restart.html | 6 +++--- doc/run.html | 6 +++--- doc/run_style.html | 6 +++--- doc/search.html | 6 +++--- doc/set.html | 6 +++--- doc/shell.html | 6 +++--- doc/special_bonds.html | 6 +++--- doc/suffix.html | 6 +++--- doc/tad.html | 6 +++--- doc/temper.html | 6 +++--- doc/thermo.html | 6 +++--- doc/thermo_modify.html | 6 +++--- doc/thermo_style.html | 6 +++--- doc/timer.html | 6 +++--- doc/timestep.html | 6 +++--- doc/tutorial_drude.html | 6 +++--- doc/uncompute.html | 6 +++--- doc/undump.html | 6 +++--- doc/unfix.html | 6 +++--- doc/units.html | 6 +++--- doc/variable.html | 6 +++--- doc/velocity.html | 6 +++--- doc/write_data.html | 6 +++--- doc/write_dump.html | 6 +++--- doc/write_restart.html | 6 +++--- 497 files changed, 1491 insertions(+), 1491 deletions(-) diff --git a/doc/Manual.html b/doc/Manual.html index d94fa9533a..8d9563c7cd 100644 --- a/doc/Manual.html +++ b/doc/Manual.html @@ -8,7 +8,7 @@ - LAMMPS Documentation — LAMMPS 10 Dec 2015 version documentation + LAMMPS Documentation — LAMMPS 9 Dec 2015 documentation @@ -32,7 +32,7 @@ - + @@ -422,7 +422,7 @@ it gives quick access to documentation for all LAMMPS commands.