From 404b5793960e1d1b0a8718b2c32df1a43892b8b5 Mon Sep 17 00:00:00 2001 From: Axel Kohlmeyer Date: Fri, 5 Jan 2024 18:17:36 -0500 Subject: [PATCH] integrate into manual and add cross-references for CHARMM styles --- doc/src/angle_charmm.rst | 4 +++- doc/src/dihedral_charmm.rst | 4 +++- doc/src/pair_charmm.rst | 7 ++++++- 3 files changed, 12 insertions(+), 3 deletions(-) diff --git a/doc/src/angle_charmm.rst b/doc/src/angle_charmm.rst index 425ed7e4f1..655b860a28 100644 --- a/doc/src/angle_charmm.rst +++ b/doc/src/angle_charmm.rst @@ -70,7 +70,9 @@ for more info. Related commands """""""""""""""" -:doc:`angle_coeff ` +:doc:`angle_coeff `, :doc:`pair_style lj/charmm variants `, +:doc:`dihedral_style charmm `, +:doc:`dihedral_style charmmfsw `, :doc:`fix cmap ` Default """"""" diff --git a/doc/src/dihedral_charmm.rst b/doc/src/dihedral_charmm.rst index 79b09eea55..a5652bc74e 100644 --- a/doc/src/dihedral_charmm.rst +++ b/doc/src/dihedral_charmm.rst @@ -147,7 +147,9 @@ for more info. Related commands """""""""""""""" -:doc:`dihedral_coeff ` +:doc:`dihedral_coeff `, +:doc:`pair_style lj/charmm variants `, +:doc:`angle_style charmm `, :doc:`fix cmap ` Default """"""" diff --git a/doc/src/pair_charmm.rst b/doc/src/pair_charmm.rst index 8ff6508dea..30b03ad872 100644 --- a/doc/src/pair_charmm.rst +++ b/doc/src/pair_charmm.rst @@ -16,6 +16,7 @@ .. index:: pair_style lj/charmm/coul/msm/omp .. index:: pair_style lj/charmmfsw/coul/charmmfsh .. index:: pair_style lj/charmmfsw/coul/long +.. index:: pair_style lj/charmmfsw/coul/long/kk pair_style lj/charmm/coul/charmm command ======================================== @@ -43,6 +44,8 @@ pair_style lj/charmmfsw/coul/charmmfsh command pair_style lj/charmmfsw/coul/long command ========================================= +Accelerator Variants: *lj/charmmfsw/coul/long/kk* + Syntax """""" @@ -281,7 +284,9 @@ page for more info. Related commands """""""""""""""" -:doc:`pair_coeff ` +:doc:`pair_coeff `, :doc:`angle_style charmm `, +:doc:`dihedral_style charmm `, +:doc:`dihedral_style charmmfsw `, :doc:`fix cmap ` Default """""""