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remove trailing whitespace in manual source files

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This commit is contained in:
Axel Kohlmeyer
2018-11-26 14:48:53 -05:00
parent c42d07d907
commit 4434481c91
83 changed files with 568 additions and 568 deletions
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34
doc/src/Build_extras.txt
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@ -64,7 +64,7 @@ available on your system.
If CMake cannot find the library, you can set these variables:
-D ZLIB_INCLUDE_DIR=path # path to zlib.h header file
-D ZLIB_INCLUDE_DIR=path # path to zlib.h header file
-D ZLIB_LIBRARIES=path # path to libz.a (.so) file :pre
[Traditional make]:
@ -151,7 +151,7 @@ package uses the library settings from the lib/gpu/Makefile.machine
used to build the GPU library.
:line
KIM package :h4,link(kim)
To build with this package, the KIM library must be downloaded and
@ -178,7 +178,7 @@ package?" page.
[CMake build]:
-D DOWNLOAD_KIM=value # download OpenKIM API v1 for build, value = no (default) or yes
-D KIM_LIBRARY=path # KIM library file (only needed if a custom location)
-D KIM_LIBRARY=path # KIM library file (only needed if a custom location)
-D KIM_INCLUDE_DIR=path # KIM include directory (only needed if a custom location) :pre
If DOWNLOAD_KIM is set, the KIM library will be downloaded and built
@ -255,7 +255,7 @@ For NVIDIA GPUs using CUDA, set these 4 variables:
-D KOKKOS_ARCH="archCPU;archGPU" # archCPU = CPU from list above that is hosting the GPU
# archGPU = GPU from list above
-D KOKKOS_ENABLE_CUDA=yes
-D KOKKOS_ENABLE_OPENMP=yes
-D KOKKOS_ENABLE_OPENMP=yes
-D CMAKE_CXX_COMPILER=wrapper # wrapper = full path to Cuda nvcc wrapper :pre
The wrapper value is the Cuda nvcc compiler wrapper provided in the
@ -297,7 +297,7 @@ export OMPI_CXX = $(KOKKOS_ABSOLUTE_PATH)/config/nvcc_wrapper
CC = mpicxx :pre
:line
LATTE package :h4,link(latte)
To build with this package, you must download and build the LATTE
@ -325,7 +325,7 @@ args:
make lib-latte # print help message
make lib-latte args="-b" # download and build in lib/latte/LATTE-master
make lib-latte args="-p $HOME/latte" # use existing LATTE installation in $HOME/latte
make lib-latte args="-b -m gfortran" # download and build in lib/latte and
make lib-latte args="-b -m gfortran" # download and build in lib/latte and
# copy Makefile.lammps.gfortran to Makefile.lammps
:pre
@ -336,7 +336,7 @@ also check that the Makefile.lammps file you create is appropriate for
the compiler you use on your system to build LATTE.
:line
MEAM package :h4,link(meam)
NOTE: the use of the MEAM package is discouraged, as it has been
@ -379,7 +379,7 @@ EXTRAMAKE variable to specify a corresponding Makefile.lammps.machine
file.
:line
MESSAGE package :h4,link(message)
This package can optionally include support for messaging via sockets,
@ -408,7 +408,7 @@ existing Makefile.lammps.* and has settings to link with the ZeroMQ
library if requested in the build.
:line
MSCG package :h4,link(mscg)
To build with this package, you must download and build the MS-CG
@ -420,7 +420,7 @@ lib/mscg/README and MSCG/Install files for more details.
[CMake build]:
-D DOWNLOAD_MSCG=value # download MSCG for build, value = no (default) or yes
-D MSCG_LIBRARY=path # MSCG library file (only needed if a custom location)
-D MSCG_LIBRARY=path # MSCG library file (only needed if a custom location)
-D MSCG_INCLUDE_DIR=path # MSCG include directory (only needed if a custom location) :pre
If DOWNLOAD_MSCG is set, the MSCG library will be downloaded and built
@ -465,7 +465,7 @@ line of your Makefile.machine. See src/MAKE/OPTIONS/Makefile.opt for
an example.
:line
POEMS package :h4,link(poems)
[CMake build]:
@ -494,7 +494,7 @@ for your system, which should define an EXTRAMAKE variable to specify
a corresponding Makefile.lammps.machine file.
:line
PYTHON package :h4,link(python)
Building with the PYTHON package requires you have a Python shared
@ -521,7 +521,7 @@ Makefile.lammps.* file (and copy it to Makefile.lammps) if the LAMMPS
build fails.
:line
REAX package :h4,link(reax)
NOTE: the use of the REAX package and its "pair_style
@ -571,7 +571,7 @@ library"_voro-home.
[CMake build]:
-D DOWNLOAD_VORO=value # download Voro++ for build, value = no (default) or yes
-D VORO_LIBRARY=path # Voro++ library file (only needed if at custom location)
-D VORO_LIBRARY=path # Voro++ library file (only needed if at custom location)
-D VORO_INCLUDE_DIR=path # Voro++ include directory (only needed if at custom location) :pre
If DOWNLOAD_VORO is set, the Voro++ library will be downloaded and
@ -791,7 +791,7 @@ settings suitable for LAMMPS to compile and link PLUMED in the desired
linkage mode. After this step is completed, you can install the
USER-PLUMED package and compile LAMMPS in the usual manner:
make yes-user-plumed
make yes-user-plumed
make machine :pre
Once this compilation completes you should be able to run LAMMPS in the
@ -967,7 +967,7 @@ Quantum ESPRESSO known to work with this QM/MM interface was version
[CMake build]:
The CMake build system currently does not support building the full
QM/MM-capable hybrid executable of LAMMPS and QE called pwqmmm.x.
QM/MM-capable hybrid executable of LAMMPS and QE called pwqmmm.x.
You must use the traditional make build for this package.
[Traditional make]:
@ -1037,7 +1037,7 @@ Coulomb solver library"_scafacos-home
[CMake build]:
-D DOWNLOAD_SCAFACOS=value # download ScaFaCoS for build, value = no (default) or yes
-D SCAFACOS_LIBRARY=path # ScaFaCos library file (only needed if at custom location)
-D SCAFACOS_LIBRARY=path # ScaFaCos library file (only needed if at custom location)
-D SCAFACOS_INCLUDE_DIR=path # ScaFaCoS include directory (only needed if at custom location) :pre
If DOWNLOAD_SCAFACOS is set, the ScaFaCoS library will be downloaded