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include tools/python in whitespace check

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This commit is contained in:
Axel Kohlmeyer
2022-03-16 13:22:39 -04:00
parent bb4268518b
commit 4be3da727a
2 changed files with 10 additions and 9 deletions
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1
tools/coding_standard/whitespace.py
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@ -28,6 +28,7 @@ include:
- src/** - src/**
- lib/** - lib/**
- tools/coding_standard - tools/coding_standard
- tools/python
exclude: exclude:
- lib/colvars/Install.py - lib/colvars/Install.py
- lib/gpu/geryon/file_to_cstr.sh - lib/gpu/geryon/file_to_cstr.sh

18
tools/python/README
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@ -6,14 +6,14 @@ functionality that could be added, built on the Pizza.py modules (as
explained below), send email to Steve Plimpton (sjplimp at explained below), send email to Steve Plimpton (sjplimp at
sandia.gov). sandia.gov).
log2txt.py convert thermo info in a LAMMPS log file to columns of numbers log2txt.py convert thermo info in a LAMMPS log file to columns of numbers
logplot.py plot 2 columns of thermo info from a LAMMPS log file logplot.py plot 2 columns of thermo info from a LAMMPS log file
dumpsort.py sort the snapshots of atoms in a LAMMPS dump file by atom ID dumpsort.py sort the snapshots of atoms in a LAMMPS dump file by atom ID
dump2cfg.py convert a native LAMMPS dump file to CFG format dump2cfg.py convert a native LAMMPS dump file to CFG format
dump2xyz.py convert a native LAMMPS dump file to XYZ format dump2xyz.py convert a native LAMMPS dump file to XYZ format
dump2pdb.py convert a native LAMMPS dump file to PDB format dump2pdb.py convert a native LAMMPS dump file to PDB format
neb_combine.py combine multiple NEB dump files into one time series neb_combine.py combine multiple NEB dump files into one time series
neb_final.py combine multiple NEB final states into one sequence of states neb_final.py combine multiple NEB final states into one sequence of states
See the top of each script file for syntax, or just run it with no See the top of each script file for syntax, or just run it with no
arguments to get a syntax message. arguments to get a syntax message.
@ -68,7 +68,7 @@ directory where your data files are.
The latter requires 2 things: The latter requires 2 things:
1) that the script be made "executable", e.g. type "chmod +x log2txt.py" 1) that the script be made "executable", e.g. type "chmod +x log2txt.py"
2) that the 1st line of the script is the path of the Python installed 2) that the 1st line of the script is the path of the Python installed
on your box, e.g. /usr/local/bin/python on your box, e.g. /usr/local/bin/python
IMPORTANT NOTE: If you run the logplot.py script using the 1st method IMPORTANT NOTE: If you run the logplot.py script using the 1st method