diff --git a/doc/fix_bond_swap.html b/doc/fix_bond_swap.html index e42ac65eea..4f6ebf05dd 100644 --- a/doc/fix_bond_swap.html +++ b/doc/fix_bond_swap.html @@ -102,6 +102,13 @@ chains then inter-chain swaps will occur, but they will not conserve chain length. Neither of these scenarios is probably not what you want for this fix.
+IMPORTANT NOTE: When a bond swap occurs the image flags of monomers in +the new polymer chains can become inconsistent. See the +dump command for a discussion of image flags. This is not +an issue for running dynamics, but can affect calculation of some +diagnostic quantities or the printing of unwrapped coordinates to a +dump file. +
This fix computes a temperature each time it is invoked for use by the diff --git a/doc/fix_bond_swap.txt b/doc/fix_bond_swap.txt index 978ce1a5b0..cb41bb7a9e 100755 --- a/doc/fix_bond_swap.txt +++ b/doc/fix_bond_swap.txt @@ -99,6 +99,13 @@ chains then inter-chain swaps will occur, but they will not conserve chain length. Neither of these scenarios is probably not what you want for this fix. +IMPORTANT NOTE: When a bond swap occurs the image flags of monomers in +the new polymer chains can become inconsistent. See the +"dump"_dump.html command for a discussion of image flags. This is not +an issue for running dynamics, but can affect calculation of some +diagnostic quantities or the printing of unwrapped coordinates to a +dump file. + :line This fix computes a temperature each time it is invoked for use by the