git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@1940 f3b2605a-c512-4ea7-a41b-209d697bcdaa

src/ASPHERE/pair_gayberne.cpp

@@ -698,8 +698,6 @@ double PairGayBerne::gayberne_lj(const int i,const int j,double a1[3][3],
   double temp1,temp2,temp3;
 
   int *type = atom->type;
-  int newton_pair = force->newton_pair;
-  int nlocal = atom->nlocal;
 
   double r12hat[3];
   MathExtra::normalize3(r12,r12hat);

src/KSPACE/pair_lj_cut_coul_long.cpp

@@ -666,8 +666,6 @@ void PairLJCutCoulLong::coeff(int narg, char **arg)
 
 void PairLJCutCoulLong::init_style()
 {
-  int i,j;
-
   if (!atom->q_flag)
     error->all("Pair style lj/cut/coul/long requires atom attribute q");
 

src/KSPACE/pair_lj_cut_coul_long_tip4p.cpp

@@ -389,8 +389,6 @@ void PairLJCutCoulLongTIP4P::settings(int narg, char **arg)
 
 void PairLJCutCoulLongTIP4P::init_style()
 {
-  int i,j;
-
   if (atom->tag_enable == 0)
     error->all("Pair style lj/cut/coul/long/tip4p requires atom IDs");
   if (!force->newton_pair) 

src/Makefile

@@ -14,7 +14,7 @@ OBJ = 	$(SRC:.cpp=.o)
 # Package variables
 
 PACKAGE = asphere class2 colloid dipole dpd granular \
-	  kspace manybody meam molecule opt poems xtc
+	  kspace manybody meam molecule opt poems xtc sd
 
 PACKUSER = user-ackland user-cg-cmm user-ewaldn user-smd
 

src/compute_temp_sphere.cpp

@@ -217,12 +217,12 @@ void ComputeTempSphere::compute_vector()
 	t[5] += massone * v[i][1]*v[i][2];
 
 	inertiaone = inertia[type[i]];
-	t[0] += massone * omega[i][0]*omega[i][0];
-	t[1] += massone * omega[i][1]*omega[i][1];
-	t[2] += massone * omega[i][2]*omega[i][2];
-	t[3] += massone * omega[i][0]*omega[i][1];
-	t[4] += massone * omega[i][0]*omega[i][2];
-	t[5] += massone * omega[i][1]*omega[i][2];
+	t[0] += inertiaone * omega[i][0]*omega[i][0];
+	t[1] += inertiaone * omega[i][1]*omega[i][1];
+	t[2] += inertiaone * omega[i][2]*omega[i][2];
+	t[3] += inertiaone * omega[i][0]*omega[i][1];
+	t[4] += inertiaone * omega[i][0]*omega[i][2];
+	t[5] += inertiaone * omega[i][1]*omega[i][2];
       }
   } else {
     for (i = 0; i < nlocal; i++)
@@ -236,12 +236,12 @@ void ComputeTempSphere::compute_vector()
 	t[5] += massone * v[i][1]*v[i][2];
 
 	inertiaone = INERTIA*radius[i]*radius[i]*rmass[i];
-	t[0] += massone * omega[i][0]*omega[i][0];
-	t[1] += massone * omega[i][1]*omega[i][1];
-	t[2] += massone * omega[i][2]*omega[i][2];
-	t[3] += massone * omega[i][0]*omega[i][1];
-	t[4] += massone * omega[i][0]*omega[i][2];
-	t[5] += massone * omega[i][1]*omega[i][2];
+	t[0] += inertiaone * omega[i][0]*omega[i][0];
+	t[1] += inertiaone * omega[i][1]*omega[i][1];
+	t[2] += inertiaone * omega[i][2]*omega[i][2];
+	t[3] += inertiaone * omega[i][0]*omega[i][1];
+	t[4] += inertiaone * omega[i][0]*omega[i][2];
+	t[5] += inertiaone * omega[i][1]*omega[i][2];
       }
   }
 

src/delete_atoms.cpp

@@ -238,7 +238,7 @@ void DeleteAtoms::delete_overlap(int narg, char **arg)
   double *special_coul = force->special_coul;
   double *special_lj = force->special_lj;
 
-  int i,j,ii,jj,inum,jnum,itype;
+  int i,j,ii,jj,inum,jnum;
   double xtmp,ytmp,ztmp,delx,dely,delz,rsq;
   int *ilist,*jlist,*numneigh,**firstneigh;
 
@@ -252,7 +252,6 @@ void DeleteAtoms::delete_overlap(int narg, char **arg)
     xtmp = x[i][0];
     ytmp = x[i][1];
     ztmp = x[i][2];
-    itype = type[i];
     jlist = firstneigh[i];
     jnum = numneigh[i];
 

src/fix_langevin.cpp

@@ -148,7 +148,6 @@ void FixLangevin::post_force(int vflag)
 {
   double gamma1,gamma2;
 
-  double **x = atom->x;
   double **v = atom->v;
   double **f = atom->f;
   int *type = atom->type;

src/fix_press_berendsen.cpp

@@ -366,7 +366,7 @@ void FixPressBerendsen::couple()
 
 void FixPressBerendsen::remap()
 {
-  int i,n;
+  int i;
   double oldlo,oldhi,ctr;
 
   double **x = atom->x;

src/fix_thermal_conductivity.cpp

@@ -127,7 +127,7 @@ void FixThermalConductivity::init()
 void FixThermalConductivity::end_of_step()
 {
   int i,j,m,insert;
-  double p,coord,ke;
+  double coord,ke;
   MPI_Status status;
   struct {
     double value;

src/pair_lj_gromacs.cpp

@@ -78,7 +78,6 @@ void PairLJGromacs::compute(int eflag, int vflag)
 
   double **x = atom->x;
   double **f = atom->f;
-  double *q = atom->q;
   int *type = atom->type;
   int nlocal = atom->nlocal;
   int nall = nlocal + atom->nghost;

src/style.h

@@ -363,6 +363,8 @@ RegionStyle(union,RegUnion)
 #include "style_poems.h"
 #include "style_xtc.h"
 
+#include "style_sd.h"
+
 // user add-ons: individual classes and packages
 
 #include "style_user.h"

src/variable.cpp

@@ -1084,7 +1084,7 @@ double Variable::evaluate(char *str, Tree **tree)
    customize by adding a math function:
      sqrt(),exp(),ln(),log(),sin(),cos(),tan(),asin(),acos(),atan()
      ceil(),floor(),round()
-/* ---------------------------------------------------------------------- */
+---------------------------------------------------------------------- */
 
 double Variable::eval_tree(Tree *tree, int i)
 {