git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7579 f3b2605a-c512-4ea7-a41b-209d697bcdaa

doc/Eqs/angle_cosine_delta.tex

@@ -3,7 +3,7 @@
 \begin{document}
 
 $$
-  E = K [\cos(\theta) - \cos(\theta_0)]
+  E = K [1 - \cos(\theta - \theta_0)]
 $$
 
 \end{document}

doc/Section_accelerate.html

@@ -574,6 +574,19 @@ calculations.  The USER-CUDA package currently supports a wider range
 of pair styles and can also accelerate many fix styles and some
 compute styles, as well as neighbor list and PPPM calculations. 
 
+<LI>The USER-CUDA package does not support acceleration for minimization. 
+
+<LI>The USER-CUDA package does not support hybrid pair styles. 
+
+<LI>The USER-CUDA package can order atoms in the neighbor list differently
+from run to run resulting in a different order for force accumulation. 
+
+<LI>The USER-CUDA package has a limit on the number of atom types that can be
+used in a simulation. 
+
+<LI>The GPU package requires neighbor lists to be built on the CPU when using
+exclusion lists or a triclinic simulation box. 
+
 <LI>The GPU package uses more GPU memory than the USER-CUDA package.  This
 is generally not a problem since typical runs are computation-limited
 rather than memory-limited. 

doc/Section_commands.html

@@ -453,35 +453,37 @@ package</A>.
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doc/Section_errors.html

@@ -1343,10 +1343,26 @@ in LAMMPS.
 the simulation box is very small in some dimension, compared to the
 neighbor cutoff.  Use the "nsq" style instead of "bin" style. 
 
+<DT><I>Cannot use newton pair with buck/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
+<DT><I>Cannot use newton pair with buck/coul/cut/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
+<DT><I>Cannot use newton pair with buck/coul/long/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
 <DT><I>Cannot use newton pair with coul/long/gpu pair style</I> 
 
 <DD>UNDOCUMENTED 
 
+<DT><I>Cannot use newton pair with eam/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
 <DT><I>Cannot use newton pair with gayberne/gpu pair style</I> 
 
 <DD>UNDOCUMENTED 
@@ -1391,6 +1407,14 @@ neighbor cutoff.  Use the "nsq" style instead of "bin" style.
 
 <DD>UNDOCUMENTED 
 
+<DT><I>Cannot use newton pair with table/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
+<DT><I>Cannot use newton pair with yukawa/gpu pair style</I> 
+
+<DD>UNDOCUMENTED 
+
 <DT><I>Cannot use non-zero forces in an energy minimization</I> 
 
 <DD>Fix setforce cannot be used in this manner.  Use fix addforce

doc/pair_buck.html

@@ -13,18 +13,24 @@
 </H3>
 <H3>pair_style buck/cuda command 
 </H3>
+<H3>pair_style buck/gpu command 
+</H3>
 <H3>pair_style buck/omp command 
 </H3>
 <H3>pair_style buck/coul/cut command 
 </H3>
 <H3>pair_style buck/coul/cut/cuda command 
 </H3>
+<H3>pair_style buck/coul/cut/gpu command 
+</H3>
 <H3>pair_style buck/coul/cut/omp command 
 </H3>
 <H3>pair_style buck/coul/long command 
 </H3>
 <H3>pair_style buck/coul/long/cuda command 
 </H3>
+<H3>pair_style buck/coul/long/gpu command 
+</H3>
 <H3>pair_style buck/coul/long/omp command 
 </H3>
 <P><B>Syntax:</B>

doc/pair_eam.html

@@ -13,6 +13,8 @@
 </H3>
 <H3>pair_style eam/cuda command 
 </H3>
+<H3>pair_style eam/gpu command 
+</H3>
 <H3>pair_style eam/omp command 
 </H3>
 <H3>pair_style eam/opt command 
@@ -21,6 +23,8 @@
 </H3>
 <H3>pair_style eam/alloy/cuda command 
 </H3>
+<H3>pair_style eam/alloy/gpu command 
+</H3>
 <H3>pair_style eam/alloy/omp command 
 </H3>
 <H3>pair_style eam/alloy/opt command 
@@ -33,6 +37,8 @@
 </H3>
 <H3>pair_style eam/fs/cuda command 
 </H3>
+<H3>pair_style eam/fs/gpu command 
+</H3>
 <H3>pair_style eam/fs/omp command 
 </H3>
 <H3>pair_style eam/fs/opt command 

doc/pair_table.html

@@ -11,6 +11,8 @@
 
 <H3>pair_style table command 
 </H3>
+<H3>pair_style table/gpu command 
+</H3>
 <H3>pair_style table/omp command 
 </H3>
 <P><B>Syntax:</B>

doc/pair_yukawa.html

@@ -11,6 +11,8 @@
 
 <H3>pair_style yukawa command 
 </H3>
+<H3>pair_style yukawa/gpu command 
+</H3>
 <H3>pair_style yukawa/omp command 
 </H3>
 <P><B>Syntax:</B>