Commit JT 071719

- added doc for read_data spin
- corrected an error in pack/unpack data hybrid
- added mask flags in fix_nve_spin::initial_integrate
- removed spin renormalization in min_spin (was causing a bug)
This commit is contained in:
julient31
2019-07-17 21:49:26 -06:00
parent 0a90032b4c
commit 60ebc08d0f
4 changed files with 53 additions and 40 deletions

View File

@ -565,6 +565,7 @@ molecular: atom-ID molecule-ID atom-type x y z
peri: atom-ID atom-type volume density x y z
smd: atom-ID atom-type molecule volume mass kernel-radius contact-radius x y z
sphere: atom-ID atom-type diameter density x y z
spin: atom-ID atom-type sp x y z spx spy spz
template: atom-ID molecule-ID template-index template-atom atom-type x y z
tri: atom-ID molecule-ID atom-type triangleflag density x y z
wavepacket: atom-ID atom-type charge spin eradius etag cs_re cs_im x y z
@ -595,6 +596,8 @@ mux,muy,muz = components of dipole moment of atom (dipole units)
q = charge on atom (charge units)
rho = density (need units) for SPH particles
spin = electron spin (+1/-1), 0 = nuclei, 2 = fixed-core, 3 = pseudo-cores (i.e. ECP)
sp = norm of magnetic spin of atom (in number of Bohr magnetons)
spx,spy,spz = components of magnetic spin of atom (adim normalized vector)
template-atom = which atom within a template molecule the atom is
template-index = which molecule within the molecule template the atom is part of
theta = internal temperature of a DPD particle