From 6406151a5025688a1dea11023f9fa6654d332d88 Mon Sep 17 00:00:00 2001 From: sjplimp Date: Wed, 30 Apr 2014 20:58:58 +0000 Subject: [PATCH] git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11856 f3b2605a-c512-4ea7-a41b-209d697bcdaa --- doc/delete_atoms.html | 16 +++++++++++----- doc/delete_atoms.txt | 16 +++++++++++----- 2 files changed, 22 insertions(+), 10 deletions(-) diff --git a/doc/delete_atoms.html b/doc/delete_atoms.html index 528b332f50..28db4152ec 100644 --- a/doc/delete_atoms.html +++ b/doc/delete_atoms.html @@ -91,11 +91,17 @@ has already been assigned.

It the mol keyword is set to yes, then for every atom that is deleted, all other atoms in the same molecule will also be deleted. -This keyword is only used by the region style. It is a way to -insure that entire molecules are deleted instead of only a subset of -atoms in the molecule which will typically lead to errors because of -bond, angle, or dihedral interactions stored by remaining atoms which -reference deleted atoms. +This is a way to insure that entire molecules are deleted instead of +only a subset of atoms in the molecule which will typically lead to +errors because of bond, angle, or dihedral interactions stored by +remaining atoms which reference deleted atoms. +

+

IMPORTANT NOTE: The molecule deletion operation in invoked after all +individual atoms have been deleted using the rules described above for +each style. This means additional atoms may be deleted that are not +in the group or region, that are not required by the overlap cutoff +criterion, or that will create a higher fraction of porosity than was +requested.

Restrictions:

diff --git a/doc/delete_atoms.txt b/doc/delete_atoms.txt index 2d7eed9e7f..d646088683 100644 --- a/doc/delete_atoms.txt +++ b/doc/delete_atoms.txt @@ -83,11 +83,17 @@ has already been assigned. It the {mol} keyword is set to {yes}, then for every atom that is deleted, all other atoms in the same molecule will also be deleted. -This keyword is only used by the {region} style. It is a way to -insure that entire molecules are deleted instead of only a subset of -atoms in the molecule which will typically lead to errors because of -bond, angle, or dihedral interactions stored by remaining atoms which -reference deleted atoms. +This is a way to insure that entire molecules are deleted instead of +only a subset of atoms in the molecule which will typically lead to +errors because of bond, angle, or dihedral interactions stored by +remaining atoms which reference deleted atoms. + +IMPORTANT NOTE: The molecule deletion operation in invoked after all +individual atoms have been deleted using the rules described above for +each style. This means additional atoms may be deleted that are not +in the group or region, that are not required by the overlap cutoff +criterion, or that will create a higher fraction of porosity than was +requested. [Restrictions:]