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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@1680 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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2008-03-28 15:02:43 +00:00
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doc/Section_tools.html
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@ -52,6 +52,7 @@ own sub-directories with their own Makefiles.
<LI><A HREF = "#arc">lmp2arc</A>
<LI><A HREF = "#cfg">lmp2cfg</A>
<LI><A HREF = "#traj">lmp2traj</A>
<LI><A HREF = "#vmd">lmp2vmd</A>
<LI><A HREF = "#matlab">matlab</A>
<LI><A HREF = "#micelle">micelle2d</A>
<LI><A HREF = "#msi">msi2lmp</A>
@ -189,6 +190,21 @@ README file for more information.
</P>
<HR>
<H4><A NAME = "vmd"></A>lmp2vmd tool
</H4>
<P>The lmp2vmd sub-directory contains some scripts for converting LAMMPS
files into formats suitable for visualizing with the <A HREF = "http://www.ks.uiuc.edu/Research/vmd/">VMD
package</A>.
</P>
<P>One script extracts bond topology info from a LAMMPS data file. A
second script attached amino acid (residue) information to what is
extracted from a data file. See the README file for more information.
</P>
<P>These scripts werer written by Axel Kohlmeyer (akohlmey at
cmm.chem.upenn.edu) at U Penn.
</P>
<HR>
<H4><A NAME = "matlab"></A>matlab tool
</H4>
<P>The matlab sub-directory contains several <A HREF = "http://www.mathworks.com">MATLAB</A> scripts for