git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15073 f3b2605a-c512-4ea7-a41b-209d697bcdaa

doc/html/Section_commands.html

@@ -618,13 +618,13 @@ This is indicated by additional letters in parenthesis: c = USER-CUDA,
 g = GPU, i = USER-INTEL, k = KOKKOS, o = USER-OMP, t = OPT.</p>
 <table border="1" class="docutils">
 <colgroup>
-<col width="12%" />
 <col width="15%" />
 <col width="13%" />
 <col width="11%" />
 <col width="12%" />
 <col width="11%" />
 <col width="16%" />
+<col width="11%" />
 <col width="12%" />
 </colgroup>
 <tbody valign="top">
@@ -639,129 +639,129 @@ g = GPU, i = USER-INTEL, k = KOKKOS, o = USER-OMP, t = OPT.</p>
 </tr>
 <tr class="row-even"><td><a class="reference internal" href="fix_ave_histo.html"><span class="doc">ave/histo</span></a></td>
 <td><a class="reference internal" href="fix_ave_histo.html"><span class="doc">ave/histo/weight</span></a></td>
-<td><a class="reference internal" href="fix_ave_spatial.html"><span class="doc">ave/spatial</span></a></td>
 <td><a class="reference internal" href="fix_ave_time.html"><span class="doc">ave/time</span></a></td>
 <td><a class="reference internal" href="fix_balance.html"><span class="doc">balance</span></a></td>
 <td><a class="reference internal" href="fix_bond_break.html"><span class="doc">bond/break</span></a></td>
 <td><a class="reference internal" href="fix_bond_create.html"><span class="doc">bond/create</span></a></td>
 <td><a class="reference internal" href="fix_bond_swap.html"><span class="doc">bond/swap</span></a></td>
+<td><a class="reference internal" href="fix_box_relax.html"><span class="doc">box/relax</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_box_relax.html"><span class="doc">box/relax</span></a></td>
-<td><a class="reference internal" href="fix_deform.html"><span class="doc">deform (k)</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_deform.html"><span class="doc">deform (k)</span></a></td>
 <td><a class="reference internal" href="fix_deposit.html"><span class="doc">deposit</span></a></td>
 <td><a class="reference internal" href="fix_drag.html"><span class="doc">drag</span></a></td>
 <td><a class="reference internal" href="fix_dt_reset.html"><span class="doc">dt/reset</span></a></td>
 <td><a class="reference internal" href="fix_efield.html"><span class="doc">efield</span></a></td>
 <td><a class="reference internal" href="fix_ehex.html"><span class="doc">ehex</span></a></td>
 <td><a class="reference internal" href="fix_enforce2d.html"><span class="doc">enforce2d (c)</span></a></td>
+<td><a class="reference internal" href="fix_evaporate.html"><span class="doc">evaporate</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_evaporate.html"><span class="doc">evaporate</span></a></td>
-<td><a class="reference internal" href="fix_external.html"><span class="doc">external</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_external.html"><span class="doc">external</span></a></td>
 <td><a class="reference internal" href="fix_freeze.html"><span class="doc">freeze (c)</span></a></td>
 <td><a class="reference internal" href="fix_gcmc.html"><span class="doc">gcmc</span></a></td>
 <td><a class="reference internal" href="fix_gld.html"><span class="doc">gld</span></a></td>
 <td><a class="reference internal" href="fix_gravity.html"><span class="doc">gravity (co)</span></a></td>
 <td><a class="reference internal" href="fix_heat.html"><span class="doc">heat</span></a></td>
 <td><a class="reference internal" href="fix_indent.html"><span class="doc">indent</span></a></td>
+<td><a class="reference internal" href="fix_langevin.html"><span class="doc">langevin (k)</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_langevin.html"><span class="doc">langevin (k)</span></a></td>
-<td><a class="reference internal" href="fix_lineforce.html"><span class="doc">lineforce</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_lineforce.html"><span class="doc">lineforce</span></a></td>
 <td><a class="reference internal" href="fix_momentum.html"><span class="doc">momentum</span></a></td>
 <td><a class="reference internal" href="fix_move.html"><span class="doc">move</span></a></td>
 <td><a class="reference internal" href="fix_msst.html"><span class="doc">msst</span></a></td>
 <td><a class="reference internal" href="fix_neb.html"><span class="doc">neb</span></a></td>
 <td><a class="reference internal" href="fix_nh.html"><span class="doc">nph (ko)</span></a></td>
 <td><a class="reference internal" href="fix_nphug.html"><span class="doc">nphug (o)</span></a></td>
+<td><a class="reference internal" href="fix_nph_asphere.html"><span class="doc">nph/asphere (o)</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_nph_asphere.html"><span class="doc">nph/asphere (o)</span></a></td>
-<td><a class="reference internal" href="fix_nph_body.html"><span class="doc">nph/body</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_nph_body.html"><span class="doc">nph/body</span></a></td>
 <td><a class="reference internal" href="fix_nph_sphere.html"><span class="doc">nph/sphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_nh.html"><span class="doc">npt (ckio)</span></a></td>
 <td><a class="reference internal" href="fix_npt_asphere.html"><span class="doc">npt/asphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_npt_body.html"><span class="doc">npt/body</span></a></td>
 <td><a class="reference internal" href="fix_npt_sphere.html"><span class="doc">npt/sphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_nve.html"><span class="doc">nve (ckio)</span></a></td>
+<td><a class="reference internal" href="fix_nve_asphere.html"><span class="doc">nve/asphere (i)</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_nve_asphere.html"><span class="doc">nve/asphere (i)</span></a></td>
-<td><a class="reference internal" href="fix_nve_asphere_noforce.html"><span class="doc">nve/asphere/noforce</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_nve_asphere_noforce.html"><span class="doc">nve/asphere/noforce</span></a></td>
 <td><a class="reference internal" href="fix_nve_body.html"><span class="doc">nve/body</span></a></td>
 <td><a class="reference internal" href="fix_nve_limit.html"><span class="doc">nve/limit</span></a></td>
 <td><a class="reference internal" href="fix_nve_line.html"><span class="doc">nve/line</span></a></td>
 <td><a class="reference internal" href="fix_nve_noforce.html"><span class="doc">nve/noforce</span></a></td>
 <td><a class="reference internal" href="fix_nve_sphere.html"><span class="doc">nve/sphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_nve_tri.html"><span class="doc">nve/tri</span></a></td>
+<td><a class="reference internal" href="fix_nh.html"><span class="doc">nvt (ciko)</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_nh.html"><span class="doc">nvt (ciko)</span></a></td>
-<td><a class="reference internal" href="fix_nvt_asphere.html"><span class="doc">nvt/asphere (o)</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_nvt_asphere.html"><span class="doc">nvt/asphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_nvt_body.html"><span class="doc">nvt/body</span></a></td>
 <td><a class="reference internal" href="fix_nvt_sllod.html"><span class="doc">nvt/sllod (io)</span></a></td>
 <td><a class="reference internal" href="fix_nvt_sphere.html"><span class="doc">nvt/sphere (o)</span></a></td>
 <td><a class="reference internal" href="fix_oneway.html"><span class="doc">oneway</span></a></td>
 <td><a class="reference internal" href="fix_orient_fcc.html"><span class="doc">orient/fcc</span></a></td>
 <td><a class="reference internal" href="fix_planeforce.html"><span class="doc">planeforce</span></a></td>
+<td><a class="reference internal" href="fix_poems.html"><span class="doc">poems</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_poems.html"><span class="doc">poems</span></a></td>
-<td><a class="reference internal" href="fix_pour.html"><span class="doc">pour</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_pour.html"><span class="doc">pour</span></a></td>
 <td><a class="reference internal" href="fix_press_berendsen.html"><span class="doc">press/berendsen</span></a></td>
 <td><a class="reference internal" href="fix_print.html"><span class="doc">print</span></a></td>
 <td><a class="reference internal" href="fix_property_atom.html"><span class="doc">property/atom</span></a></td>
 <td><a class="reference internal" href="fix_qeq_comb.html"><span class="doc">qeq/comb (o)</span></a></td>
 <td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/dynamic</span></a></td>
 <td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/fire</span></a></td>
+<td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/point</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/point</span></a></td>
-<td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/shielded</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/shielded</span></a></td>
 <td><a class="reference internal" href="fix_qeq.html"><span class="doc">qeq/slater</span></a></td>
 <td><a class="reference internal" href="fix_shake.html"><span class="doc">rattle</span></a></td>
 <td><a class="reference internal" href="fix_reax_bonds.html"><span class="doc">reax/bonds</span></a></td>
 <td><a class="reference internal" href="fix_recenter.html"><span class="doc">recenter</span></a></td>
 <td><a class="reference internal" href="fix_restrain.html"><span class="doc">restrain</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid (o)</span></a></td>
+<td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/nph (o)</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/nph (o)</span></a></td>
-<td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/npt (o)</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/npt (o)</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/nve (o)</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/nvt (o)</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small (o)</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small/nph</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small/npt</span></a></td>
 <td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small/nve</span></a></td>
+<td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small/nvt</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_rigid.html"><span class="doc">rigid/small/nvt</span></a></td>
-<td><a class="reference internal" href="fix_setforce.html"><span class="doc">setforce (ck)</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_setforce.html"><span class="doc">setforce (ck)</span></a></td>
 <td><a class="reference internal" href="fix_shake.html"><span class="doc">shake (c)</span></a></td>
 <td><a class="reference internal" href="fix_spring.html"><span class="doc">spring</span></a></td>
 <td><a class="reference internal" href="fix_spring_rg.html"><span class="doc">spring/rg</span></a></td>
 <td><a class="reference internal" href="fix_spring_self.html"><span class="doc">spring/self</span></a></td>
 <td><a class="reference internal" href="fix_srd.html"><span class="doc">srd</span></a></td>
 <td><a class="reference internal" href="fix_store_force.html"><span class="doc">store/force</span></a></td>
+<td><a class="reference internal" href="fix_store_state.html"><span class="doc">store/state</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_store_state.html"><span class="doc">store/state</span></a></td>
-<td><a class="reference internal" href="fix_temp_berendsen.html"><span class="doc">temp/berendsen (c)</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_temp_berendsen.html"><span class="doc">temp/berendsen (c)</span></a></td>
 <td><a class="reference internal" href="fix_temp_csvr.html"><span class="doc">temp/csld</span></a></td>
 <td><a class="reference internal" href="fix_temp_csvr.html"><span class="doc">temp/csvr</span></a></td>
 <td><a class="reference internal" href="fix_temp_rescale.html"><span class="doc">temp/rescale (c)</span></a></td>
 <td><a class="reference internal" href="fix_tfmc.html"><span class="doc">tfmc</span></a></td>
 <td><a class="reference internal" href="fix_thermal_conductivity.html"><span class="doc">thermal/conductivity</span></a></td>
 <td><a class="reference internal" href="fix_tmd.html"><span class="doc">tmd</span></a></td>
+<td><a class="reference internal" href="fix_ttm.html"><span class="doc">ttm</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_ttm.html"><span class="doc">ttm</span></a></td>
-<td><a class="reference internal" href="fix_tune_kspace.html"><span class="doc">tune/kspace</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_tune_kspace.html"><span class="doc">tune/kspace</span></a></td>
 <td><a class="reference internal" href="fix_vector.html"><span class="doc">vector</span></a></td>
 <td><a class="reference internal" href="fix_viscosity.html"><span class="doc">viscosity</span></a></td>
 <td><a class="reference internal" href="fix_viscous.html"><span class="doc">viscous (c)</span></a></td>
 <td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/colloid</span></a></td>
 <td><a class="reference internal" href="fix_wall_gran.html"><span class="doc">wall/gran</span></a></td>
 <td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/harmonic</span></a></td>
+<td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/lj1043</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/lj1043</span></a></td>
-<td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/lj126</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/lj126</span></a></td>
 <td><a class="reference internal" href="fix_wall.html"><span class="doc">wall/lj93</span></a></td>
 <td><a class="reference internal" href="fix_wall_piston.html"><span class="doc">wall/piston</span></a></td>
 <td><a class="reference internal" href="fix_wall_reflect.html"><span class="doc">wall/reflect (k)</span></a></td>
 <td><a class="reference internal" href="fix_wall_region.html"><span class="doc">wall/region</span></a></td>
 <td><a class="reference internal" href="fix_wall_srd.html"><span class="doc">wall/srd</span></a></td>
 <td>&nbsp;</td>
+<td>&nbsp;</td>
 </tr>
 </tbody>
 </table>
@@ -771,74 +771,74 @@ g = GPU, i = USER-INTEL, k = KOKKOS, o = USER-OMP, t = OPT.</p>
 <colgroup>
 <col width="15%" />
 <col width="15%" />
-<col width="15%" />
 <col width="20%" />
 <col width="14%" />
 <col width="22%" />
+<col width="15%" />
 </colgroup>
 <tbody valign="top">
 <tr class="row-odd"><td><a class="reference internal" href="fix_adapt_fep.html"><span class="doc">adapt/fep</span></a></td>
 <td><a class="reference internal" href="fix_addtorque.html"><span class="doc">addtorque</span></a></td>
 <td><a class="reference internal" href="fix_atc.html"><span class="doc">atc</span></a></td>
 <td><a class="reference internal" href="fix_ave_correlate_long.html"><span class="doc">ave/correlate/long</span></a></td>
-<td><a class="reference internal" href="fix_ave_spatial_sphere.html"><span class="doc">ave/spatial/sphere</span></a></td>
 <td><a class="reference internal" href="fix_colvars.html"><span class="doc">colvars</span></a></td>
+<td><a class="reference internal" href="fix_drude.html"><span class="doc">drude</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_drude.html"><span class="doc">drude</span></a></td>
-<td><a class="reference internal" href="fix_drude_transform.html"><span class="doc">drude/transform/direct</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_drude_transform.html"><span class="doc">drude/transform/direct</span></a></td>
 <td><a class="reference internal" href="fix_drude_transform.html"><span class="doc">drude/transform/reverse</span></a></td>
 <td><a class="reference internal" href="fix_eos_cv.html"><span class="doc">eos/cv</span></a></td>
 <td><a class="reference internal" href="fix_eos_table.html"><span class="doc">eos/table</span></a></td>
 <td><a class="reference internal" href="fix_gle.html"><span class="doc">gle</span></a></td>
+<td><a class="reference internal" href="fix_imd.html"><span class="doc">imd</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_imd.html"><span class="doc">imd</span></a></td>
-<td><a class="reference internal" href="fix_ipi.html"><span class="doc">ipi</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_ipi.html"><span class="doc">ipi</span></a></td>
 <td><a class="reference internal" href="fix_langevin_drude.html"><span class="doc">langevin/drude</span></a></td>
 <td><a class="reference internal" href="fix_langevin_eff.html"><span class="doc">langevin/eff</span></a></td>
 <td><a class="reference internal" href="fix_lb_fluid.html"><span class="doc">lb/fluid</span></a></td>
 <td><a class="reference internal" href="fix_lb_momentum.html"><span class="doc">lb/momentum</span></a></td>
+<td><a class="reference internal" href="fix_lb_pc.html"><span class="doc">lb/pc</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_lb_pc.html"><span class="doc">lb/pc</span></a></td>
-<td><a class="reference internal" href="fix_lb_rigid_pc_sphere.html"><span class="doc">lb/rigid/pc/sphere</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_lb_rigid_pc_sphere.html"><span class="doc">lb/rigid/pc/sphere</span></a></td>
 <td><a class="reference internal" href="fix_lb_viscous.html"><span class="doc">lb/viscous</span></a></td>
 <td><a class="reference internal" href="fix_meso.html"><span class="doc">meso</span></a></td>
 <td><a class="reference internal" href="fix_manifoldforce.html"><span class="doc">manifoldforce</span></a></td>
 <td><a class="reference internal" href="fix_meso_stationary.html"><span class="doc">meso/stationary</span></a></td>
+<td><a class="reference internal" href="fix_nve_manifold_rattle.html"><span class="doc">nve/manifold/rattle</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_nve_manifold_rattle.html"><span class="doc">nve/manifold/rattle</span></a></td>
-<td><a class="reference internal" href="fix_nvt_manifold_rattle.html"><span class="doc">nvt/manifold/rattle</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_nvt_manifold_rattle.html"><span class="doc">nvt/manifold/rattle</span></a></td>
 <td><a class="reference internal" href="fix_nh_eff.html"><span class="doc">nph/eff</span></a></td>
 <td><a class="reference internal" href="fix_nh_eff.html"><span class="doc">npt/eff</span></a></td>
 <td><a class="reference internal" href="fix_nve_eff.html"><span class="doc">nve/eff</span></a></td>
 <td><a class="reference internal" href="fix_nh_eff.html"><span class="doc">nvt/eff</span></a></td>
+<td><a class="reference internal" href="fix_nvt_sllod_eff.html"><span class="doc">nvt/sllod/eff</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_nvt_sllod_eff.html"><span class="doc">nvt/sllod/eff</span></a></td>
-<td><a class="reference internal" href="fix_phonon.html"><span class="doc">phonon</span></a></td>
+<tr class="row-even"><td><a class="reference internal" href="fix_phonon.html"><span class="doc">phonon</span></a></td>
 <td><a class="reference internal" href="fix_pimd.html"><span class="doc">pimd</span></a></td>
 <td><a class="reference internal" href="fix_qbmsst.html"><span class="doc">qbmsst</span></a></td>
 <td><a class="reference internal" href="fix_qeq_reax.html"><span class="doc">qeq/reax</span></a></td>
 <td><a class="reference internal" href="fix_qmmm.html"><span class="doc">qmmm</span></a></td>
+<td><a class="reference internal" href="fix_qtb.html"><span class="doc">qtb</span></a></td>
 </tr>
-<tr class="row-odd"><td><a class="reference internal" href="fix_qtb.html"><span class="doc">qtb</span></a></td>
-<td><a class="reference internal" href="fix_reax_bonds.html"><span class="doc">reax/c/bonds</span></a></td>
+<tr class="row-odd"><td><a class="reference internal" href="fix_reax_bonds.html"><span class="doc">reax/c/bonds</span></a></td>
 <td><a class="reference internal" href="fix_reaxc_species.html"><span class="doc">reax/c/species</span></a></td>
 <td><a class="reference internal" href="fix_saed_vtk.html"><span class="doc">saed/vtk</span></a></td>
 <td><a class="reference internal" href="fix_shardlow.html"><span class="doc">shardlow</span></a></td>
 <td><a class="reference internal" href="fix_smd.html"><span class="doc">smd</span></a></td>
+<td><a class="reference internal" href="fix_smd_adjust_dt.html"><span class="doc">smd/adjust/dt</span></a></td>
 </tr>
-<tr class="row-even"><td><a class="reference internal" href="fix_smd_adjust_dt.html"><span class="doc">smd/adjust/dt</span></a></td>
-<td><a class="reference internal" href="fix_smd_integrate_tlsph.html"><span class="doc">smd/integrate/tlsph</span></a></td>
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