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doc/Manual.html
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@ -32,7 +32,7 @@
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@ -135,7 +135,7 @@
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<div class="section" id="dec-2015-version"> <div class="section" id="dec-2015-version">
<h2>9 Dec 2015 version<a class="headerlink" href="#dec-2015-version" title="Permalink to this headline"></a></h2> <h2>11 Dec 2015 version<a class="headerlink" href="#dec-2015-version" title="Permalink to this headline"></a></h2>
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<h2>Version info:<a class="headerlink" href="#version-info" title="Permalink to this headline"></a></h2> <h2>Version info:<a class="headerlink" href="#version-info" title="Permalink to this headline"></a></h2>
@ -422,7 +422,7 @@ it gives quick access to documentation for all LAMMPS commands.</p>
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@ -21,7 +21,7 @@
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LAMMPS Documentation :c,h3 LAMMPS Documentation :c,h3
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Version info: :h4 Version info: :h4

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@ -32,7 +32,7 @@
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@ -32,7 +32,7 @@
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@ -1502,7 +1502,7 @@ KOKKOS, o = USER-OMP, t = OPT.</p>
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@ -6344,7 +6344,7 @@ infinity.</dd>
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@ -367,7 +367,7 @@ packages.</p>
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@ -279,7 +279,7 @@ internally. A brief listing of their features is given here.</p>
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@ -2856,7 +2856,7 @@ Phys, 79, 926 (1983).</p>
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@ -661,7 +661,7 @@ version of LAMMPS were the following:</p>
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@ -1557,7 +1557,7 @@ you have questions.</p>
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@ -1955,7 +1955,7 @@ close if you have setup the problem for both codes the same.</p>
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@ -673,7 +673,7 @@ distributing his great tool!</p>
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@ -338,7 +338,7 @@ occurs, the faster your simulation will run.</li>
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COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>5.USER-OMP package &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>5.USER-OMP package &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -303,7 +303,7 @@ MPI tasks to a (multi-core) socket, should solve this issue.</li>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>5.OPT package &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>5.OPT package &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -205,7 +205,7 @@ of a run. On most machines for reasonable problem sizes, it will be a
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style charmm command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style charmm command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -230,7 +230,7 @@ Fischer, Gao, Guo, Ha, et al, J Phys Chem, 102, 3586 (1998).</p>
<script type="text/javascript"> <script type="text/javascript">
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style class2 command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style class2 command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -257,7 +257,7 @@ for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_coeff command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_coeff command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -245,7 +245,7 @@ set, either in the input script or in a data file.</p>
<script type="text/javascript"> <script type="text/javascript">
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -215,7 +215,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine/delta command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine/delta command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -219,7 +219,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine/periodic command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine/periodic command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -229,7 +229,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine/shift command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine/shift command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -220,7 +220,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine/shift/exp command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine/shift/exp command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -231,7 +231,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style cosine/squared command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style cosine/squared command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -219,7 +219,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style dipole command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style dipole command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -258,7 +258,7 @@ Clarendon Press, Oxford, 1987.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style fourier command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style fourier command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -216,7 +216,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style fourier/simple command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style fourier/simple command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -215,7 +215,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style harmonic command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style harmonic command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -224,7 +224,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style hybrid command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style hybrid command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -240,7 +240,7 @@ file, you need to re-specify angle_coeff commands.</p>
<script type="text/javascript"> <script type="text/javascript">
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style none command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style none command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -184,7 +184,7 @@ if triplets of angle atoms were listed in the data file read by the
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style quartic command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style quartic command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -222,7 +222,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style sdk command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style sdk command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -208,7 +208,7 @@ USER-CG-CMM package. See the <a class="reference internal" href="Section_start.
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -243,7 +243,7 @@ package.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>angle_style table command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>angle_style table command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -293,7 +293,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>atom_modify command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>atom_modify command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -309,7 +309,7 @@ cutoff will be used to set the bin size.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>atom_style command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>atom_style command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -448,7 +448,7 @@ only enabled if LAMMPS was built with that package. See the <a class="reference
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>balance command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>balance command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -508,7 +508,7 @@ appear in <em>dimstr</em> for the <em>shift</em> style.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Body particles &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>Body particles &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -303,7 +303,7 @@ current COM and orientiation of the body particle.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style class2 command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style class2 command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -222,7 +222,7 @@ for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_coeff command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_coeff command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -242,7 +242,7 @@ either in the input script or in a data file.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style fene command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style fene command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -230,7 +230,7 @@ style. LAMMPS will issue a warning it that&#8217;s not the case.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style fene/expand command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style fene/expand command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -231,7 +231,7 @@ style. LAMMPS will issue a warning it that&#8217;s not the case.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style harmonic command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style harmonic command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -220,7 +220,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style harmonic/shift command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style harmonic/shift command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -222,7 +222,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style harmonic/shift/cut command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style harmonic/shift/cut command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -223,7 +223,7 @@ section for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style hybrid command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style hybrid command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -223,7 +223,7 @@ file, you need to re-specify bond_coeff commands.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style morse command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style morse command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -218,7 +218,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style none command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style none command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -184,7 +184,7 @@ pairs of bonded atoms were listed in the data file read by the
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style nonlinear command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style nonlinear command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -220,7 +220,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style quartic command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style quartic command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -252,7 +252,7 @@ dihedral, etc) cannot be used with <em>quartic</em> bonds.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -251,7 +251,7 @@ package.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>bond_style table command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>bond_style table command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -290,7 +290,7 @@ MOLECULE package (which it is by default). See the <a class="reference internal
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>boundary command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>boundary command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -248,7 +248,7 @@ of lost atoms.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>box command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>box command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -212,7 +212,7 @@ error.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>change_box command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>change_box command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -466,7 +466,7 @@ change_box command is issued, so long as an <a class="reference internal" href="
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>clear command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>clear command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -192,7 +192,7 @@ input script variables (<a class="reference internal" href="variable.html"><em>v
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>comm_modify command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>comm_modify command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -307,7 +307,7 @@ cutoff = pairwise force cutoff + neighbor skin.</p>
<script type="text/javascript"> <script type="text/javascript">
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URL_ROOT:'./', URL_ROOT:'./',
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6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>comm_style command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>comm_style command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -217,7 +217,7 @@ commands. The decomposition can be changed via the
<script type="text/javascript"> <script type="text/javascript">
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6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -395,7 +395,7 @@ section of <a class="reference internal" href="Section_commands.html#cmd-5"><spa
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute ackland/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute ackland/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -218,7 +218,7 @@ integers defined above.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute angle/local command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute angle/local command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -226,7 +226,7 @@ be in energy <a class="reference internal" href="units.html"><em>units</em></a>.
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
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FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute angmom/chunk command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute angmom/chunk command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -236,7 +236,7 @@ mass-velocity-distance <a class="reference internal" href="units.html"><em>units
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
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6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute basal/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute basal/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -216,7 +216,7 @@ well-defined basal plane.</p>
<script type="text/javascript"> <script type="text/javascript">
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute body/local command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute body/local command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -238,7 +238,7 @@ options.</p>
<script type="text/javascript"> <script type="text/javascript">
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URL_ROOT:'./', URL_ROOT:'./',
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6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute bond/local command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute bond/local command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -234,7 +234,7 @@ output for <em>eng</em> will be in energy <a class="reference internal" href="un
<script type="text/javascript"> <script type="text/javascript">
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URL_ROOT:'./', URL_ROOT:'./',
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute centro/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute centro/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -263,7 +263,7 @@ of 12.</p>
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute chunk/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute chunk/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -149,17 +149,17 @@ style = <em>bin/1d</em> or <em>bin/2d</em> or <em>bin/3d</em> or <em>bin/sphere<
dim = <em>x</em> or <em>y</em> or <em>z</em> dim = <em>x</em> or <em>y</em> or <em>z</em>
origin = <em>lower</em> or <em>center</em> or <em>upper</em> or coordinate value (distance units) origin = <em>lower</em> or <em>center</em> or <em>upper</em> or coordinate value (distance units)
delta = thickness of spatial bins in dim (distance units) delta = thickness of spatial bins in dim (distance units)
<em>bin/sphere</em> args = xorig yorig zorig rmin rmax nrbin <em>bin/sphere</em> args = xorig yorig zorig rmin rmax nsbin
xorig,yorig,zorig = center point of sphere xorig,yorig,zorig = center point of sphere
srmin,srmax = bin from sphere radius rmin to rmax srmin,srmax = bin from sphere radius rmin to rmax
nsbin = # of bins between rmin and rmax nsbin = # of spherical shell bins between rmin and rmax
<em>bin/cylinder</em> args = dim origin delta c1 c2 rmin rmax nrbin <em>bin/cylinder</em> args = dim origin delta c1 c2 rmin rmax ncbin
dim = <em>x</em> or <em>y</em> or <em>z</em> = axis of cylinder axis dim = <em>x</em> or <em>y</em> or <em>z</em> = axis of cylinder axis
origin = <em>lower</em> or <em>center</em> or <em>upper</em> or coordinate value (distance units) origin = <em>lower</em> or <em>center</em> or <em>upper</em> or coordinate value (distance units)
delta = thickness of spatial bins in dim (distance units) delta = thickness of spatial bins in dim (distance units)
c1,c2 = coords of cylinder axis in other 2 dimensions (distance units) c1,c2 = coords of cylinder axis in other 2 dimensions (distance units)
crmin,crmax = bin from cylinder radius rmin to rmax (distance units) crmin,crmax = bin from cylinder radius rmin to rmax (distance units)
ncbin = # of bins between rmin and rmax ncbin = # of concentric circle bins between rmin and rmax
<em>type</em> args = none <em>type</em> args = none
<em>molecule</em> args = none <em>molecule</em> args = none
<em>compute/fix/variable</em> = c_ID, c_ID[I], f_ID, f_ID[I], v_name with no args <em>compute/fix/variable</em> = c_ID, c_ID[I], f_ID, f_ID[I], v_name with no args
@ -288,9 +288,9 @@ box and an <em>origin</em> of 1.0 means to start layers at the upper &#8220;b&#8
cross &#8220;c&#8221; face of the box. A <em>delta</em> value of 0.1 in <em>reduced</em> units cross &#8220;c&#8221; face of the box. A <em>delta</em> value of 0.1 in <em>reduced</em> units
means there will be 10 layers from 0.0 to 1.0, regardless of the means there will be 10 layers from 0.0 to 1.0, regardless of the
current size or shape of the simulation box.</p> current size or shape of the simulation box.</p>
<p>The <em>bin/sphere</em> style defines a set of spherical shells around the <p>The <em>bin/sphere</em> style defines a set of spherical shell bins around
origin (<em>xorig</em>,*yorig*,*zorig*), using <em>nsbin</em> shells with radii the origin (<em>xorig</em>,*yorig*,*zorig*), using <em>nsbin</em> bins with radii
equally spaced between <em>srmin</em> and <em>srmax</em>, for effectively a 1d equally spaced between <em>srmin</em> and <em>srmax</em>. This is effectively a 1d
vector of bins. For example, if <em>srmin</em> = 1.0 and <em>srmax</em> = 10.0 and vector of bins. For example, if <em>srmin</em> = 1.0 and <em>srmax</em> = 10.0 and
<em>nsbin</em> = 9, then the first bin spans 1.0 &lt; r &lt; 2.0, and the last bin <em>nsbin</em> = 9, then the first bin spans 1.0 &lt; r &lt; 2.0, and the last bin
spans 9.0 &lt; r 10.0. The geometry of the bins is the same whether the spans 9.0 &lt; r 10.0. The geometry of the bins is the same whether the
@ -298,29 +298,30 @@ simulation box is orthogonal or triclinic; i.e. the spherical shells
are not tilted or scaled differently in different dimensions to are not tilted or scaled differently in different dimensions to
transform them into ellipsoidal shells.</p> transform them into ellipsoidal shells.</p>
<p>The <em>bin/cylinder</em> style defines bins for a cylinder oriented along <p>The <em>bin/cylinder</em> style defines bins for a cylinder oriented along
the axis <em>dim</em> with the axis position in the other two radial the axis <em>dim</em> with the axis coordinates in the other two radial
dimensions at (<em>c1</em>,*c2*). For dim = x, c1/c2 = y/z; for dim = y, dimensions at (<em>c1</em>,*c2*). For dim = x, c1/c2 = y/z; for dim = y,
c1/c2 = x/z; for dim = z, c1/c2 = x/y. These can be thought of as a c1/c2 = x/z; for dim = z, c1/c2 = x/y. This is effectively a 2d array
2d array of bins, each of which is a pie-shaped wedge (radial of bins. The first dimension is along the cylinder axis, the second
dimensions) of finite height (along the cylinder axis). The bin size dimension is radially outward from the cylinder axis. The bin size
and positions along the cylinder axis are specified by the <em>origin</em> and positions along the cylinder axis are specified by the <em>origin</em>
and <em>delta</em> values, the same as for the <em>bin/1d</em>, <em>bin/2d</em>, and and <em>delta</em> values, the same as for the <em>bin/1d</em>, <em>bin/2d</em>, and
<em>bin/3d</em> styles. There are <em>ncbin</em> concentric circles in the radial <em>bin/3d</em> styles. There are <em>ncbin</em> concentric circle bins in the
direction from the cylinder axis with radii equally spaced between radial direction from the cylinder axis with radii equally spaced
<em>crmin</em> and <em>crmax</em>. For example, if <em>crmin</em> = 1.0 and <em>crmax</em> = 10.0 between <em>crmin</em> and <em>crmax</em>. For example, if <em>crmin</em> = 1.0 and
and <em>ncbin</em> = 9, then the first bin spans 1.0 &lt; r &lt; 2.0, and the last <em>crmax</em> = 10.0 and <em>ncbin</em> = 9, then the first bin spans 1.0 &lt; r &lt;
bin spans 9.0 &lt; r 10.0. The geometry of the bins in the radial 2.0, and the last bin spans 9.0 &lt; r 10.0. The geometry of the bins in
dimensions is the same whether the simulation box is orthogonal or the radial dimensions is the same whether the simulation box is
triclinic; i.e. the circles are not tilted or scaled differently in orthogonal or triclinic; i.e. the concetric circles are not tilted or
the two different dimensions to transform them into ellipses.</p> scaled differently in the two different dimensions to transform them
into ellipses.</p>
<p>The created bins (and hence the chunk IDs) are numbered consecutively <p>The created bins (and hence the chunk IDs) are numbered consecutively
from 1 to the number of bins = <em>Nchunk</em>. For 2d and 3d bins, the from 1 to the number of bins = <em>Nchunk</em>. For <em>bin2d</em> and <em>bin3d</em>, the
numbering varies most rapidly in the first dimension (which could be numbering varies most rapidly in the first dimension (which could be
x, y, or z), next rapidly in the 2nd dimension, and most slowly in the x, y, or z), next rapidly in the 2nd dimension, and most slowly in the
3rd dimension. For spherical 1d bins, the innermost shell is chunk 1 3rd dimension. For <em>bin/sphere</em>, the bin with smallest radii is chunk
and the outermost shell is chunk Nchunk = <em>nsbin</em>. For cylindrical 1 and the bni with largest radii is chunk Nchunk = <em>ncbin</em>. For
2d bins, the numbering varies most rapidly in the dimension along the <em>bin/cylinder</em>, the numbering varies most rapidly in the dimension
cylinder axis and most slowly in the radial direction.</p> along the cylinder axis and most slowly in the radial direction.</p>
<p>Each time this compute is invoked, each atom is mapped to a bin based <p>Each time this compute is invoked, each atom is mapped to a bin based
on its current position. Note that between reneighboring timesteps, on its current position. Note that between reneighboring timesteps,
atoms can move outside the current simulation box. If the box is atoms can move outside the current simulation box. If the box is
@ -718,7 +719,7 @@ the restarted simulation begins.</p>
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@ -27,17 +27,17 @@ style = {bin/1d} or {bin/2d} or {bin/3d} or {bin/sphere} or {type} or {molecule}
dim = {x} or {y} or {z} dim = {x} or {y} or {z}
origin = {lower} or {center} or {upper} or coordinate value (distance units) origin = {lower} or {center} or {upper} or coordinate value (distance units)
delta = thickness of spatial bins in dim (distance units) delta = thickness of spatial bins in dim (distance units)
{bin/sphere} args = xorig yorig zorig rmin rmax nrbin {bin/sphere} args = xorig yorig zorig rmin rmax nsbin
xorig,yorig,zorig = center point of sphere xorig,yorig,zorig = center point of sphere
srmin,srmax = bin from sphere radius rmin to rmax srmin,srmax = bin from sphere radius rmin to rmax
nsbin = # of bins between rmin and rmax nsbin = # of spherical shell bins between rmin and rmax
{bin/cylinder} args = dim origin delta c1 c2 rmin rmax nrbin {bin/cylinder} args = dim origin delta c1 c2 rmin rmax ncbin
dim = {x} or {y} or {z} = axis of cylinder axis dim = {x} or {y} or {z} = axis of cylinder axis
origin = {lower} or {center} or {upper} or coordinate value (distance units) origin = {lower} or {center} or {upper} or coordinate value (distance units)
delta = thickness of spatial bins in dim (distance units) delta = thickness of spatial bins in dim (distance units)
c1,c2 = coords of cylinder axis in other 2 dimensions (distance units) c1,c2 = coords of cylinder axis in other 2 dimensions (distance units)
crmin,crmax = bin from cylinder radius rmin to rmax (distance units) crmin,crmax = bin from cylinder radius rmin to rmax (distance units)
ncbin = # of bins between rmin and rmax ncbin = # of concentric circle bins between rmin and rmax
{type} args = none {type} args = none
{molecule} args = none {molecule} args = none
{compute/fix/variable} = c_ID, c_ID\[I\], f_ID, f_ID\[I\], v_name with no args {compute/fix/variable} = c_ID, c_ID\[I\], f_ID, f_ID\[I\], v_name with no args
@ -183,9 +183,9 @@ cross "c" face of the box. A {delta} value of 0.1 in {reduced} units
means there will be 10 layers from 0.0 to 1.0, regardless of the means there will be 10 layers from 0.0 to 1.0, regardless of the
current size or shape of the simulation box. current size or shape of the simulation box.
The {bin/sphere} style defines a set of spherical shells around the The {bin/sphere} style defines a set of spherical shell bins around
origin ({xorig},{yorig},{zorig}), using {nsbin} shells with radii the origin ({xorig},{yorig},{zorig}), using {nsbin} bins with radii
equally spaced between {srmin} and {srmax}, for effectively a 1d equally spaced between {srmin} and {srmax}. This is effectively a 1d
vector of bins. For example, if {srmin} = 1.0 and {srmax} = 10.0 and vector of bins. For example, if {srmin} = 1.0 and {srmax} = 10.0 and
{nsbin} = 9, then the first bin spans 1.0 < r < 2.0, and the last bin {nsbin} = 9, then the first bin spans 1.0 < r < 2.0, and the last bin
spans 9.0 < r 10.0. The geometry of the bins is the same whether the spans 9.0 < r 10.0. The geometry of the bins is the same whether the
@ -194,30 +194,31 @@ are not tilted or scaled differently in different dimensions to
transform them into ellipsoidal shells. transform them into ellipsoidal shells.
The {bin/cylinder} style defines bins for a cylinder oriented along The {bin/cylinder} style defines bins for a cylinder oriented along
the axis {dim} with the axis position in the other two radial the axis {dim} with the axis coordinates in the other two radial
dimensions at ({c1},{c2}). For dim = x, c1/c2 = y/z; for dim = y, dimensions at ({c1},{c2}). For dim = x, c1/c2 = y/z; for dim = y,
c1/c2 = x/z; for dim = z, c1/c2 = x/y. These can be thought of as a c1/c2 = x/z; for dim = z, c1/c2 = x/y. This is effectively a 2d array
2d array of bins, each of which is a pie-shaped wedge (radial of bins. The first dimension is along the cylinder axis, the second
dimensions) of finite height (along the cylinder axis). The bin size dimension is radially outward from the cylinder axis. The bin size
and positions along the cylinder axis are specified by the {origin} and positions along the cylinder axis are specified by the {origin}
and {delta} values, the same as for the {bin/1d}, {bin/2d}, and and {delta} values, the same as for the {bin/1d}, {bin/2d}, and
{bin/3d} styles. There are {ncbin} concentric circles in the radial {bin/3d} styles. There are {ncbin} concentric circle bins in the
direction from the cylinder axis with radii equally spaced between radial direction from the cylinder axis with radii equally spaced
{crmin} and {crmax}. For example, if {crmin} = 1.0 and {crmax} = 10.0 between {crmin} and {crmax}. For example, if {crmin} = 1.0 and
and {ncbin} = 9, then the first bin spans 1.0 < r < 2.0, and the last {crmax} = 10.0 and {ncbin} = 9, then the first bin spans 1.0 < r <
bin spans 9.0 < r 10.0. The geometry of the bins in the radial 2.0, and the last bin spans 9.0 < r 10.0. The geometry of the bins in
dimensions is the same whether the simulation box is orthogonal or the radial dimensions is the same whether the simulation box is
triclinic; i.e. the circles are not tilted or scaled differently in orthogonal or triclinic; i.e. the concetric circles are not tilted or
the two different dimensions to transform them into ellipses. scaled differently in the two different dimensions to transform them
into ellipses.
The created bins (and hence the chunk IDs) are numbered consecutively The created bins (and hence the chunk IDs) are numbered consecutively
from 1 to the number of bins = {Nchunk}. For 2d and 3d bins, the from 1 to the number of bins = {Nchunk}. For {bin2d} and {bin3d}, the
numbering varies most rapidly in the first dimension (which could be numbering varies most rapidly in the first dimension (which could be
x, y, or z), next rapidly in the 2nd dimension, and most slowly in the x, y, or z), next rapidly in the 2nd dimension, and most slowly in the
3rd dimension. For spherical 1d bins, the innermost shell is chunk 1 3rd dimension. For {bin/sphere}, the bin with smallest radii is chunk
and the outermost shell is chunk Nchunk = {nsbin}. For cylindrical 1 and the bni with largest radii is chunk Nchunk = {ncbin}. For
2d bins, the numbering varies most rapidly in the dimension along the {bin/cylinder}, the numbering varies most rapidly in the dimension
cylinder axis and most slowly in the radial direction. along the cylinder axis and most slowly in the radial direction.
Each time this compute is invoked, each atom is mapped to a bin based Each time this compute is invoked, each atom is mapped to a bin based
on its current position. Note that between reneighboring timesteps, on its current position. Note that between reneighboring timesteps,

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute cluster/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute cluster/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -226,7 +226,7 @@ LAMMPS output options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute cna/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute cna/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -238,7 +238,7 @@ above.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute com command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute com command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -210,7 +210,7 @@ distance <a class="reference internal" href="units.html"><em>units</em></a>.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute com/chunk command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute com/chunk command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -234,7 +234,7 @@ distance <a class="reference internal" href="units.html"><em>units</em></a>.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute contact/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute contact/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -203,7 +203,7 @@ above.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute coord/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute coord/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -242,7 +242,7 @@ explained above.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute damage/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute damage/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -206,7 +206,7 @@ LAMMPS was built with that package. See the <a class="reference internal" href=
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute dihedral/local command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute dihedral/local command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -219,7 +219,7 @@ options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute dilatation/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute dilatation/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -208,7 +208,7 @@ LAMMPS was built with that package. See the <a class="reference internal" href=
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute displace/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute displace/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -222,7 +222,7 @@ options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute erotate/asphere command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute erotate/asphere command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -216,7 +216,7 @@ particles.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute erotate/rigid command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute erotate/rigid command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -208,7 +208,7 @@ LAMMPS was built with that package. See the <a class="reference internal" href=
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute erotate/sphere command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute erotate/sphere command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -208,7 +208,7 @@ contribute to the rotational energy.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute erotate/sphere/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute erotate/sphere/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -207,7 +207,7 @@ LAMMPS output options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute event/displace command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute event/displace command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -214,7 +214,7 @@ for more info on packages.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute fep command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute fep command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -413,7 +413,7 @@ Liquids, Oxford University Press (1987)</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute group/group command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute group/group command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -261,7 +261,7 @@ The <em>ewald</em> and <em>pppm</em> styles do.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute gyration command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute gyration command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -222,7 +222,7 @@ distance^2 <a class="reference internal" href="units.html"><em>units</em></a> re
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute gyration/chunk command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute gyration/chunk command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -253,7 +253,7 @@ represented by the formula above.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute heat/flux command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute heat/flux command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -336,7 +336,7 @@ print &quot;average conductivity: $k[W/mK] @ $T K, ${ndens} /A^3&quot;
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute hexorder/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute hexorder/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -262,7 +262,7 @@ options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
doc/compute_improper_local.html
View File

@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute improper/local command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute improper/local command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -219,7 +219,7 @@ options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
doc/compute_inertia_chunk.html
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute inertia/chunk command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute inertia/chunk command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -235,7 +235,7 @@ mass*distance^2 <a class="reference internal" href="units.html"><em>units</em></
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
doc/compute_ke.html
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@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute ke command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute ke command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -211,7 +211,7 @@ scalar value will be in energy <a class="reference internal" href="units.html"><
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
doc/compute_ke_atom.html
View File

@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute ke/atom command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute ke/atom command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -200,7 +200,7 @@ LAMMPS output options.</p>
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

6
doc/compute_ke_atom_eff.html
View File

@ -8,7 +8,7 @@
<meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>compute ke/atom/eff command &mdash; LAMMPS 9 Dec 2015 documentation</title> <title>compute ke/atom/eff command &mdash; LAMMPS 11 Dec 2015 documentation</title>
@ -32,7 +32,7 @@
<link rel="top" title="LAMMPS 9 Dec 2015 documentation" href="index.html"/> <link rel="top" title="LAMMPS 11 Dec 2015 documentation" href="index.html"/>
<script src="_static/js/modernizr.min.js"></script> <script src="_static/js/modernizr.min.js"></script>
@ -225,7 +225,7 @@ LAMMPS was built with that package. See the <a class="reference internal" href=
<script type="text/javascript"> <script type="text/javascript">
var DOCUMENTATION_OPTIONS = { var DOCUMENTATION_OPTIONS = {
URL_ROOT:'./', URL_ROOT:'./',
VERSION:'9 Dec 2015', VERSION:'11 Dec 2015',
COLLAPSE_INDEX:false, COLLAPSE_INDEX:false,
FILE_SUFFIX:'.html', FILE_SUFFIX:'.html',
HAS_SOURCE: true HAS_SOURCE: true

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