update PIMD example1
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@ -1,5 +1,5 @@
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variable ibead uloop 32 pad
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variable ibead uloop 32 pad
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variable out_freq string 1
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variable out_freq string 100
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variable job_name string H2
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variable job_name string H2
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units real
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units real
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@ -13,17 +13,17 @@ read_data H2.data
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pair_coeff 1 * pair.table PAIR_H2
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pair_coeff 1 * pair.table PAIR_H2
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timestep 0.001
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timestep 0.001
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thermo_style custom step temp pe etotal pzz
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thermo_style custom step temp pe etotal pzz
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thermo ${out_freq}
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thermo ${out_freq}
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velocity all create 1.0 1985 rot yes dist gaussian
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velocity all create 1.0 1985 rot yes dist gaussian
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fix 1 all pimd method nmpimd fmass 1.0 temp 25.0 nhc 4
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fix 1 all pimd method nmpimd fmass 1.0 temp 25.0 nhc 4
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dump dcd all dcd ${out_freq} dcd/${job_name}_${ibead}.dcd
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#dump dcd all dcd ${out_freq} ${job_name}_${ibead}.dcd
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restart ${out_freq} restart/${job_name}_${ibead}.restart1 restart/${job_name}_${ibead}.restart2
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#restart ${out_freq} ${job_name}_${ibead}.restart1 ${job_name}_${ibead}.restart2
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run 100000
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run 10000
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