ICODE-ADC/lammps
4
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

fix variable name bug and synchronize with other ported Install.py files

Browse Source
This commit is contained in:
Axel Kohlmeyer
2017-07-18 18:06:18 -04:00
parent 7ccb0d37cd
commit 81f342aafa
1 changed files with 28 additions and 42 deletions
Download Patch File Download Diff File Expand all files Collapse all files

70
lib/kim/Install.py
View File

@ -3,7 +3,9 @@
# install.pa tool to setup the kim-api library
# used to automate the steps described in the README file in this dir
from __future__ import print_function
import sys,os,re,urllib,subprocess
import sys,os,re,subprocess
try: from urllib.request import urlretrieve as geturl
except: from urllib import urlretrieve as geturl
help = """
Syntax from src dir: make lib-kim args="-v version -b kim-install-dir kim-name -a kim-name"
@ -97,10 +99,10 @@ if buildflag:
# configure LAMMPS to use kim-api to be installed
with open("%s/Makefile.KIM_DIR" % thisdir, 'w') as mkfile:
mkfle.write("KIM_INSTALL_DIR=%s\n\n" % dir)
mkfle.write(".DUMMY: print_dir\n\n")
mkfle.write("print_dir:\n")
mkfle.write(" @printf $(KIM_INSTALL_DIR)\n")
mkfile.write("KIM_INSTALL_DIR=%s\n\n" % dir)
mkfile.write(".DUMMY: print_dir\n\n")
mkfile.write("print_dir:\n")
mkfile.write(" @printf $(KIM_INSTALL_DIR)\n")
with open("%s/Makefile.KIM_Config" % thisdir, 'w') as cfgfile:
cfgfile.write("include %s/lib/kim-api/Makefile.KIM_Config" % dir)
@ -113,27 +115,23 @@ if buildflag:
print("Downloading kim-api tarball ...")
try: urllib.urlretrieve(url,"%s/%s.tgz" % (thisdir,version))
try: geturl(url,"%s/%s.tgz" % (thisdir,version))
except:
cmd = "wget %s %s/%s.tgz" % (url,thisdir,version)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
subprocess.check_output(cmd,shell=True)
if not os.path.isfile("%s/%s.tgz" % (thisdir,version)):
print("Both urllib.urlretrieve() and wget command failed to download")
print("Both urllib and wget command failed to download")
sys.exit()
print("Unpacking kim-api tarball ...")
cmd = "cd %s; rm -rf %s; tar zxvf %s.tgz" % (thisdir,version,version)
txt = subprocess.getstatusoutput(cmd)
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
# configure kim-api
print("Configuring kim-api ...")
cmd = "cd %s/%s; ./configure --prefix='%s'" % (thisdir,version,dir)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
# build kim-api
@ -145,36 +143,26 @@ if buildflag:
print("configuring all OpenKIM models, this will take a while ...")
cmd = "cd %s/%s; make add-examples; make add-%s" % \
(thisdir,version,modelname)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
print("Building kim-api ...")
cmd = "cd %s/%s; make" % (thisdir,version)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
# install kim-api
print("Installing kim-api ...")
cmd = "cd %s/%s; make install" % (thisdir,version)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
cmd = "cd %s/%s; make install-set-default-to-v1" %(thisdir,version)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
# remove source files
print("Removing kim-api source and build files ...")
cmd = "cd %s; rm -rf %s; rm -rf %s.tgz" % (thisdir,version,version)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
# add a single model (and possibly its driver) to existing KIM installation
@ -187,7 +175,7 @@ if addflag:
error()
else:
cmd = "cd %s; make -f Makefile.KIM_DIR print_dir" % thisdir
dir = subprocess.getstatusoutput(cmd)[1]
dir = subprocess.check_output(cmd,shell=True)[1]
# download single model
# try first via urllib
@ -197,10 +185,10 @@ if addflag:
url = "https://openkim.org/download/%s.tgz" % addmodelname
try: urllib.urlretrieve(url,"%s/%s.tgz" % (thisdir,addmodelname))
try: geturl(url,"%s/%s.tgz" % (thisdir,addmodelname))
except:
cmd = "wget %s %s/%s.tgz" % (url,thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
txt = subprocess.check_output(cmd,shell=True)
print(txt[1])
if not os.path.isfile("%s/%s.tgz" % (thisdir,addmodelname)):
print("Both urllib.urlretrieve() and wget command failed to download")
@ -208,28 +196,27 @@ if addflag:
print("Unpacking item tarball ...")
cmd = "cd %s; tar zxvf %s.tgz" % (thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)
print("Building item ...")
cmd = "cd %s/%s; make; make install" %(thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
subprocess.check_output(cmd,shell=True)
firstRunOutput = txt[1]
if txt[0] != 0:
# Error: but first, check to see if it needs a driver
cmd = "cd %s/%s; make kim-item-type" % (thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
txt = subprocess.check_output(cmd,shell=True)
if txt[1] == "ParameterizedModel":
# Get and install driver
cmd = "cd %s/%s; make model-driver-name" % (thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
txt = subprocess.check_output(cmd,shell=True)
adddrivername = txt[1]
print("First Installing model driver: %s" % adddrivername)
cmd = "cd %s; python Install.py -a %s" % (thisdir,adddrivername)
txt = subprocess.getstatusoutput(cmd)
txt = subprocess.check_output(cmd,shell=True)
if txt[0] != 0:
print(firstRunOutput)
print(txt[1])
@ -237,7 +224,7 @@ if addflag:
else:
print(txt[1])
cmd = "cd %s; python Install.py -a %s" % (thisdir,addmodelname)
txt = subprocess.getstatusoutput(cmd)
txt = subprocess.check_output(cmd,shell=True)
print(txt[1])
if txt[0] != 0:
error()
@ -251,6 +238,5 @@ if addflag:
print(firstRunOutput)
print("Removing kim item source and build files ...")
cmd = "cd %s; rm -rf %s; rm -rf %s.tgz" %(thisdir,addmodelname,addmodelname)
txt = subprocess.getstatusoutput(cmd)
print(txt[1])
if txt[0] != 0: error()
subprocess.check_output(cmd,shell=True)