complete moving packages and styles around

src/.gitignore

@@ -250,6 +250,61 @@
 /pair_mesont_tpm.cpp
 /pair_mesont_tpm.h
 
+/compute_contact_atom.cpp
+/compute_contact_atom.h
+/dump_dcd.cpp
+/dump_dcd.h
+/fix_controller.cpp
+/fix_controller.h
+/fix_drag.cpp
+/fix_drag.h
+/fix_numdiff.cpp
+/fix_numdiff.h
+/fix_nve_noforce.cpp
+/fix_nve_noforce.h
+/fix_spring_rg.cpp
+/fix_spring_rg.h
+/fix_temp_csld.cpp
+/fix_temp_csld.h
+/fix_temp_csvr.cpp
+/fix_temp_csvr.h
+/fix_tmd.cpp
+/fix_tmd.h
+/pair_born_coul_dsf.cpp
+/pair_born_coul_dsf.h
+/pair_born_coul_wolf.cpp
+/pair_born_coul_wolf.h
+/pair_coul_cut_global.cpp
+/pair_coul_cut_global.h
+/pair_coul_streitz.cpp
+/pair_coul_streitz.h
+/pair_gauss.cpp
+/pair_gauss.h
+/pair_lj96_cut.cpp
+/pair_lj96_cut.h
+/pair_lj_cubic.cpp
+/pair_lj_cubic.h
+/pair_lj_cut_coul_debye.cpp
+/pair_lj_cut_coul_debye.h
+/pair_lj_cut_coul_dsf.cpp
+/pair_lj_cut_coul_dsf.h
+/pair_lj_cut_coul_wolf.cpp
+/pair_lj_cut_coul_wolf.h
+/pair_lj_gromacs.cpp
+/pair_lj_gromacs.h
+/pair_lj_gromacs_could_gromacs.cpp
+/pair_lj_gromacs_could_gromacs.h
+/pair_lj_relres.cpp
+/pair_lj_relres.h
+/pair_lj_smooth.cpp
+/pair_lj_smooth.h
+/pair_lj_smooth_linear.cpp
+/pair_lj_smooth_linear.h
+/pair_mie_cut.cpp
+/pair_mie_cut.h
+/pair_ufm.cpp
+/pair_ufm.h
+
 /angle_cg_cmm.cpp
 /angle_cg_cmm.h
 /angle_charmm.cpp
@@ -578,12 +633,8 @@
 /fix_client_md.h
 /fix_cmap.cpp
 /fix_cmap.h
-/fix_deposit.cpp
-/fix_deposit.h
 /fix_dpd_energy.cpp
 /fix_dpd_energy.h
-/fix_efield.cpp
-/fix_efield.h
 /fix_electron_stopping.cpp
 /fix_electron_stopping.h
 /fix_electron_stopping_fit.cpp
@@ -592,8 +643,6 @@
 /fix_eos_cv.h
 /fix_eos_table.cpp
 /fix_eos_table.h
-/fix_evaporate.cpp
-/fix_evaporate.h
 /fix_ffl.cpp
 /fix_ffl.h
 /fix_filter_corotate.cpp
@@ -797,8 +846,6 @@
 /fix_tgnpt_drude.h
 /fix_tgnvt_drude.cpp
 /fix_tgnvt_drude.h
-/fix_thermal_conductivity.cpp
-/fix_thermal_conductivity.h
 /fix_ti_rs.cpp
 /fix_ti_rs.h
 /fix_ti_spring.cpp

src/Depend.sh

@@ -63,8 +63,11 @@ if (test $1 = "COLLOID") then
   depend OPENMP
 fi
 
+if (test $1 = "DIELECTRIC") then
+  depend OPENMP
+fi
+
 if (test $1 = "DIPOLE") then
-  depend USER-MISC
   depend OPENMP
 fi
 
@@ -72,6 +75,16 @@ if (test $1 = "DPD-BASIC") then
   depend GPU
 fi
 
+if (test $1 = "EXTRA-MOLECULE") then
+  depend GPU
+  depend OPENMP
+fi
+
+if (test $1 = "EXTRA-PAIR") then
+  depend GPU
+  depend OPENMP
+fi
+
 if (test $1 = "GRANULAR") then
   depend KOKKOS
   depend OPENMP
@@ -96,14 +109,13 @@ if (test $1 = "MANYBODY") then
   depend KOKKOS
   depend OPT
   depend QEQ
-  depend USER-MISC
   depend OPENMP
 fi
 
 if (test $1 = "MOLECULE") then
+  depend EXTRA-MOLECULE
   depend GPU
   depend KOKKOS
-  depend USER-MISC
   depend FEP
   depend OPENMP
   depend INTEL
@@ -146,12 +158,6 @@ if (test $1 = "FEP") then
   depend OPENMP
 fi
 
-if (test $1 = "USER-MISC") then
-  depend GPU
-  depend OPENMP
-  depend INTEL
-fi
-
 if (test $1 = "REAXFF") then
   depend KOKKOS
   depend OPENMP