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complete moving packages and styles around

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This commit is contained in:
Axel Kohlmeyer
2021-07-23 18:00:28 -04:00
parent d2684a2370
commit 852f18525d
276 changed files with 122 additions and 113 deletions
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src/compute_cluster_atom.h
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/* -*- c++ -*- ----------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
https://www.lammps.org/, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
#ifdef COMPUTE_CLASS
// clang-format off
ComputeStyle(cluster/atom,ComputeClusterAtom);
// clang-format on
#else
#ifndef LMP_COMPUTE_CLUSTER_ATOM_H
#define LMP_COMPUTE_CLUSTER_ATOM_H
#include "compute.h"
namespace LAMMPS_NS {
class ComputeClusterAtom : public Compute {
public:
ComputeClusterAtom(class LAMMPS *, int, char **);
~ComputeClusterAtom();
void init();
void init_list(int, class NeighList *);
void compute_peratom();
int pack_forward_comm(int, int *, double *, int, int *);
void unpack_forward_comm(int, int, double *);
double memory_usage();
private:
int nmax, commflag;
double cutsq;
class NeighList *list;
double *clusterID;
};
} // namespace LAMMPS_NS
#endif
#endif
/* ERROR/WARNING messages:
E: Illegal ... command
Self-explanatory. Check the input script syntax and compare to the
documentation for the command. You can use -echo screen as a
command-line option when running LAMMPS to see the offending line.
E: Cannot use compute cluster/atom unless atoms have IDs
Atom IDs are used to identify clusters.
E: Compute cluster/atom requires a pair style to be defined
This is so that the pair style defines a cutoff distance which
is used to find clusters.
E: Compute cluster/atom cutoff is longer than pairwise cutoff
Cannot identify clusters beyond cutoff.
W: More than one compute cluster/atom
It is not efficient to use compute cluster/atom more than once.
*/