git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15031 f3b2605a-c512-4ea7-a41b-209d697bcdaa
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@ -542,17 +542,21 @@ There are several options for outputting atom coordinates. The *x*\ ,
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appropriate distance :doc:`units <units>` (Angstroms, sigma, etc). Use
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*xs*\ , *ys*\ , *zs* if you want the coordinates "scaled" to the box size,
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so that each value is 0.0 to 1.0. If the simulation box is triclinic
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(tilted), then all atom coords will still be between 0.0 and 1.0. Use
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*xu*\ , *yu*\ , *zu* if you want the coordinates "unwrapped" by the image
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flags for each atom. Unwrapped means that if the atom has passed thru
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a periodic boundary one or more times, the value is printed for what
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the coordinate would be if it had not been wrapped back into the
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periodic box. Note that using *xu*\ , *yu*\ , *zu* means that the
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coordinate values may be far outside the box bounds printed with the
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snapshot. Using *xsu*\ , *ysu*\ , *zsu* is similar to using *xu*\ , *yu*\ , *zu*\ ,
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except that the unwrapped coordinates are scaled by the box size. Atoms
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that have passed through a periodic boundary will have the corresponding
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cooordinate increased or decreased by 1.0.
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(tilted), then all atom coords will still be between 0.0 and 1.0.
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I.e. actual unscaled (x,y,z) = xs*A + ys*B + zs*C, where (A,B,C) are
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the non-orthogonal vectors of the simulation box edges, as discussed
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in :ref:`Section howto 6.12 <howto_12>`.
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Use *xu*\ , *yu*\ , *zu* if you want the coordinates "unwrapped" by the
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image flags for each atom. Unwrapped means that if the atom has
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passed thru a periodic boundary one or more times, the value is
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printed for what the coordinate would be if it had not been wrapped
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back into the periodic box. Note that using *xu*\ , *yu*\ , *zu* means
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that the coordinate values may be far outside the box bounds printed
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with the snapshot. Using *xsu*\ , *ysu*\ , *zsu* is similar to using
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*xu*\ , *yu*\ , *zu*\ , except that the unwrapped coordinates are scaled by
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the box size. Atoms that have passed through a periodic boundary will
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have the corresponding cooordinate increased or decreased by 1.0.
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The image flags can be printed directly using the *ix*\ , *iy*\ , *iz*
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attributes. For periodic dimensions, they specify which image of the
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