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enable and apply clang-format to a whole bunch of small .cpp files in src/

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This commit is contained in:
Axel Kohlmeyer
2023-03-25 09:59:25 -04:00
parent 22a1cf935e
commit 8cd34af4f0
38 changed files with 604 additions and 645 deletions
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32
src/fix_read_restart.cpp
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@ -1,4 +1,3 @@
// clang-format off
/* ----------------------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
https://www.lammps.org/, Sandia National Laboratories
@ -23,11 +22,10 @@ using namespace FixConst;
/* ---------------------------------------------------------------------- */
FixReadRestart::FixReadRestart(LAMMPS *lmp, int narg, char **arg) :
Fix(lmp, narg, arg),
count(nullptr), extra(nullptr)
Fix(lmp, narg, arg), count(nullptr), extra(nullptr)
{
nextra = utils::inumeric(FLERR,arg[3],false,lmp);
int nfix = utils::inumeric(FLERR,arg[4],false,lmp);
nextra = utils::inumeric(FLERR, arg[3], false, lmp);
int nfix = utils::inumeric(FLERR, arg[4], false, lmp);
// perform initial allocation of atom-based array
// register with Atom class
@ -39,11 +37,11 @@ FixReadRestart::FixReadRestart(LAMMPS *lmp, int narg, char **arg) :
double **atom_extra = atom->extra;
int nlocal = atom->nlocal;
int i,j,m;
int i, j, m;
for (i = 0; i < nlocal; i++) {
m = 0;
for (j = 0; j < nfix; j++) m += static_cast<int> (atom_extra[i][m]);
for (j = 0; j < nfix; j++) m += static_cast<int>(atom_extra[i][m]);
count[i] = m;
for (j = 0; j < m; j++) extra[i][j] = atom_extra[i][j];
}
@ -55,7 +53,7 @@ FixReadRestart::~FixReadRestart()
{
// unregister callback to this fix from Atom class
atom->delete_callback(id,Atom::GROW);
atom->delete_callback(id, Atom::GROW);
// delete locally stored arrays
@ -77,8 +75,8 @@ int FixReadRestart::setmask()
double FixReadRestart::memory_usage()
{
double bytes = (double)atom->nmax*nextra * sizeof(double);
bytes += (double)atom->nmax * sizeof(int);
double bytes = (double) atom->nmax * nextra * sizeof(double);
bytes += (double) atom->nmax * sizeof(int);
return bytes;
}
@ -88,8 +86,8 @@ double FixReadRestart::memory_usage()
void FixReadRestart::grow_arrays(int nmax)
{
memory->grow(count,nmax,"read_restart:count");
memory->grow(extra,nmax,nextra,"read_restart:extra");
memory->grow(count, nmax, "read_restart:count");
memory->grow(extra, nmax, nextra, "read_restart:extra");
}
/* ----------------------------------------------------------------------
@ -109,8 +107,8 @@ void FixReadRestart::copy_arrays(int i, int j, int /*delflag*/)
int FixReadRestart::pack_exchange(int i, double *buf)
{
buf[0] = count[i];
for (int m = 0; m < count[i]; m++) buf[m+1] = extra[i][m];
return count[i]+1;
for (int m = 0; m < count[i]; m++) buf[m + 1] = extra[i][m];
return count[i] + 1;
}
/* ----------------------------------------------------------------------
@ -119,7 +117,7 @@ int FixReadRestart::pack_exchange(int i, double *buf)
int FixReadRestart::unpack_exchange(int nlocal, double *buf)
{
count[nlocal] = static_cast<int> (buf[0]);
for (int m = 0; m < count[nlocal]; m++) extra[nlocal][m] = buf[m+1];
return count[nlocal]+1;
count[nlocal] = static_cast<int>(buf[0]);
for (int m = 0; m < count[nlocal]; m++) extra[nlocal][m] = buf[m + 1];
return count[nlocal] + 1;
}