complete integration into manual
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@ -157,6 +157,7 @@ OPT.
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* :doc:`orient/fcc <fix_orient>`
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* :doc:`orient/eco <fix_orient_eco>`
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* :doc:`pafi <fix_pafi>`
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* :doc:`pair/tracker <fix_pair_tracker>`
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* :doc:`phonon <fix_phonon>`
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* :doc:`pimd <fix_pimd>`
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* :doc:`planeforce <fix_planeforce>`
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@ -266,6 +266,7 @@ OPT.
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* :doc:`tip4p/cut (o) <pair_coul>`
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* :doc:`tip4p/long (o) <pair_coul>`
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* :doc:`tip4p/long/soft (o) <pair_fep_soft>`
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* :doc:`tracker <pair_tracker>`
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* :doc:`tri/lj <pair_tri_lj>`
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* :doc:`ufm (got) <pair_ufm>`
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* :doc:`vashishta (gko) <pair_vashishta>`
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@ -300,6 +300,7 @@ accelerated styles exist.
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* :doc:`orient/fcc <fix_orient>` - add grain boundary migration force for FCC
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* :doc:`orient/eco <fix_orient_eco>` - add generalized grain boundary migration force
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* :doc:`pafi <fix_pafi>` - constrained force averages on hyper-planes to compute free energies (PAFI)
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* :doc:`pair/tracker <fix_pair_tracker>` - track properties of pairwise interactions
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* :doc:`phonon <fix_phonon>` - calculate dynamical matrix from MD simulations
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* :doc:`pimd <fix_pimd>` - Feynman path integral molecular dynamics
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* :doc:`planeforce <fix_planeforce>` - constrain atoms to move in a plane
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@ -331,6 +331,7 @@ accelerated styles exist.
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* :doc:`tip4p/cut <pair_coul>` - Coulomb for TIP4P water w/out LJ
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* :doc:`tip4p/long <pair_coul>` - long-range Coulomb for TIP4P water w/out LJ
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* :doc:`tip4p/long/soft <pair_fep_soft>` -
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* :doc:`tracker <pair_tracker>` - monitor information about pairwise interactions
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* :doc:`tri/lj <pair_tri_lj>` - LJ potential between triangles
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* :doc:`ufm <pair_ufm>` -
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* :doc:`vashishta <pair_vashishta>` - Vashishta 2-body and 3-body potential
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