diff --git a/doc/src/Developer_atom.rst b/doc/src/Developer_atom.rst index 704e4a8961..8bc187ae7f 100644 --- a/doc/src/Developer_atom.rst +++ b/doc/src/Developer_atom.rst @@ -44,7 +44,7 @@ When referring to individual atoms, they may be indexed by their local containing first all *owned* atoms (index < `Atom::nlocal`) and then all *ghost* atoms. The order of atoms in these arrays can change due to atoms migrating between between subdomains, atoms being added or -deleted, or atoms being sorted for better cach efficiency. Atoms are +deleted, or atoms being sorted for better cache efficiency. Atoms are globally uniquely identified by their *atom ID*. There may be multiple atoms with the same atom ID present, but only one of them may be an *owned* atom. @@ -79,7 +79,7 @@ Atom class versus AtomVec classes The `Atom` class contains all kinds of flags and counters about atoms in the system and that includes pointers to **all** per-atom properties -availabel for atoms. However, only a subset of these pointers are +available for atoms. However, only a subset of these pointers are non-NULL and which those are depends on the atom style. For each atom style there is a corresponding `AtomVecXXX` class derived from the `AtomVec` base class, where the XXX indicates the atom style. This diff --git a/doc/src/Howto_broken_bonds.rst b/doc/src/Howto_broken_bonds.rst index 9fcd676c36..2eb9f4bdf4 100644 --- a/doc/src/Howto_broken_bonds.rst +++ b/doc/src/Howto_broken_bonds.rst @@ -31,7 +31,7 @@ The :doc:`fix bond/break ` and :doc:`fix bond/react ` commands allow breaking of bonds within a molecular topology with may also define angles, dihedrals, etc. These commands update internal topology data structures to remove broken bonds, as -well as the appropriate angle, dihederal, etc interactions which +well as the appropriate angle, dihedral, etc interactions which include the bond. They also trigger a rebuild of the neighbor list when this occurs, to turn on the appropriate pairwise forces. diff --git a/doc/src/package.rst b/doc/src/package.rst index 14d978c3c9..6d425b63dd 100644 --- a/doc/src/package.rst +++ b/doc/src/package.rst @@ -561,7 +561,7 @@ The *sort* keyword determines whether the host or device performs atom sorting, see the :doc:`atom_modify sort ` command. The value options for the *sort* keyword are *no* or *device* similar to the *comm* keywords above. If a value of *host* is used it will be -automatically be changed to *no* since the *sort* keyword doesn't +automatically be changed to *no* since the *sort* keyword does not support *host* mode. The value of *no* will also always be used when running on the CPU, i.e. setting the value to *device* will have no effect if the simulation is running on the CPU. Not all fix styles with