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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5947 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2011-04-15 22:25:19 +00:00
parent 74c219743e
commit 8ff0659bae
62 changed files with 1016 additions and 822 deletions
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9
src/irregular.cpp
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@ -78,12 +78,13 @@ Irregular::~Irregular()
void Irregular::migrate_atoms()
{
// clear global->local map since atoms move to new procs
// zero out ghosts so map_set() at end will operate only on local atoms
// exchange() doesn't need to zero ghosts b/c borders()
// is called right after and it zeroes ghosts and calls map_set()
// clear old ghosts so map_set() at end will operate only on local atoms
// exchange() doesn't need to clear ghosts b/c borders()
// is called right after and it clears ghosts and calls map_set()
if (map_style) atom->map_clear();
atom->nghost = 0;
atom->avec->clear_bonus();
// subbox bounds for orthogonal or triclinic
@ -123,7 +124,7 @@ void Irregular::migrate_atoms()
sizes[nsendatom] = avec->pack_exchange(i,&buf_send[nsend]);
nsend += sizes[nsendatom];
nsendatom++;
avec->copy(nlocal-1,i);
avec->copy(nlocal-1,i,1);
nlocal--;
} else i++;
} else i++;