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replace tabs and remove trailing whitespace in lib folder with updated script

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This commit is contained in:
Axel Kohlmeyer
2021-08-22 20:45:24 -04:00
parent 30821b37e5
commit 92b5b159e5
311 changed files with 9176 additions and 9176 deletions
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72
lib/atc/PhysicsModel.h
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@ -13,28 +13,28 @@
#include "ATC_TypeDefs.h"
#include "Utility.h"
namespace ATC
namespace ATC
{
class ATC_Coupling;
//-------------------------------------------------------------------
// @class PhysicsModel
//-------------------------------------------------------------------
/**
* @brief An adaptor for the FE_Engine of the specific weak form of
* @brief An adaptor for the FE_Engine of the specific weak form of
* the continuum PDE for the FE_Engine.
* It is assumed that the PDE fits this template:
* DENSITY(FIELDS) FIELD_RATE
* DENSITY(FIELDS) FIELD_RATE
* = DIV FLUX(FIELDS, GRAD_FIELDS) + SOURCE(FIELDS,GRAD_FIELDS)
* + PRESCRIBED_SOURCE(X,t) + EXTRINSIC_SOURCE(FIELDS,GRAD_FIELDS)
* Also it is important to understand that the physics model only handles
* extrinsic fields or surrogates of intrinsic fields
*/
class PhysicsModel
class PhysicsModel
{
public:
// constructor
// constructor
PhysicsModel(std::string fileName);
// destructor
@ -44,7 +44,7 @@ namespace ATC
void parse_material_file(std::string fileName);
/** initialize */
void initialize(void);
void initialize(void);
// set timescale parameters based on a given lengthscale
virtual void set_timescales(const double /* lengthscale */) {};
@ -59,20 +59,20 @@ namespace ATC
const Material * material(const int index) const {return materials_[index];}
/** access to parameter values */
bool parameter_value(const std::string& name, double& value,
bool parameter_value(const std::string& name, double& value,
const int imat = 0) const ;
/** return fields ids and length */
void num_fields(std::map<FieldName,int> & fieldSizes,
void num_fields(std::map<FieldName,int> & fieldSizes,
Array2D<bool> & rhsMask) const;
/** is the material model linear */
bool is_linear(FieldName name) const {
bool is_linear(FieldName name) const {
std::vector< Material* >::const_iterator iter;
for (iter = materials_.begin(); iter != materials_.end(); iter++) {
Material * mat = *iter;
bool linear = mat->linear_flux(name)
&& mat->linear_source(name)
bool linear = mat->linear_flux(name)
&& mat->linear_source(name)
&& mat->constant_density(name);
if (! linear) return linear;
}
@ -80,7 +80,7 @@ namespace ATC
}
/** is rhs linear */
bool has_linear_rhs(FieldName name) const {
bool has_linear_rhs(FieldName name) const {
std::vector< Material* >::const_iterator iter;
for (iter = materials_.begin(); iter != materials_.end(); iter++) {
Material * mat = *iter;
@ -91,7 +91,7 @@ namespace ATC
}
/** is mass matrix constant */
bool has_constant_mass(FieldName name) const {
bool has_constant_mass(FieldName name) const {
std::vector< Material* >::const_iterator iter;
for (iter = materials_.begin(); iter != materials_.end(); iter++) {
Material * mat = *iter;
@ -103,21 +103,21 @@ namespace ATC
/** access to weak equations */
const WeakEquation * weak_equation(FieldName field) const
{
{
std::map<FieldName,WeakEquation *>::const_iterator itr = weakEqns_.find(field);
if (itr == weakEqns_.end()) return nullptr;
return (weakEqns_.find(field))->second;
}
/** requires ics */
bool is_dynamic(FieldName field) const
bool is_dynamic(FieldName field) const
{
return (weak_equation(field)->type() == WeakEquation::DYNAMIC_PDE);
}
/** query null weak equations per material */
bool null(FieldName field, int matID) const
{
{
return null_(field,matID);
}
@ -126,7 +126,7 @@ namespace ATC
std::map<std::string, double> parameterValues_;
/** material models */
std::vector<Material *> materials_;
std::vector<Material *> materials_;
std::map<std::string,int> materialNameToIndexMap_;// maps tag to index
/** weak equations */
@ -149,7 +149,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelThermal : public PhysicsModel
{
public:
public:
PhysicsModelThermal(std::string filename);
};
//-------------------------------------------------------------------
@ -157,7 +157,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelElastic : public PhysicsModel
{
public:
public:
PhysicsModelElastic(std::string filename);
};
//-------------------------------------------------------------------
@ -165,16 +165,16 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelThermoElastic : public PhysicsModel
{
public:
public:
PhysicsModelThermoElastic(std::string filename);
};
//-------------------------------------------------------------------
// @class PhysicsModelShear
//-------------------------------------------------------------------
class PhysicsModelShear : public PhysicsModel
{
public:
public:
PhysicsModelShear(std::string filename);
};
//-------------------------------------------------------------------
@ -182,7 +182,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelThermoShear : public PhysicsModel
{
public:
public:
PhysicsModelThermoShear(std::string filename);
};
//-------------------------------------------------------------------
@ -190,7 +190,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelSpecies : public PhysicsModel
{
public:
public:
PhysicsModelSpecies(std::string filename);
};
//-------------------------------------------------------------------
@ -198,7 +198,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelTwoTemperature : public PhysicsModel
{
public:
public:
PhysicsModelTwoTemperature(std::string filename);
};
//-------------------------------------------------------------------
@ -206,7 +206,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusion : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusion(std::string filename);
};
//-------------------------------------------------------------------
@ -214,7 +214,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionEquilibrium : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionEquilibrium(std::string filename);
};
//-------------------------------------------------------------------
@ -222,7 +222,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionSchrodinger : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionSchrodinger(std::string filename);
};
//-------------------------------------------------------------------
@ -230,7 +230,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionConvection : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionConvection(std::string filename);
};
//-------------------------------------------------------------------
@ -238,7 +238,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionConvectionEquilibrium : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionConvectionEquilibrium(std::string filename);
};
//-------------------------------------------------------------------
@ -246,7 +246,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionConvectionSchrodinger : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionConvectionSchrodinger(std::string filename);
};
//-------------------------------------------------------------------
@ -254,7 +254,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelDriftDiffusionSchrodingerSlice : public PhysicsModel
{
public:
public:
PhysicsModelDriftDiffusionSchrodingerSlice(std::string filename);
};
//-------------------------------------------------------------------
@ -262,7 +262,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelElectrostatic : public PhysicsModel
{
public:
public:
PhysicsModelElectrostatic(std::string filename);
};
//-------------------------------------------------------------------
@ -270,7 +270,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelElectrostaticEquilibrium : public PhysicsModel
{
public:
public:
PhysicsModelElectrostaticEquilibrium(std::string filename);
};
//-------------------------------------------------------------------
@ -278,7 +278,7 @@ namespace ATC
//-------------------------------------------------------------------
class PhysicsModelSpeciesElectrostatic : public PhysicsModel
{
public:
public:
PhysicsModelSpeciesElectrostatic(std::string filename);
};
//-------------------------------------------------------------------
@ -314,7 +314,7 @@ namespace ATC
FIELDS & fields_;
FieldName fieldName_;
int dof_;
SPAR_MAT stiffness_;
SPAR_MAT stiffness_;
};
}