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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13261 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2015-03-18 23:42:42 +00:00
parent fe59993ac8
commit 996a18cb83
16 changed files with 35 additions and 14 deletions
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14
doc/Section_commands.html
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@ -544,8 +544,8 @@ letters in parenthesis: c = USER-CUDA, g = GPU, i = USER-INTEL, k =
KOKKOS, o = USER-OMP, t = OPT. KOKKOS, o = USER-OMP, t = OPT.
</P> </P>
<DIV ALIGN=center><TABLE BORDER=1 > <DIV ALIGN=center><TABLE BORDER=1 >
<TR ALIGN="center"><TD ><A HREF = "bond_none.html">none</A></TD><TD ><A HREF = "bond_hybrid.html">hybrid</A></TD><TD ><A HREF = "bond_class2.html">class2 (o)</A></TD><TD ><A HREF = "bond_fene.html">fene (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "bond_none.html">none</A></TD><TD ><A HREF = "bond_hybrid.html">hybrid</A></TD><TD ><A HREF = "bond_class2.html">class2 (o)</A></TD><TD ><A HREF = "bond_fene.html">fene (ko)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "bond_fene_expand.html">fene/expand (o)</A></TD><TD ><A HREF = "bond_harmonic.html">harmonic (o)</A></TD><TD ><A HREF = "bond_morse.html">morse (o)</A></TD><TD ><A HREF = "bond_nonlinear.html">nonlinear (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "bond_fene_expand.html">fene/expand (o)</A></TD><TD ><A HREF = "bond_harmonic.html">harmonic (ko)</A></TD><TD ><A HREF = "bond_morse.html">morse (o)</A></TD><TD ><A HREF = "bond_nonlinear.html">nonlinear (o)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "bond_quartic.html">quartic (o)</A></TD><TD ><A HREF = "bond_table.html">table (o)</A> <TR ALIGN="center"><TD ><A HREF = "bond_quartic.html">quartic (o)</A></TD><TD ><A HREF = "bond_table.html">table (o)</A>
</TD></TR></TABLE></DIV> </TD></TR></TABLE></DIV>
@ -570,9 +570,9 @@ letters in parenthesis: c = USER-CUDA, g = GPU, i = USER-INTEL, k =
KOKKOS, o = USER-OMP, t = OPT. KOKKOS, o = USER-OMP, t = OPT.
</P> </P>
<DIV ALIGN=center><TABLE BORDER=1 > <DIV ALIGN=center><TABLE BORDER=1 >
<TR ALIGN="center"><TD ><A HREF = "angle_none.html">none</A></TD><TD ><A HREF = "angle_hybrid.html">hybrid</A></TD><TD ><A HREF = "angle_charmm.html">charmm (o)</A></TD><TD ><A HREF = "angle_class2.html">class2 (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "angle_none.html">none</A></TD><TD ><A HREF = "angle_hybrid.html">hybrid</A></TD><TD ><A HREF = "angle_charmm.html">charmm (ko)</A></TD><TD ><A HREF = "angle_class2.html">class2 (o)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "angle_cosine.html">cosine (o)</A></TD><TD ><A HREF = "angle_cosine_delta.html">cosine/delta (o)</A></TD><TD ><A HREF = "angle_cosine_periodic.html">cosine/periodic (o)</A></TD><TD ><A HREF = "angle_cosine_squared.html">cosine/squared (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "angle_cosine.html">cosine (o)</A></TD><TD ><A HREF = "angle_cosine_delta.html">cosine/delta (o)</A></TD><TD ><A HREF = "angle_cosine_periodic.html">cosine/periodic (o)</A></TD><TD ><A HREF = "angle_cosine_squared.html">cosine/squared (o)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "angle_harmonic.html">harmonic (o)</A></TD><TD ><A HREF = "angle_table.html">table (o)</A> <TR ALIGN="center"><TD ><A HREF = "angle_harmonic.html">harmonic (ko)</A></TD><TD ><A HREF = "angle_table.html">table (o)</A>
</TD></TR></TABLE></DIV> </TD></TR></TABLE></DIV>
<P>These are additional angle styles in USER packages, which can be used <P>These are additional angle styles in USER packages, which can be used
@ -597,8 +597,8 @@ letters in parenthesis: c = USER-CUDA, g = GPU, i = USER-INTEL, k =
KOKKOS, o = USER-OMP, t = OPT. KOKKOS, o = USER-OMP, t = OPT.
</P> </P>
<DIV ALIGN=center><TABLE BORDER=1 > <DIV ALIGN=center><TABLE BORDER=1 >
<TR ALIGN="center"><TD ><A HREF = "dihedral_none.html">none</A></TD><TD ><A HREF = "dihedral_hybrid.html">hybrid</A></TD><TD ><A HREF = "dihedral_charmm.html">charmm (o)</A></TD><TD ><A HREF = "dihedral_class2.html">class2 (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "dihedral_none.html">none</A></TD><TD ><A HREF = "dihedral_hybrid.html">hybrid</A></TD><TD ><A HREF = "dihedral_charmm.html">charmm (ko)</A></TD><TD ><A HREF = "dihedral_class2.html">class2 (o)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "dihedral_harmonic.html">harmonic (o)</A></TD><TD ><A HREF = "dihedral_helix.html">helix (o)</A></TD><TD ><A HREF = "dihedral_multi_harmonic.html">multi/harmonic (o)</A></TD><TD ><A HREF = "dihedral_opls.html">opls (o)</A> <TR ALIGN="center"><TD ><A HREF = "dihedral_harmonic.html">harmonic (o)</A></TD><TD ><A HREF = "dihedral_helix.html">helix (o)</A></TD><TD ><A HREF = "dihedral_multi_harmonic.html">multi/harmonic (o)</A></TD><TD ><A HREF = "dihedral_opls.html">opls (ko)</A>
</TD></TR></TABLE></DIV> </TD></TR></TABLE></DIV>
<P>These are additional dihedral styles in USER packages, which can be <P>These are additional dihedral styles in USER packages, which can be
@ -624,7 +624,7 @@ KOKKOS, o = USER-OMP, t = OPT.
</P> </P>
<DIV ALIGN=center><TABLE BORDER=1 > <DIV ALIGN=center><TABLE BORDER=1 >
<TR ALIGN="center"><TD ><A HREF = "improper_none.html">none</A></TD><TD ><A HREF = "improper_hybrid.html">hybrid</A></TD><TD ><A HREF = "improper_class2.html">class2 (o)</A></TD><TD ><A HREF = "improper_cvff.html">cvff (o)</A></TD></TR> <TR ALIGN="center"><TD ><A HREF = "improper_none.html">none</A></TD><TD ><A HREF = "improper_hybrid.html">hybrid</A></TD><TD ><A HREF = "improper_class2.html">class2 (o)</A></TD><TD ><A HREF = "improper_cvff.html">cvff (o)</A></TD></TR>
<TR ALIGN="center"><TD ><A HREF = "improper_harmonic.html">harmonic (o)</A></TD><TD ><A HREF = "improper_umbrella.html">umbrella (o)</A> <TR ALIGN="center"><TD ><A HREF = "improper_harmonic.html">harmonic (ko)</A></TD><TD ><A HREF = "improper_umbrella.html">umbrella (o)</A>
</TD></TR></TABLE></DIV> </TD></TR></TABLE></DIV>
<P>These are additional improper styles in USER packages, which can be <P>These are additional improper styles in USER packages, which can be

14
doc/Section_commands.txt
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@ -890,9 +890,9 @@ KOKKOS, o = USER-OMP, t = OPT.
"none"_bond_none.html, "none"_bond_none.html,
"hybrid"_bond_hybrid.html, "hybrid"_bond_hybrid.html,
"class2 (o)"_bond_class2.html, "class2 (o)"_bond_class2.html,
"fene (o)"_bond_fene.html, "fene (ko)"_bond_fene.html,
"fene/expand (o)"_bond_fene_expand.html, "fene/expand (o)"_bond_fene_expand.html,
"harmonic (o)"_bond_harmonic.html, "harmonic (ko)"_bond_harmonic.html,
"morse (o)"_bond_morse.html, "morse (o)"_bond_morse.html,
"nonlinear (o)"_bond_nonlinear.html, "nonlinear (o)"_bond_nonlinear.html,
"quartic (o)"_bond_quartic.html, "quartic (o)"_bond_quartic.html,
@ -919,13 +919,13 @@ KOKKOS, o = USER-OMP, t = OPT.
"none"_angle_none.html, "none"_angle_none.html,
"hybrid"_angle_hybrid.html, "hybrid"_angle_hybrid.html,
"charmm (o)"_angle_charmm.html, "charmm (ko)"_angle_charmm.html,
"class2 (o)"_angle_class2.html, "class2 (o)"_angle_class2.html,
"cosine (o)"_angle_cosine.html, "cosine (o)"_angle_cosine.html,
"cosine/delta (o)"_angle_cosine_delta.html, "cosine/delta (o)"_angle_cosine_delta.html,
"cosine/periodic (o)"_angle_cosine_periodic.html, "cosine/periodic (o)"_angle_cosine_periodic.html,
"cosine/squared (o)"_angle_cosine_squared.html, "cosine/squared (o)"_angle_cosine_squared.html,
"harmonic (o)"_angle_harmonic.html, "harmonic (ko)"_angle_harmonic.html,
"table (o)"_angle_table.html :tb(c=4,ea=c) "table (o)"_angle_table.html :tb(c=4,ea=c)
These are additional angle styles in USER packages, which can be used These are additional angle styles in USER packages, which can be used
@ -954,12 +954,12 @@ KOKKOS, o = USER-OMP, t = OPT.
"none"_dihedral_none.html, "none"_dihedral_none.html,
"hybrid"_dihedral_hybrid.html, "hybrid"_dihedral_hybrid.html,
"charmm (o)"_dihedral_charmm.html, "charmm (ko)"_dihedral_charmm.html,
"class2 (o)"_dihedral_class2.html, "class2 (o)"_dihedral_class2.html,
"harmonic (o)"_dihedral_harmonic.html, "harmonic (o)"_dihedral_harmonic.html,
"helix (o)"_dihedral_helix.html, "helix (o)"_dihedral_helix.html,
"multi/harmonic (o)"_dihedral_multi_harmonic.html, "multi/harmonic (o)"_dihedral_multi_harmonic.html,
"opls (o)"_dihedral_opls.html :tb(c=4,ea=c) "opls (ko)"_dihedral_opls.html :tb(c=4,ea=c)
These are additional dihedral styles in USER packages, which can be These are additional dihedral styles in USER packages, which can be
used if "LAMMPS is built with the appropriate used if "LAMMPS is built with the appropriate
@ -987,7 +987,7 @@ KOKKOS, o = USER-OMP, t = OPT.
"hybrid"_improper_hybrid.html, "hybrid"_improper_hybrid.html,
"class2 (o)"_improper_class2.html, "class2 (o)"_improper_class2.html,
"cvff (o)"_improper_cvff.html, "cvff (o)"_improper_cvff.html,
"harmonic (o)"_improper_harmonic.html, "harmonic (ko)"_improper_harmonic.html,
"umbrella (o)"_improper_umbrella.html :tb(c=4,ea=c) "umbrella (o)"_improper_umbrella.html :tb(c=4,ea=c)
These are additional improper styles in USER packages, which can be These are additional improper styles in USER packages, which can be

2
doc/angle_charmm.html
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@ -11,6 +11,8 @@
<H3>angle_style charmm command <H3>angle_style charmm command
</H3> </H3>
<H3>angle_style charmm/kk command
</H3>
<H3>angle_style charmm/omp command <H3>angle_style charmm/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/angle_charmm.txt
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@ -7,6 +7,7 @@
:line :line
angle_style charmm command :h3 angle_style charmm command :h3
angle_style charmm/kk command :h3
angle_style charmm/omp command :h3 angle_style charmm/omp command :h3
[Syntax:] [Syntax:]

2
doc/angle_harmonic.html
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@ -11,6 +11,8 @@
<H3>angle_style harmonic command <H3>angle_style harmonic command
</H3> </H3>
<H3>angle_style harmonic/kk command
</H3>
<H3>angle_style harmonic/omp command <H3>angle_style harmonic/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/angle_harmonic.txt
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@ -7,6 +7,7 @@
:line :line
angle_style harmonic command :h3 angle_style harmonic command :h3
angle_style harmonic/kk command :h3
angle_style harmonic/omp command :h3 angle_style harmonic/omp command :h3
[Syntax:] [Syntax:]

2
doc/bond_fene.html
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@ -11,6 +11,8 @@
<H3>bond_style fene command <H3>bond_style fene command
</H3> </H3>
<H3>bond_style fene/kk command
</H3>
<H3>bond_style fene/omp command <H3>bond_style fene/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/bond_fene.txt
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@ -7,6 +7,7 @@
:line :line
bond_style fene command :h3 bond_style fene command :h3
bond_style fene/kk command :h3
bond_style fene/omp command :h3 bond_style fene/omp command :h3
[Syntax:] [Syntax:]

2
doc/bond_harmonic.html
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@ -11,6 +11,8 @@
<H3>bond_style harmonic command <H3>bond_style harmonic command
</H3> </H3>
<H3>bond_style harmonic/kk command
</H3>
<H3>bond_style harmonic/omp command <H3>bond_style harmonic/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/bond_harmonic.txt
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@ -7,6 +7,7 @@
:line :line
bond_style harmonic command :h3 bond_style harmonic command :h3
bond_style harmonic/kk command :h3
bond_style harmonic/omp command :h3 bond_style harmonic/omp command :h3
[Syntax:] [Syntax:]

2
doc/dihedral_charmm.html
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@ -11,6 +11,8 @@
<H3>dihedral_style charmm command <H3>dihedral_style charmm command
</H3> </H3>
<H3>dihedral_style charmm/kk command
</H3>
<H3>dihedral_style charmm/omp command <H3>dihedral_style charmm/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/dihedral_charmm.txt
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@ -7,6 +7,7 @@
:line :line
dihedral_style charmm command :h3 dihedral_style charmm command :h3
dihedral_style charmm/kk command :h3
dihedral_style charmm/omp command :h3 dihedral_style charmm/omp command :h3
[Syntax:] [Syntax:]

2
doc/dihedral_opls.html
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@ -11,6 +11,8 @@
<H3>dihedral_style opls command <H3>dihedral_style opls command
</H3> </H3>
<H3>dihedral_style opls/kk command
</H3>
<H3>dihedral_style opls/omp command <H3>dihedral_style opls/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/dihedral_opls.txt
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@ -7,6 +7,7 @@
:line :line
dihedral_style opls command :h3 dihedral_style opls command :h3
dihedral_style opls/kk command :h3
dihedral_style opls/omp command :h3 dihedral_style opls/omp command :h3
[Syntax:] [Syntax:]

2
doc/improper_harmonic.html
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@ -11,6 +11,8 @@
<H3>improper_style harmonic command <H3>improper_style harmonic command
</H3> </H3>
<H3>improper_style harmonic/kk command
</H3>
<H3>improper_style harmonic/omp command <H3>improper_style harmonic/omp command
</H3> </H3>
<P><B>Syntax:</B> <P><B>Syntax:</B>

1
doc/improper_harmonic.txt
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@ -7,6 +7,7 @@
:line :line
improper_style harmonic command :h3 improper_style harmonic command :h3
improper_style harmonic/kk command :h3
improper_style harmonic/omp command :h3 improper_style harmonic/omp command :h3
[Syntax:] [Syntax:]