git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14582 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
@ -84,4 +84,8 @@ E: Bias compute group does not match compute group
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The specified compute must operate on the same group as the parent
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The specified compute must operate on the same group as the parent
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compute.
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compute.
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E: Temperature compute degrees of freedom < 0
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UNDOCUMENTED
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*/
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*/
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@ -79,4 +79,8 @@ E: Pair line/lj requires atom style line
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Self-explanatory.
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Self-explanatory.
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E: All pair coeffs are not set
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UNDOCUMENTED
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*/
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*/
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@ -59,11 +59,6 @@ E: Invalid body nparticle command
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Arguments in atom-style command are not correct.
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Arguments in atom-style command are not correct.
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E: Invalid format in Bodies section of data file
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The specified number of integer or floating point values does not
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appear.
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E: Incorrect # of integer values in Bodies section of data file
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E: Incorrect # of integer values in Bodies section of data file
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See doc page for body style.
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See doc page for body style.
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@ -80,4 +75,9 @@ E: Insufficient Jacobi rotations for body nparticle
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Eigensolve for rigid body was not sufficiently accurate.
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Eigensolve for rigid body was not sufficiently accurate.
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U: Invalid format in Bodies section of data file
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The specified number of integer or floating point values does not
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appear.
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*/
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*/
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@ -50,4 +50,8 @@ E: Dump atom/gz only writes compressed files
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The dump atom/gz output file name must have a .gz suffix.
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The dump atom/gz output file name must have a .gz suffix.
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E: Cannot open dump file
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UNDOCUMENTED
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*/
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*/
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@ -50,4 +50,8 @@ E: Dump cfg/gz only writes compressed files
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The dump cfg/gz output file name must have a .gz suffix.
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The dump cfg/gz output file name must have a .gz suffix.
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E: Cannot open dump file
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UNDOCUMENTED
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*/
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*/
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@ -50,4 +50,8 @@ E: Dump custom/gz only writes compressed files
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The dump custom/gz output file name must have a .gz suffix.
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The dump custom/gz output file name must have a .gz suffix.
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E: Cannot open dump file
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UNDOCUMENTED
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*/
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*/
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@ -50,4 +50,8 @@ E: Dump xyz/gz only writes compressed files
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The dump xyz/gz output file name must have a .gz suffix.
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The dump xyz/gz output file name must have a .gz suffix.
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E: Cannot open dump file
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UNDOCUMENTED
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*/
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*/
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@ -101,4 +101,8 @@ E: Core/shell partners were not all found
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Could not find or more atoms in the bond pairs.
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Could not find or more atoms in the bond pairs.
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E: Temperature compute degrees of freedom < 0
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UNDOCUMENTED
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*/
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*/
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@ -56,6 +56,14 @@ public:
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: Insufficient memory on accelerator
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UNDOCUMENTED
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E: Cannot use newton pair with eam/alloy/gpu pair style
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UNDOCUMENTED
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E: Incorrect args for pair coefficients
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E: Incorrect args for pair coefficients
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Self-explanatory. Check the input script or data file.
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Self-explanatory. Check the input script or data file.
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@ -56,6 +56,14 @@ public:
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: Insufficient memory on accelerator
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UNDOCUMENTED
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E: Cannot use newton pair with eam/fs/gpu pair style
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UNDOCUMENTED
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E: Incorrect args for pair coefficients
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E: Incorrect args for pair coefficients
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Self-explanatory. Check the input script or data file.
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Self-explanatory. Check the input script or data file.
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@ -51,7 +51,11 @@ E: Insufficient memory on accelerator
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There is insufficient memory on one of the devices specified for the gpu
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There is insufficient memory on one of the devices specified for the gpu
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package
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package
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E: Cannot use newton pair with lj/cut/gpu pair style
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E: Cannot use newton pair with lj/cubic/gpu pair style
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UNDOCUMENTED
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U: Cannot use newton pair with lj/cut/gpu pair style
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Self-explanatory.
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Self-explanatory.
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@ -54,6 +54,10 @@ E: Insufficient memory on accelerator
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There is insufficient memory on one of the devices specified for the gpu
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There is insufficient memory on one of the devices specified for the gpu
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package
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package
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E: Pair style tersoff/gpu requires atom IDs
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UNDOCUMENTED
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E: Pair style tersoff/gpu requires newton pair off
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E: Pair style tersoff/gpu requires newton pair off
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See the newton command. This is a restriction to use this pair style.
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See the newton command. This is a restriction to use this pair style.
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@ -64,4 +68,3 @@ All pair coefficients must be set in the data file or by the
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pair_coeff command before running a simulation.
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pair_coeff command before running a simulation.
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*/
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*/
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@ -51,7 +51,11 @@ E: Insufficient memory on accelerator
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There is insufficient memory on one of the devices specified for the gpu
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There is insufficient memory on one of the devices specified for the gpu
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package
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package
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E: Cannot use newton pair with gauss/gpu pair style
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E: Cannot use newton pair with zbl/gpu pair style
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UNDOCUMENTED
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U: Cannot use newton pair with gauss/gpu pair style
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Self-explanatory.
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Self-explanatory.
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@ -83,9 +83,9 @@ E: Incorrect args for pair coefficients
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Self-explanatory. Check the input script or data file.
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Self-explanatory. Check the input script or data file.
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E: Pair granular requires atom style sphere
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E: Pair granular requires atom atrributes radius, rmass
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Self-explanatory.
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UNDOCUMENTED
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E: Pair granular requires ghost atoms store velocity
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E: Pair granular requires ghost atoms store velocity
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@ -96,4 +96,12 @@ E: Pair granular with shear history requires newton pair off
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This is a current restriction of the implementation of pair
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This is a current restriction of the implementation of pair
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granular styles with history.
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granular styles with history.
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E: Could not find pair fix ID
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UNDOCUMENTED
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U: Pair granular requires atom style sphere
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Self-explanatory.
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*/
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*/
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@ -110,4 +110,8 @@ class SortFunctor {
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: KOKKOS package requires a kokkos enabled atom_style
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UNDOCUMENTED
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*/
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*/
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@ -98,7 +98,11 @@ class ComputeTempKokkos : public ComputeTemp {
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: Illegal ... command
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E: Temperature compute degrees of freedom < 0
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UNDOCUMENTED
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U: Illegal ... command
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Self-explanatory. Check the input script syntax and compare to the
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Self-explanatory. Check the input script syntax and compare to the
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documentation for the command. You can use -echo screen as a
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documentation for the command. You can use -echo screen as a
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@ -63,4 +63,8 @@ class DomainKokkos : public Domain {
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: Illegal simulation box
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UNDOCUMENTED
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*/
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*/
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@ -44,58 +44,62 @@ class FixDeformKokkos : public FixDeform {
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/* ERROR/WARNING messages:
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/* ERROR/WARNING messages:
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E: Illegal ... command
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E: Cannot (yet) use rigid bodies with fix deform and Kokkos
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UNDOCUMENTED
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U: Illegal ... command
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Self-explanatory. Check the input script syntax and compare to the
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Self-explanatory. Check the input script syntax and compare to the
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documentation for the command. You can use -echo screen as a
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documentation for the command. You can use -echo screen as a
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command-line option when running LAMMPS to see the offending line.
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command-line option when running LAMMPS to see the offending line.
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E: Fix deform tilt factors require triclinic box
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U: Fix deform tilt factors require triclinic box
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Cannot deform the tilt factors of a simulation box unless it
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Cannot deform the tilt factors of a simulation box unless it
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is a triclinic (non-orthogonal) box.
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is a triclinic (non-orthogonal) box.
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E: Cannot use fix deform on a shrink-wrapped boundary
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U: Cannot use fix deform on a shrink-wrapped boundary
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The x, y, z options cannot be applied to shrink-wrapped
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The x, y, z options cannot be applied to shrink-wrapped
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dimensions.
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dimensions.
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E: Cannot use fix deform tilt on a shrink-wrapped 2nd dim
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U: Cannot use fix deform tilt on a shrink-wrapped 2nd dim
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This is because the shrink-wrapping will change the value
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This is because the shrink-wrapping will change the value
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of the strain implied by the tilt factor.
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of the strain implied by the tilt factor.
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E: Fix deform volume setting is invalid
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U: Fix deform volume setting is invalid
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Cannot use volume style unless other dimensions are being controlled.
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Cannot use volume style unless other dimensions are being controlled.
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E: More than one fix deform
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U: More than one fix deform
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Only one fix deform can be defined at a time.
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Only one fix deform can be defined at a time.
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E: Variable name for fix deform does not exist
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U: Variable name for fix deform does not exist
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Self-explantory.
|
Self-explantory.
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E: Variable for fix deform is invalid style
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U: Variable for fix deform is invalid style
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The variable must be an equal-style variable.
|
The variable must be an equal-style variable.
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E: Final box dimension due to fix deform is < 0.0
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U: Final box dimension due to fix deform is < 0.0
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Self-explanatory.
|
Self-explanatory.
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||||||
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E: Cannot use fix deform trate on a box with zero tilt
|
U: Cannot use fix deform trate on a box with zero tilt
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The trate style alters the current strain.
|
The trate style alters the current strain.
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E: Fix deform cannot use yz variable with xy
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U: Fix deform cannot use yz variable with xy
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||||||
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The yz setting cannot be a variable if xy deformation is also
|
The yz setting cannot be a variable if xy deformation is also
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specified. This is because LAMMPS cannot determine if the yz setting
|
specified. This is because LAMMPS cannot determine if the yz setting
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will induce a box flip which would be invalid if xy is also changing.
|
will induce a box flip which would be invalid if xy is also changing.
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||||||
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|
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E: Fix deform is changing yz too much with xy
|
U: Fix deform is changing yz too much with xy
|
||||||
|
|
||||||
When both yz and xy are changing, it induces changes in xz if the
|
When both yz and xy are changing, it induces changes in xz if the
|
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box must flip from one tilt extreme to another. Thus it is not
|
box must flip from one tilt extreme to another. Thus it is not
|
||||||
|
|||||||
@ -83,4 +83,12 @@ class FixNHKokkos : public FixNH {
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|
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/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot (yet) use rigid bodies with fix nh and Kokkos
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Fix npt/nph has tilted box too far in one step - periodic cell is too far from equilibrium state
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -40,4 +40,12 @@ class FixNPHKokkos : public FixNHKokkos<DeviceType> {
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|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Temperature control can not be used with fix nph
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pressure control must be used with fix nph
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -40,4 +40,12 @@ class FixNPTKokkos : public FixNHKokkos<DeviceType> {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Temperature control must be used with fix npt
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pressure control must be used with fix npt
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -41,4 +41,12 @@ class FixNVTKokkos : public FixNHKokkos<DeviceType> {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Temperature control must be used with fix nvt
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pressure control can not be used with fix nvt
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -47,6 +47,14 @@ E: Invalid Kokkos command-line args
|
|||||||
|
|
||||||
Self-explanatory. See Section 2.7 of the manual for details.
|
Self-explanatory. See Section 2.7 of the manual for details.
|
||||||
|
|
||||||
|
E: GPUs are requested but Kokkos has not been compiled for CUDA
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Kokkos has been compiled for CUDA but no GPUs are requested
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Illegal ... command
|
E: Illegal ... command
|
||||||
|
|
||||||
Self-explanatory. Check the input script syntax and compare to the
|
Self-explanatory. Check the input script syntax and compare to the
|
||||||
|
|||||||
@ -433,14 +433,14 @@ class NeighborKokkos : public Neighbor {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot (yet) request ghost atoms with Kokkos half neighbor list
|
||||||
|
|
||||||
|
This feature is not yet supported.
|
||||||
|
|
||||||
E: Too many local+ghost atoms for neighbor list
|
E: Too many local+ghost atoms for neighbor list
|
||||||
|
|
||||||
The number of nlocal + nghost atoms on a processor
|
The number of nlocal + nghost atoms on a processor
|
||||||
is limited by the size of a 32-bit integer with 2 bits
|
is limited by the size of a 32-bit integer with 2 bits
|
||||||
removed for masking 1-2, 1-3, 1-4 neighbors.
|
removed for masking 1-2, 1-3, 1-4 neighbors.
|
||||||
|
|
||||||
E: Cannot (yet) request ghost atoms with Kokkos half neighbor list
|
|
||||||
|
|
||||||
This feature is not yet supported.
|
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -131,4 +131,16 @@ class PairBuckCoulCutKokkos : public PairBuckCoulCut {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with buck/coul/cut/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -147,4 +147,16 @@ class PairBuckCoulLongKokkos : public PairBuckCoulLong {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with buck/coul/long/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -132,4 +132,16 @@ class PairCoulDebyeKokkos : public PairCoulDebye {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with coul/debye/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -151,4 +151,16 @@ class PairCoulLongKokkos : public PairCoulLong {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with buck/coul/long/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -180,4 +180,20 @@ E: Cannot use chosen neighbor list style with pair eam/kk/alloy
|
|||||||
|
|
||||||
That style is not supported by Kokkos.
|
That style is not supported by Kokkos.
|
||||||
|
|
||||||
|
E: Incorrect args for pair coefficients
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: No matching element in EAM potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot open EAM potential file %s
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Incorrect element names in EAM potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -180,4 +180,20 @@ E: Cannot use chosen neighbor list style with pair eam/kk/fs
|
|||||||
|
|
||||||
That style is not supported by Kokkos.
|
That style is not supported by Kokkos.
|
||||||
|
|
||||||
|
E: Incorrect args for pair coefficients
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: No matching element in EAM potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot open EAM potential file %s
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Incorrect element names in EAM potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -148,4 +148,16 @@ class PairLJCharmmCoulCharmmImplicitKokkos : public PairLJCharmmCoulCharmmImplic
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/charmm/coul/charmm/implicit/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -148,4 +148,16 @@ class PairLJCharmmCoulCharmmKokkos : public PairLJCharmmCoulCharmm {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/charmm/coul/charmm/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -147,4 +147,12 @@ class PairLJCharmmCoulLongKokkos : public PairLJCharmmCoulLong {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/charmm/coul/long/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -127,4 +127,16 @@ class PairLJClass2CoulCutKokkos : public PairLJClass2CoulCut {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/class2/coul/cut/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -144,4 +144,16 @@ class PairLJClass2CoulLongKokkos : public PairLJClass2CoulLong {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/class2/coul/long/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -121,4 +121,16 @@ class PairLJClass2Kokkos : public PairLJClass2 {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/class2/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -128,4 +128,16 @@ class PairLJCutCoulDebyeKokkos : public PairLJCutCoulDebye {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/cut/coul/debye/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -127,4 +127,12 @@ class PairLJCutCoulDSFKokkos : public PairLJCutCoulDSF {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/cut/coul/cut/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -122,4 +122,16 @@ class PairLJExpandKokkos : public PairLJExpand {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/expand/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -148,4 +148,16 @@ class PairLJGromacsCoulGromacsKokkos : public PairLJGromacsCoulGromacs {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/gromacs/coul/gromacs/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -150,4 +150,16 @@ class PairLJGromacsKokkos : public PairLJGromacs {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use Kokkos pair style with rRESPA inner/middle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with lj/gromacs/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -147,4 +147,8 @@ class PairSWKokkos : public PairSW {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with pair sw/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -217,4 +217,8 @@ class PairTersoffKokkos : public PairTersoff {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with tersoff/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -217,4 +217,8 @@ class PairTersoffMODKokkos : public PairTersoffMOD {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with tersoff/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -228,4 +228,12 @@ class PairTersoffZBLKokkos : public PairTersoffZBL {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Pair tersoff/zbl/kk requires metal or real units
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use chosen neighbor list style with tersoff/zbl/kk
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -143,8 +143,8 @@ solver/pair style.
|
|||||||
|
|
||||||
W: System is not charge neutral, net charge = %g
|
W: System is not charge neutral, net charge = %g
|
||||||
|
|
||||||
The total charge on all atoms on the system is not 0.0, which
|
The total charge on all atoms on the system is not 0.0.
|
||||||
is not valid for the long-range Coulombic solvers.
|
For some KSpace solvers this is only a warning.
|
||||||
|
|
||||||
W: Ewald/disp Newton solver failed, using old method to estimate g_ewald
|
W: Ewald/disp Newton solver failed, using old method to estimate g_ewald
|
||||||
|
|
||||||
|
|||||||
@ -282,4 +282,8 @@ E: Cannot open BOP potential file %s
|
|||||||
The specified BOP potential file cannot be opened. Check that the
|
The specified BOP potential file cannot be opened. Check that the
|
||||||
path and name are correct.
|
path and name are correct.
|
||||||
|
|
||||||
|
E: Incorrect table format check for element types
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -317,3 +317,43 @@ class PairPolymorphic : public Pair {
|
|||||||
|
|
||||||
#endif
|
#endif
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Incorrect args for pair coefficients
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pair style polymorphic requires atom IDs
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pair style polymorphic requires newton pair on
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: All pair coeffs are not set
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot open polymorphic potential file %s
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Incorrect number of elements in potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Element not defined in potential file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Test potential tables
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
*/
|
||||||
|
|||||||
@ -110,12 +110,10 @@ invalid.
|
|||||||
|
|
||||||
E: Potential file has duplicate entry
|
E: Potential file has duplicate entry
|
||||||
|
|
||||||
The potential file for a Vashishta or Tersoff potential has more than
|
The potential file has more than one entry for the same element.
|
||||||
one entry for the same 3 ordered elements.
|
|
||||||
|
|
||||||
E: Potential file is missing an entry
|
E: Potential file is missing an entry
|
||||||
|
|
||||||
The potential file for a Vashishta or Tersoff potential does not have a
|
The potential file does not have a needed entry.
|
||||||
needed entry.
|
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -133,6 +133,10 @@ E: At least one atom of each swapped type must be present to define charges.
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: All atoms of a swapped type must have same charge.
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot do atom/swap on atoms in atom_modify first group
|
E: Cannot do atom/swap on atoms in atom_modify first group
|
||||||
|
|
||||||
This is a restriction due to the way atoms are organized in a list to
|
This is a restriction due to the way atoms are organized in a list to
|
||||||
|
|||||||
@ -178,11 +178,19 @@ E: Atom type must be zero in fix gcmc mol command
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Fix gcmc molecule has charges, but atom style does not
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix gcmc molecule template ID must be same as atom_style template ID
|
E: Fix gcmc molecule template ID must be same as atom_style template ID
|
||||||
|
|
||||||
When using atom_style template, you cannot insert molecules that are
|
When using atom_style template, you cannot insert molecules that are
|
||||||
not in that template.
|
not in that template.
|
||||||
|
|
||||||
|
E: Fix gcmc atom has charge, but atom style does not
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot use fix gcmc shake and not molecule
|
E: Cannot use fix gcmc shake and not molecule
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -257,10 +265,17 @@ E: Illegal fix gcmc gas mass <= 0
|
|||||||
The computed mass of the designated gas molecule or atom type was less
|
The computed mass of the designated gas molecule or atom type was less
|
||||||
than or equal to zero.
|
than or equal to zero.
|
||||||
|
|
||||||
E: Cannot do gcmc on atoms in atom_modify first group
|
E: Cannot do GCMC on atoms in atom_modify first group
|
||||||
|
|
||||||
This is a restriction due to the way atoms are organized in a list to
|
UNDOCUMENTED
|
||||||
enable the atom_modify first command.
|
|
||||||
|
E: Could not find specified fix gcmc group ID
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Fix gcmc put atom outside box
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix gcmc ran out of available molecule IDs
|
E: Fix gcmc ran out of available molecule IDs
|
||||||
|
|
||||||
@ -274,4 +289,9 @@ E: Too many total atoms
|
|||||||
|
|
||||||
See the setting for bigint in the src/lmptype.h file.
|
See the setting for bigint in the src/lmptype.h file.
|
||||||
|
|
||||||
|
U: Cannot do gcmc on atoms in atom_modify first group
|
||||||
|
|
||||||
|
This is a restriction due to the way atoms are organized in a list to
|
||||||
|
enable the atom_modify first command.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -153,6 +153,10 @@ E: Fix deposit and fix shake not using same molecule template ID
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
W: Fix deposit near setting < possible overlap separation %g
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: Particle deposition was unsuccessful
|
W: Particle deposition was unsuccessful
|
||||||
|
|
||||||
The fix deposit command was not able to insert as many atoms as
|
The fix deposit command was not able to insert as many atoms as
|
||||||
|
|||||||
@ -97,6 +97,10 @@ class PairREAX : public Pair {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
W: pair style reax is now deprecated and will soon be retired. Users should switch to pair_style reax/c
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
E: Reax_defs.h setting for NATDEF is too small
|
E: Reax_defs.h setting for NATDEF is too small
|
||||||
|
|
||||||
Edit the setting in the ReaxFF library and re-compile the
|
Edit the setting in the ReaxFF library and re-compile the
|
||||||
@ -143,8 +147,4 @@ E: Invalid REAX atom type
|
|||||||
There is a mis-match between LAMMPS atom types and the elements
|
There is a mis-match between LAMMPS atom types and the elements
|
||||||
listed in the ReaxFF force field file.
|
listed in the ReaxFF force field file.
|
||||||
|
|
||||||
W: pair style reax is now deprecated and will soon be retired. Users should switch to pair_style reax/c
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -256,10 +256,9 @@ NPT/NPH fix must be defined in input script after all rigid fixes,
|
|||||||
else the rigid fix contribution to the pressure virial is
|
else the rigid fix contribution to the pressure virial is
|
||||||
incorrect.
|
incorrect.
|
||||||
|
|
||||||
W: Cannot count rigid body degrees-of-freedom before bodies are fully initialized h
|
W: Cannot count rigid body degrees-of-freedom before bodies are fully initialized
|
||||||
|
|
||||||
This means the temperature associated with the rigid bodies may be
|
UNDOCUMENTED
|
||||||
incorrect on this timestep.
|
|
||||||
|
|
||||||
W: Computing temperature of portions of rigid bodies
|
W: Computing temperature of portions of rigid bodies
|
||||||
|
|
||||||
@ -272,6 +271,10 @@ E: Fix rigid/small atom has non-zero image flag in a non-periodic dimension
|
|||||||
|
|
||||||
Image flags for non-periodic dimensions should not be set.
|
Image flags for non-periodic dimensions should not be set.
|
||||||
|
|
||||||
|
E: One or more rigid bodies are a single particle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Inconsistent use of finite-size particles by molecule template molecules
|
E: Inconsistent use of finite-size particles by molecule template molecules
|
||||||
|
|
||||||
Not all of the molecules define a radius for their constituent
|
Not all of the molecules define a radius for their constituent
|
||||||
@ -317,4 +320,9 @@ cutoff command to insure ghost atoms are acquired from far enough away
|
|||||||
to encompass the max distance printed when the fix rigid/small command
|
to encompass the max distance printed when the fix rigid/small command
|
||||||
was invoked.
|
was invoked.
|
||||||
|
|
||||||
|
U: Cannot count rigid body degrees-of-freedom before bodies are fully initialized h
|
||||||
|
|
||||||
|
This means the temperature associated with the rigid bodies may be
|
||||||
|
incorrect on this timestep.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
48
src/atom.h
48
src/atom.h
@ -360,23 +360,29 @@ E: Atom_modify sort and first options cannot be used together
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Atom ID is negative
|
E: One or more Atom IDs is negative
|
||||||
|
|
||||||
Self-explanatory.
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Atom ID is too big
|
E: One or more atom IDs is too big
|
||||||
|
|
||||||
The limit on atom IDs is set by the SMALLBIG, BIGBIG, SMALLSMALL
|
UNDOCUMENTED
|
||||||
setting in your Makefile. See Section_start 2.2 of the manual for
|
|
||||||
more details.
|
|
||||||
|
|
||||||
E: Atom ID is zero
|
E: One or more atom IDs is zero
|
||||||
|
|
||||||
Either all atoms IDs must be zero or none of them.
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Not all atom IDs are 0
|
E: Non-zero atom IDs with atom_modify id = no
|
||||||
|
|
||||||
Either all atoms IDs must be zero or none of them.
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: All atom IDs = 0 but atom_modify id = yes
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Duplicate atom IDs exist
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: New atom IDs exceed maximum allowed ID
|
E: New atom IDs exceed maximum allowed ID
|
||||||
|
|
||||||
@ -387,6 +393,10 @@ E: Incorrect atom format in data file
|
|||||||
Number of values per atom line in the data file is not consistent with
|
Number of values per atom line in the data file is not consistent with
|
||||||
the atom style.
|
the atom style.
|
||||||
|
|
||||||
|
E: Invalid atom type in Atoms section of data file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Incorrect velocity format in data file
|
E: Incorrect velocity format in data file
|
||||||
|
|
||||||
Each atom style defines a format for the Velocity section
|
Each atom style defines a format for the Velocity section
|
||||||
@ -497,4 +507,22 @@ E: Too many atom sorting bins
|
|||||||
This is likely due to an immense simulation box that has blown up
|
This is likely due to an immense simulation box that has blown up
|
||||||
to a large size.
|
to a large size.
|
||||||
|
|
||||||
|
U: Atom ID is negative
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Atom ID is too big
|
||||||
|
|
||||||
|
The limit on atom IDs is set by the SMALLBIG, BIGBIG, SMALLSMALL
|
||||||
|
setting in your Makefile. See Section_start 2.2 of the manual for
|
||||||
|
more details.
|
||||||
|
|
||||||
|
U: Atom ID is zero
|
||||||
|
|
||||||
|
Either all atoms IDs must be zero or none of them.
|
||||||
|
|
||||||
|
U: Not all atom IDs are 0
|
||||||
|
|
||||||
|
Either all atoms IDs must be zero or none of them.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -149,4 +149,8 @@ E: Assigning body parameters to non-body atom
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Assigning quat to non-body atom
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
12
src/comm.h
12
src/comm.h
@ -163,10 +163,22 @@ E: Comm_modify group != atom_modify first group
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Use cutoff/multi flag to set cutoff in multi mode
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid cutoff in comm_modify command
|
E: Invalid cutoff in comm_modify command
|
||||||
|
|
||||||
Specified cutoff must be >= 0.0.
|
Specified cutoff must be >= 0.0.
|
||||||
|
|
||||||
|
E: Use cutoff flag to set cutoff in single mode
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set cutoff/multi before simulation box is defined
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Specified processors != physical processors
|
E: Specified processors != physical processors
|
||||||
|
|
||||||
The 3d grid of processors defined by the processors command does not
|
The 3d grid of processors defined by the processors command does not
|
||||||
|
|||||||
@ -153,9 +153,17 @@ E: Compute chunk/atom without bins cannot use discard mixed
|
|||||||
|
|
||||||
That discard option only applies to the binning styles.
|
That discard option only applies to the binning styles.
|
||||||
|
|
||||||
|
E: Compute chunk/atom sphere z origin must be 0.0 for 2d
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Compute chunk/atom cylinder axis must be z for 2d
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Compute ID for compute chunk /atom does not exist
|
E: Compute ID for compute chunk /atom does not exist
|
||||||
|
|
||||||
Self-explanatory.
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Compute chunk/atom compute does not calculate per-atom values
|
E: Compute chunk/atom compute does not calculate per-atom values
|
||||||
|
|
||||||
@ -205,6 +213,10 @@ E: Compute chunk/atom for triclinic boxes requires units reduced
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Compute ID for compute chunk/atom does not exist
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
E: Molecule IDs too large for compute chunk/atom
|
E: Molecule IDs too large for compute chunk/atom
|
||||||
|
|
||||||
The IDs must not be larger than can be stored in a 32-bit integer
|
The IDs must not be larger than can be stored in a 32-bit integer
|
||||||
@ -234,6 +246,14 @@ E: Invalid bin bounds in compute chunk/atom
|
|||||||
|
|
||||||
The lo/hi values are inconsistent.
|
The lo/hi values are inconsistent.
|
||||||
|
|
||||||
|
E: Compute chunk/atom bin/sphere radius is too large for periodic box
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Compute chunk/atom bin/cylinder radius is too large for periodic box
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot use compute chunk/atom bin z for 2d model
|
E: Cannot use compute chunk/atom bin z for 2d model
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|||||||
@ -64,6 +64,10 @@ E: Compute hexorder/atom requires a pair style be defined
|
|||||||
|
|
||||||
Self-explantory.
|
Self-explantory.
|
||||||
|
|
||||||
|
E: Compute hexorder/atom cutoff is longer than pairwise cutoff
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: More than one compute hexorder/atom
|
W: More than one compute hexorder/atom
|
||||||
|
|
||||||
It is not efficient to use compute hexorder/atom more than once.
|
It is not efficient to use compute hexorder/atom more than once.
|
||||||
|
|||||||
@ -76,6 +76,10 @@ E: Compute msd/chunk does not use chunk/atom compute
|
|||||||
|
|
||||||
The style of the specified compute is not chunk/atom.
|
The style of the specified compute is not chunk/atom.
|
||||||
|
|
||||||
|
E: Could not find compute msd/chunk fix ID
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Compute msd/chunk nchunk is not static
|
E: Compute msd/chunk nchunk is not static
|
||||||
|
|
||||||
This is required because the MSD cannot be computed consistently if
|
This is required because the MSD cannot be computed consistently if
|
||||||
|
|||||||
@ -73,6 +73,10 @@ E: Compute orientorder/atom requires a pair style be defined
|
|||||||
|
|
||||||
Self-explantory.
|
Self-explantory.
|
||||||
|
|
||||||
|
E: Compute orientorder/atom cutoff is longer than pairwise cutoff
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: More than one compute orientorder/atom
|
W: More than one compute orientorder/atom
|
||||||
|
|
||||||
It is not efficient to use compute orientorder/atom more than once.
|
It is not efficient to use compute orientorder/atom more than once.
|
||||||
|
|||||||
@ -52,4 +52,8 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -106,4 +106,8 @@ E: Compute temp/chunk does not use chunk/atom compute
|
|||||||
|
|
||||||
The style of the specified compute is not chunk/atom.
|
The style of the specified compute is not chunk/atom.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -58,4 +58,8 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -68,4 +68,8 @@ W: Using compute temp/deform with no fix deform defined
|
|||||||
This is probably an error, since it makes little sense to use
|
This is probably an error, since it makes little sense to use
|
||||||
compute temp/deform in this case.
|
compute temp/deform in this case.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -65,4 +65,8 @@ E: Compute temp/partial cannot use vz for 2d systemx
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -83,4 +83,8 @@ E: Compute temp/profile cannot bin z for 2d systems
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -63,4 +63,8 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -63,4 +63,8 @@ E: Region ID for compute temp/region does not exist
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -80,4 +80,8 @@ E: Bias compute group does not match compute group
|
|||||||
The specified compute must operate on the same group as the parent
|
The specified compute must operate on the same group as the parent
|
||||||
compute.
|
compute.
|
||||||
|
|
||||||
|
E: Temperature compute degrees of freedom < 0
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -111,7 +111,11 @@ E: Cannot use delete_atoms bond yes with atom_style template
|
|||||||
This is because the bonds for that atom style are hardwired in the
|
This is because the bonds for that atom style are hardwired in the
|
||||||
molecule template.
|
molecule template.
|
||||||
|
|
||||||
E: Cannot delete_atoms mol yes for non-molecular systems
|
E: Delete_atoms mol yes requires atom attribute molecule
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
U: Cannot delete_atoms mol yes for non-molecular systems
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
|||||||
@ -79,4 +79,12 @@ W: Lost atoms via displace_atoms: original %ld current %ld
|
|||||||
|
|
||||||
The command options you have used caused atoms to be lost.
|
The command options you have used caused atoms to be lost.
|
||||||
|
|
||||||
|
E: Variable name for displace_atoms does not exist
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Variable for displace_atoms is invalid style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -135,6 +135,18 @@ E: Dump image persp option is not yet supported
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Dump image line requires atom style line
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Dump image tri requires atom style tri
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Dump image body yes requires atom style body
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Dump image requires one snapshot per file
|
E: Dump image requires one snapshot per file
|
||||||
|
|
||||||
Use a "*" in the filename.
|
Use a "*" in the filename.
|
||||||
|
|||||||
@ -87,6 +87,10 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: No values in fix ave/chunk command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot open fix ave/chunk file %s
|
E: Cannot open fix ave/chunk file %s
|
||||||
|
|
||||||
The specified file cannot be opened. Check that the path and name are
|
The specified file cannot be opened. Check that the path and name are
|
||||||
@ -160,6 +164,10 @@ E: Fix ave/chunk does not use chunk/atom compute
|
|||||||
|
|
||||||
The specified conpute is not for a compute chunk/atom command.
|
The specified conpute is not for a compute chunk/atom command.
|
||||||
|
|
||||||
|
E: Error writing file header
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix for fix ave/chunk not computed at compatible time
|
E: Fix for fix ave/chunk not computed at compatible time
|
||||||
|
|
||||||
Fixes generate their values on specific timesteps. Fix ave/chunk is
|
Fixes generate their values on specific timesteps. Fix ave/chunk is
|
||||||
@ -170,4 +178,8 @@ E: Invalid timestep reset for fix ave/chunk
|
|||||||
Resetting the timestep has invalidated the sequence of timesteps this
|
Resetting the timestep has invalidated the sequence of timesteps this
|
||||||
fix needs to process.
|
fix needs to process.
|
||||||
|
|
||||||
|
E: Error writing averaged chunk data
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -125,9 +125,17 @@ E: Fix ave/correlate variable is not equal-style variable
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Error writing file header
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid timestep reset for fix ave/correlate
|
E: Invalid timestep reset for fix ave/correlate
|
||||||
|
|
||||||
Resetting the timestep has invalidated the sequence of timesteps this
|
Resetting the timestep has invalidated the sequence of timesteps this
|
||||||
fix needs to process.
|
fix needs to process.
|
||||||
|
|
||||||
|
E: Error writing out correlation data
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -213,11 +213,19 @@ E: Variable name for fix ave/histo does not exist
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Error writing file header
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid timestep reset for fix ave/histo
|
E: Invalid timestep reset for fix ave/histo
|
||||||
|
|
||||||
Resetting the timestep has invalidated the sequence of timesteps this
|
Resetting the timestep has invalidated the sequence of timesteps this
|
||||||
fix needs to process.
|
fix needs to process.
|
||||||
|
|
||||||
|
E: Error writing out histogram data
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot open fix ave/histo file %s
|
E: Cannot open fix ave/histo file %s
|
||||||
|
|
||||||
The specified file cannot be opened. Check that the path and name are
|
The specified file cannot be opened. Check that the path and name are
|
||||||
|
|||||||
@ -50,142 +50,150 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
E: Compute ID for fix ave/histo does not exist
|
E: Fix ave/histo/weight value and weight vector lengths do not match
|
||||||
|
|
||||||
Self-explanatory.
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix ID for fix ave/histo does not exist
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo input is invalid compute
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo input is invalid fix
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo input is invalid variable
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo inputs are not all global, peratom, or local
|
|
||||||
|
|
||||||
All inputs in a single fix ave/histo command must be of the
|
|
||||||
same style.
|
|
||||||
|
|
||||||
E: Fix ave/histo cannot input per-atom values in scalar mode
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo cannot input local values in scalar mode
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a global scalar
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a global vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute vector is accessed out-of-range
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a global array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute array is accessed out-of-range
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate per-atom values
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a per-atom vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a per-atom array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate local values
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a local vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo compute does not calculate a local array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a global scalar
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a global vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix vector is accessed out-of-range
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix for fix ave/histo not computed at compatible time
|
|
||||||
|
|
||||||
Fixes generate their values on specific timesteps. Fix ave/histo is
|
|
||||||
requesting a value on a non-allowed timestep.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a global array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix array is accessed out-of-range
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate per-atom values
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a per-atom vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a per-atom array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate local values
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a local vector
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Fix ave/histo fix does not calculate a local array
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Variable name for fix ave/histo does not exist
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Invalid timestep reset for fix ave/histo
|
E: Invalid timestep reset for fix ave/histo
|
||||||
|
|
||||||
Resetting the timestep has invalidated the sequence of timesteps this
|
Resetting the timestep has invalidated the sequence of timesteps this
|
||||||
fix needs to process.
|
fix needs to process.
|
||||||
|
|
||||||
E: Cannot open fix ave/histo file %s
|
E: Error writing out histogram data
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
U: Compute ID for fix ave/histo does not exist
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ID for fix ave/histo does not exist
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo input is invalid compute
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo input is invalid fix
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo input is invalid variable
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo inputs are not all global, peratom, or local
|
||||||
|
|
||||||
|
All inputs in a single fix ave/histo command must be of the
|
||||||
|
same style.
|
||||||
|
|
||||||
|
U: Fix ave/histo cannot input per-atom values in scalar mode
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo cannot input local values in scalar mode
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a global scalar
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a global vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute vector is accessed out-of-range
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a global array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute array is accessed out-of-range
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate per-atom values
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a per-atom vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a per-atom array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate local values
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a local vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo compute does not calculate a local array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a global scalar
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a global vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix vector is accessed out-of-range
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix for fix ave/histo not computed at compatible time
|
||||||
|
|
||||||
|
Fixes generate their values on specific timesteps. Fix ave/histo is
|
||||||
|
requesting a value on a non-allowed timestep.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a global array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix array is accessed out-of-range
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate per-atom values
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a per-atom vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a per-atom array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate local values
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a local vector
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Fix ave/histo fix does not calculate a local array
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Variable name for fix ave/histo does not exist
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Cannot open fix ave/histo file %s
|
||||||
|
|
||||||
The specified file cannot be opened. Check that the path and name are
|
The specified file cannot be opened. Check that the path and name are
|
||||||
correct.
|
correct.
|
||||||
|
|||||||
@ -88,6 +88,10 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: No values in fix ave/time command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Compute ID for fix ave/time does not exist
|
E: Compute ID for fix ave/time does not exist
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -165,6 +169,10 @@ E: Fix ave/time cannot use variable with vector mode
|
|||||||
|
|
||||||
Variables produce scalar values.
|
Variables produce scalar values.
|
||||||
|
|
||||||
|
E: Error writing file header
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix ave/time cannot set output array intensive/extensive from these inputs
|
E: Fix ave/time cannot set output array intensive/extensive from these inputs
|
||||||
|
|
||||||
One of more of the vector inputs has individual elements which are
|
One of more of the vector inputs has individual elements which are
|
||||||
@ -176,6 +184,10 @@ E: Invalid timestep reset for fix ave/time
|
|||||||
Resetting the timestep has invalidated the sequence of timesteps this
|
Resetting the timestep has invalidated the sequence of timesteps this
|
||||||
fix needs to process.
|
fix needs to process.
|
||||||
|
|
||||||
|
E: Error writing out time averaged data
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix ave/time columns are inconsistent lengths
|
E: Fix ave/time columns are inconsistent lengths
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|||||||
@ -109,14 +109,6 @@ E: Fix move cannot define z or vz variable for 2d problem
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
W: Fix move does not update angular momentum
|
|
||||||
|
|
||||||
Atoms store this quantity, but fix move does not (yet) update it.
|
|
||||||
|
|
||||||
W: Fix move does not update quaternions
|
|
||||||
|
|
||||||
Atoms store this quantity, but fix move does not (yet) update it.
|
|
||||||
|
|
||||||
E: Zero length rotation vector with fix move
|
E: Zero length rotation vector with fix move
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -137,4 +129,12 @@ E: Resetting timestep size is not allowed with fix move
|
|||||||
|
|
||||||
This is because fix move is moving atoms based on elapsed time.
|
This is because fix move is moving atoms based on elapsed time.
|
||||||
|
|
||||||
|
U: Fix move does not update angular momentum
|
||||||
|
|
||||||
|
Atoms store this quantity, but fix move does not (yet) update it.
|
||||||
|
|
||||||
|
U: Fix move does not update quaternions
|
||||||
|
|
||||||
|
Atoms store this quantity, but fix move does not (yet) update it.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -212,6 +212,14 @@ E: Invalid fix nvt/npt/nph pressure settings
|
|||||||
|
|
||||||
Settings for coupled dimensions must be the same.
|
Settings for coupled dimensions must be the same.
|
||||||
|
|
||||||
|
E: Using update dipole flag requires atom style sphere
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Using update dipole flag requires atom attribute mu
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix nvt/npt/nph damping parameters must be > 0.0
|
E: Fix nvt/npt/nph damping parameters must be > 0.0
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|||||||
@ -56,7 +56,11 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
W: Should not use fix nve/limit with fix shake
|
W: Should not use fix nve/limit with fix shake or fix rattle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
U: Should not use fix nve/limit with fix shake
|
||||||
|
|
||||||
This will lead to invalid constraint forces in the SHAKE computation.
|
This will lead to invalid constraint forces in the SHAKE computation.
|
||||||
|
|
||||||
|
|||||||
@ -53,12 +53,16 @@ E: Fix nve/sphere requires atom style sphere
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Fix nve/sphere requires atom attribute mu
|
E: Fix nve/sphere dipole requires atom attribute mu
|
||||||
|
|
||||||
An atom style with this attribute is needed.
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Fix nve/sphere requires extended particles
|
E: Fix nve/sphere requires extended particles
|
||||||
|
|
||||||
This fix can only be used for particles of a finite size.
|
This fix can only be used for particles of a finite size.
|
||||||
|
|
||||||
|
U: Fix nve/sphere requires atom attribute mu
|
||||||
|
|
||||||
|
An atom style with this attribute is needed.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -92,6 +92,10 @@ E: Fix property/atom vector name already exists
|
|||||||
|
|
||||||
The name for an integer or floating-point vector must be unique.
|
The name for an integer or floating-point vector must be unique.
|
||||||
|
|
||||||
|
W: Fix property/atom mol or charge w/out ghost communication
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Atom style was redefined after using fix property/atom
|
E: Atom style was redefined after using fix property/atom
|
||||||
|
|
||||||
This is not allowed.
|
This is not allowed.
|
||||||
@ -101,6 +105,10 @@ E: Incorrect %s format in data file
|
|||||||
A section of the data file being read by fix property/atom does
|
A section of the data file being read by fix property/atom does
|
||||||
not have the correct number of values per line.
|
not have the correct number of values per line.
|
||||||
|
|
||||||
|
E: Too few lines in %s section of data file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom ID in %s section of data file
|
E: Invalid atom ID in %s section of data file
|
||||||
|
|
||||||
An atom in a section of the data file being read by fix property/atom
|
An atom in a section of the data file being read by fix property/atom
|
||||||
|
|||||||
@ -71,4 +71,8 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
E: Invalid fix store command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -68,7 +68,6 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
|
|
||||||
E: Variable name for fix temp/csvr does not exist
|
E: Variable name for fix temp/csvr does not exist
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|||||||
@ -84,7 +84,11 @@ E: Fix wall/region colloid requires extended particles
|
|||||||
|
|
||||||
One of the particles has radius 0.0.
|
One of the particles has radius 0.0.
|
||||||
|
|
||||||
E: Particle on or inside surface of region used in fix wall/region
|
E: Particle outside surface of region used in fix wall/region
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
U: Particle on or inside surface of region used in fix wall/region
|
||||||
|
|
||||||
Particles must be "exterior" to the region surface in order for
|
Particles must be "exterior" to the region surface in order for
|
||||||
energy/force to be calculated.
|
energy/force to be calculated.
|
||||||
|
|||||||
@ -136,6 +136,10 @@ E: Group region ID does not exist
|
|||||||
|
|
||||||
A region ID used in the group command does not exist.
|
A region ID used in the group command does not exist.
|
||||||
|
|
||||||
|
E: Illegal range increment value
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Variable name for group does not exist
|
E: Variable name for group does not exist
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|||||||
36
src/info.h
36
src/info.h
@ -41,15 +41,39 @@ class Info : protected Pointers {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
E: Illegal ... command
|
|
||||||
|
|
||||||
Self-explanatory. Check the input script syntax and compare to the
|
|
||||||
documentation for the command. You can use -echo screen as a
|
|
||||||
command-line option when running LAMMPS to see the offending line.
|
|
||||||
|
|
||||||
W: Ignoring unknown or incorrect info command flag
|
W: Ignoring unknown or incorrect info command flag
|
||||||
|
|
||||||
Self-explanatory. The an unknown argument was given to the info command.
|
Self-explanatory. The an unknown argument was given to the info command.
|
||||||
Compare your input with the documentation.
|
Compare your input with the documentation.
|
||||||
|
|
||||||
|
E: Unknown name for package category
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Unknown name for newton category
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Unknown name for pair category
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Unknown category for is_active()
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Unknown category for is_available()
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Unknown category for is_defined()
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
U: Illegal ... command
|
||||||
|
|
||||||
|
Self-explanatory. Check the input script syntax and compare to the
|
||||||
|
documentation for the command. You can use -echo screen as a
|
||||||
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -200,6 +200,14 @@ E: Cannot open print file %s
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
W: shell command '%s' failed with error '%s'
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
W: shell command returned with non-zero status
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Angle_coeff command before simulation box is defined
|
E: Angle_coeff command before simulation box is defined
|
||||||
|
|
||||||
The angle_coeff command cannot be used before a read_data,
|
The angle_coeff command cannot be used before a read_data,
|
||||||
|
|||||||
116
src/molecule.h
116
src/molecule.h
@ -165,6 +165,10 @@ class Molecule : protected Pointers {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Molecule template ID must be alphanumeric or underscore characters
|
E: Molecule template ID must be alphanumeric or underscore characters
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -181,9 +185,29 @@ E: Molecule file z center-of-mass must be 0.0 for 2d
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: No atom count in molecule file
|
E: Molecule file requires atom style body
|
||||||
|
|
||||||
Self-explanatory.
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: No or invalid atom count in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid bond count in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid angle count in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid dihedral count in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid improper count in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Molecule file has bonds but no nbonds setting
|
E: Molecule file has bonds but no nbonds setting
|
||||||
|
|
||||||
@ -209,6 +233,10 @@ E: Molecule file shake flags not before shake bonds
|
|||||||
|
|
||||||
The order of the two sections is important.
|
The order of the two sections is important.
|
||||||
|
|
||||||
|
E: Molecule file has body params but no setting for them
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Unknown section in molecule file
|
E: Unknown section in molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -221,30 +249,66 @@ E: Molecule file has special flags but no bonds
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Molecule file has bonds but no special flags
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Molecule file shake info is incomplete
|
E: Molecule file shake info is incomplete
|
||||||
|
|
||||||
All 3 SHAKE sections are needed.
|
All 3 SHAKE sections are needed.
|
||||||
|
|
||||||
|
E: Molecule file has no Body Integers section
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Molecule file has no Body Doubles section
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Molecule natoms must be 1 for body particle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Molecule sizescale must be 1.0 for body particle
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid Coords section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Molecule file z coord must be 0.0 for 2d
|
E: Molecule file z coord must be 0.0 for 2d
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Invalid Types section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom type in molecule file
|
E: Invalid atom type in molecule file
|
||||||
|
|
||||||
Atom types must range from 1 to specified # of types.
|
Atom types must range from 1 to specified # of types.
|
||||||
|
|
||||||
|
E: Invalid Charges section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Invalid Diameters section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom diameter in molecule file
|
E: Invalid atom diameter in molecule file
|
||||||
|
|
||||||
Diameters must be >= 0.0.
|
Diameters must be >= 0.0.
|
||||||
|
|
||||||
|
E: Invalid Masses section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom mass in molecule file
|
E: Invalid atom mass in molecule file
|
||||||
|
|
||||||
Masses must be > 0.0.
|
Masses must be > 0.0.
|
||||||
|
|
||||||
|
E: Invalid Bonds section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom ID in Bonds section of molecule file
|
E: Invalid atom ID in Bonds section of molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -253,6 +317,10 @@ E: Invalid bond type in Bonds section of molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Invalid Angles section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom ID in Angles section of molecule file
|
E: Invalid atom ID in Angles section of molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -261,6 +329,10 @@ E: Invalid angle type in Angles section of molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Invalid Dihedrals section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom ID in dihedrals section of molecule file
|
E: Invalid atom ID in dihedrals section of molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -269,6 +341,10 @@ E: Invalid dihedral type in dihedrals section of molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Invalid Impropers section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid atom ID in impropers section of molecule file
|
E: Invalid atom ID in impropers section of molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -277,6 +353,10 @@ E: Invalid improper type in impropers section of molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Invalid Special Bond Counts section in molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Molecule file special list does not match special count
|
E: Molecule file special list does not match special count
|
||||||
|
|
||||||
The number of values in an atom's special list does not match count.
|
The number of values in an atom's special list does not match count.
|
||||||
@ -285,6 +365,14 @@ E: Invalid special atom index in molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Molecule auto special bond generation overflow
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E:
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid shake flag in molecule file
|
E: Invalid shake flag in molecule file
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -301,6 +389,14 @@ E: Invalid shake angle type in molecule file
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Too few values in body section of molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Too many values in body section of molecule file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: Molecule attributes do not match system attributes
|
W: Molecule attributes do not match system attributes
|
||||||
|
|
||||||
An attribute is specified (e.g. diameter, charge) that is
|
An attribute is specified (e.g. diameter, charge) that is
|
||||||
@ -328,4 +424,12 @@ E: Cannot open molecule file %s
|
|||||||
The specified file cannot be opened. Check that the path and name are
|
The specified file cannot be opened. Check that the path and name are
|
||||||
correct.
|
correct.
|
||||||
|
|
||||||
|
U: No atom count in molecule file
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
|
U: Molecule file has bonds but no special flags
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
22
src/neigh_shardlow.h
Normal file
22
src/neigh_shardlow.h
Normal file
@ -0,0 +1,22 @@
|
|||||||
|
/* -*- c++ -*- ----------------------------------------------------------
|
||||||
|
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
|
||||||
|
http://lammps.sandia.gov, Sandia National Laboratories
|
||||||
|
Steve Plimpton, sjplimp@sandia.gov
|
||||||
|
|
||||||
|
Copyright (2003) Sandia Corporation. Under the terms of Contract
|
||||||
|
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
|
||||||
|
certain rights in this software. This software is distributed under
|
||||||
|
the GNU General Public License.
|
||||||
|
|
||||||
|
See the README file in the top-level LAMMPS directory.
|
||||||
|
------------------------------------------------------------------------- */
|
||||||
|
|
||||||
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Neighbor list overflow, boost neigh_modify one
|
||||||
|
|
||||||
|
There are too many neighbors of a single atom. Use the neigh_modify
|
||||||
|
command to increase the max number of neighbors allowed for one atom.
|
||||||
|
You may also want to boost the page size.
|
||||||
|
|
||||||
|
*/
|
||||||
@ -285,6 +285,14 @@ This is probably a bogus thing to do, since tail corrections are
|
|||||||
computed by integrating the density of a periodic system out to
|
computed by integrating the density of a periodic system out to
|
||||||
infinity.
|
infinity.
|
||||||
|
|
||||||
|
W: Using pair tail corrections with compute set to no
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
W: Using pair potential shift with compute set to no
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: Using a manybody potential with bonds/angles/dihedrals and special_bond exclusions
|
W: Using a manybody potential with bonds/angles/dihedrals and special_bond exclusions
|
||||||
|
|
||||||
This is likely not what you want to do. The exclusion settings will
|
This is likely not what you want to do. The exclusion settings will
|
||||||
|
|||||||
@ -87,16 +87,16 @@ class PairHybrid : public Pair {
|
|||||||
|
|
||||||
/* ERROR/WARNING messages:
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Cannot yet use pair hybrid with Kokkos
|
||||||
|
|
||||||
|
This feature is not yet supported.
|
||||||
|
|
||||||
E: Illegal ... command
|
E: Illegal ... command
|
||||||
|
|
||||||
Self-explanatory. Check the input script syntax and compare to the
|
Self-explanatory. Check the input script syntax and compare to the
|
||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
E: Cannot yet use pair hybrid with Kokkos
|
|
||||||
|
|
||||||
This feature is not yet supported.
|
|
||||||
|
|
||||||
E: Pair style hybrid cannot have hybrid as an argument
|
E: Pair style hybrid cannot have hybrid as an argument
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -118,6 +118,14 @@ E: Pair hybrid sub-style is not used
|
|||||||
No pair_coeff command used a sub-style specified in the pair_style
|
No pair_coeff command used a sub-style specified in the pair_style
|
||||||
command.
|
command.
|
||||||
|
|
||||||
|
E: Pair_modify special setting incompatible with global special_bonds setting
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Pair_modify special setting incompatible withglobal special_bonds setting
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: All pair coeffs are not set
|
E: All pair coeffs are not set
|
||||||
|
|
||||||
All pair coefficients must be set in the data file or by the
|
All pair coefficients must be set in the data file or by the
|
||||||
@ -134,6 +142,10 @@ E: Pair hybrid sub-style does not support single call
|
|||||||
You are attempting to invoke a single() call on a pair style
|
You are attempting to invoke a single() call on a pair style
|
||||||
that doesn't support it.
|
that doesn't support it.
|
||||||
|
|
||||||
|
E: Pair hybrid single calls do not support per sub-style special bond values
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Unknown pair_modify hybrid sub-style
|
E: Unknown pair_modify hybrid sub-style
|
||||||
|
|
||||||
The choice of sub-style is unknown.
|
The choice of sub-style is unknown.
|
||||||
|
|||||||
100
src/read_data.h
100
src/read_data.h
@ -124,28 +124,59 @@ Self-explanatory. Check the input script syntax and compare to the
|
|||||||
documentation for the command. You can use -echo screen as a
|
documentation for the command. You can use -echo screen as a
|
||||||
command-line option when running LAMMPS to see the offending line.
|
command-line option when running LAMMPS to see the offending line.
|
||||||
|
|
||||||
E: Fix ID for read_data does not exist
|
E: Read data add offset is too big
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Non-zero read_data shift z value for 2d simulation
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: No bonds allowed with this atom style
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Cannot read_data after simulation box is defined
|
E: No angles allowed with this atom style
|
||||||
|
|
||||||
The read_data command cannot be used after a read_data,
|
Self-explanatory.
|
||||||
read_restart, or create_box command.
|
|
||||||
|
|
||||||
E: Cannot read_data add and merge
|
E: No dihedrals allowed with this atom style
|
||||||
|
|
||||||
These options are not yet supported.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Cannot use non-zero z offset in read_data for 2d simulation
|
E: No impropers allowed with this atom style
|
||||||
|
|
||||||
The offset option is not yet supported.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Fix ID for read_data does not exist
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
E: Cannot run 2d simulation with nonperiodic Z dimension
|
E: Cannot run 2d simulation with nonperiodic Z dimension
|
||||||
|
|
||||||
Use the boundary command to make the z dimension periodic in order to
|
Use the boundary command to make the z dimension periodic in order to
|
||||||
run a 2d simulation.
|
run a 2d simulation.
|
||||||
|
|
||||||
|
E: Cannot read_data without add keyword after simulation box is defined
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use read_data add before simulation box is defined
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use read_data offset without add flag
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use read_data shift without add flag
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot use read_data extra with add flag
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
W: Atom style in data file differs from currently defined atom style
|
W: Atom style in data file differs from currently defined atom style
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -411,22 +442,6 @@ E: System in data file is too big
|
|||||||
|
|
||||||
See the setting for bigint in the src/lmptype.h file.
|
See the setting for bigint in the src/lmptype.h file.
|
||||||
|
|
||||||
E: No bonds allowed with this atom style
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: No angles allowed with this atom style
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: No dihedrals allowed with this atom style
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: No impropers allowed with this atom style
|
|
||||||
|
|
||||||
Self-explanatory.
|
|
||||||
|
|
||||||
E: Bonds defined but no bond types
|
E: Bonds defined but no bond types
|
||||||
|
|
||||||
The data file header lists bonds but no bond types.
|
The data file header lists bonds but no bond types.
|
||||||
@ -454,29 +469,53 @@ Atoms read in from a data file were not assigned correctly to
|
|||||||
processors. This is likely due to some atom coordinates being
|
processors. This is likely due to some atom coordinates being
|
||||||
outside a non-periodic simulation box.
|
outside a non-periodic simulation box.
|
||||||
|
|
||||||
|
E: Subsequent read data induced too many bonds per atom
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Bonds assigned incorrectly
|
E: Bonds assigned incorrectly
|
||||||
|
|
||||||
Bonds read in from the data file were not assigned correctly to atoms.
|
Bonds read in from the data file were not assigned correctly to atoms.
|
||||||
This means there is something invalid about the topology definitions.
|
This means there is something invalid about the topology definitions.
|
||||||
|
|
||||||
|
E: Subsequent read data induced too many angles per atom
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Angles assigned incorrectly
|
E: Angles assigned incorrectly
|
||||||
|
|
||||||
Angles read in from the data file were not assigned correctly to
|
Angles read in from the data file were not assigned correctly to
|
||||||
atoms. This means there is something invalid about the topology
|
atoms. This means there is something invalid about the topology
|
||||||
definitions.
|
definitions.
|
||||||
|
|
||||||
|
E: Subsequent read data induced too many dihedrals per atom
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Dihedrals assigned incorrectly
|
E: Dihedrals assigned incorrectly
|
||||||
|
|
||||||
Dihedrals read in from the data file were not assigned correctly to
|
Dihedrals read in from the data file were not assigned correctly to
|
||||||
atoms. This means there is something invalid about the topology
|
atoms. This means there is something invalid about the topology
|
||||||
definitions.
|
definitions.
|
||||||
|
|
||||||
|
E: Subsequent read data induced too many impropers per atom
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Impropers assigned incorrectly
|
E: Impropers assigned incorrectly
|
||||||
|
|
||||||
Impropers read in from the data file were not assigned correctly to
|
Impropers read in from the data file were not assigned correctly to
|
||||||
atoms. This means there is something invalid about the topology
|
atoms. This means there is something invalid about the topology
|
||||||
definitions.
|
definitions.
|
||||||
|
|
||||||
|
E: Too few values in body lines in data file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Too many values in body lines in data file
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Too many lines in one body in data file - boost MAXBODY
|
E: Too many lines in one body in data file - boost MAXBODY
|
||||||
|
|
||||||
MAXBODY is a setting at the top of the src/read_data.cpp file.
|
MAXBODY is a setting at the top of the src/read_data.cpp file.
|
||||||
@ -513,4 +552,17 @@ The specified file cannot be opened. Check that the path and name are
|
|||||||
correct. If the file is a compressed file, also check that the gzip
|
correct. If the file is a compressed file, also check that the gzip
|
||||||
executable can be found and run.
|
executable can be found and run.
|
||||||
|
|
||||||
|
U: Cannot read_data after simulation box is defined
|
||||||
|
|
||||||
|
The read_data command cannot be used after a read_data,
|
||||||
|
read_restart, or create_box command.
|
||||||
|
|
||||||
|
U: Cannot read_data add and merge
|
||||||
|
|
||||||
|
These options are not yet supported.
|
||||||
|
|
||||||
|
U: Cannot use non-zero z offset in read_data for 2d simulation
|
||||||
|
|
||||||
|
The offset option is not yet supported.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -172,6 +172,10 @@ W: Restart file used different boundary settings, using restart file values
|
|||||||
|
|
||||||
Your input script cannot change these restart file settings.
|
Your input script cannot change these restart file settings.
|
||||||
|
|
||||||
|
E: Illegal or unset periodicity in restart
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Invalid flag in header section of restart file
|
E: Invalid flag in header section of restart file
|
||||||
|
|
||||||
Unrecognized entry in restart file.
|
Unrecognized entry in restart file.
|
||||||
@ -216,4 +220,16 @@ E: Restart file byte ordering is not recognized
|
|||||||
The file does not appear to be a LAMMPS restart file since it doesn't
|
The file does not appear to be a LAMMPS restart file since it doesn't
|
||||||
contain a recognized byte-orderomg flag at the beginning.
|
contain a recognized byte-orderomg flag at the beginning.
|
||||||
|
|
||||||
|
E: Illegal size string or corrupt restart
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Illegal size integer vector read requested
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Illegal size double vector read requested
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -100,6 +100,10 @@ E: Variable for region is not equal style
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Can only use Kokkos supported regions with Kokkos package
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Illegal ... command
|
E: Illegal ... command
|
||||||
|
|
||||||
Self-explanatory. Check the input script syntax and compare to the
|
Self-explanatory. Check the input script syntax and compare to the
|
||||||
|
|||||||
12
src/respa.h
12
src/respa.h
@ -93,12 +93,6 @@ In the rRESPA integrator, you must compute pairwise potentials either
|
|||||||
all together (pair), or in pieces (inner/middle/outer). You can't do
|
all together (pair), or in pieces (inner/middle/outer). You can't do
|
||||||
both.
|
both.
|
||||||
|
|
||||||
E: Cannot set respa hybrid and any of pair/inner/middle/outer
|
|
||||||
|
|
||||||
In the rRESPA integrator, you must compute pairwise potentials either
|
|
||||||
all together (pair), with different cutoff regions (inner/middle/outer),
|
|
||||||
or per hybrid sub-style (hybrid). You cannot mix those.
|
|
||||||
|
|
||||||
E: Must set both respa inner and outer
|
E: Must set both respa inner and outer
|
||||||
|
|
||||||
Cannot use just the inner or outer option with respa without using the
|
Cannot use just the inner or outer option with respa without using the
|
||||||
@ -109,6 +103,12 @@ E: Cannot set respa middle without inner/outer
|
|||||||
In the rRESPA integrator, you must define both a inner and outer
|
In the rRESPA integrator, you must define both a inner and outer
|
||||||
setting in order to use a middle setting.
|
setting in order to use a middle setting.
|
||||||
|
|
||||||
|
E: Cannot set respa hybrid and any of pair/inner/middle/outer
|
||||||
|
|
||||||
|
In the rRESPA integrator, you must compute pairwise potentials either
|
||||||
|
all together (pair), with different cutoff regions (inner/middle/outer),
|
||||||
|
or per hybrid sub-style (hybrid). You cannot mix those.
|
||||||
|
|
||||||
E: Invalid order of forces within respa levels
|
E: Invalid order of forces within respa levels
|
||||||
|
|
||||||
For respa, ordering of force computations within respa levels must
|
For respa, ordering of force computations within respa levels must
|
||||||
|
|||||||
32
src/set.h
32
src/set.h
@ -98,9 +98,29 @@ E: Cannot set non-zero image flag for non-periodic dimension
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
E: Cannot set meso_rho for this atom style
|
E: Cannot set meso/e for this atom style
|
||||||
|
|
||||||
Self-explanatory.
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set meso/cv for this atom style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set meso/rho for this atom style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set smd/mass/density for this atom style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set smd/contact/radius for this atom style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
E: Cannot set dpd/theta for this atom style
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Set command integer vector does not exist
|
E: Set command integer vector does not exist
|
||||||
|
|
||||||
@ -146,6 +166,10 @@ E: Cannot set quaternion for atom that has none
|
|||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
|
|
||||||
|
E: Cannot set quaternion with xy components for 2d system
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
E: Cannot set theta for atom that is not a line
|
E: Cannot set theta for atom that is not a line
|
||||||
|
|
||||||
Self-explanatory.
|
Self-explanatory.
|
||||||
@ -187,4 +211,8 @@ E: Variable for set command is invalid style
|
|||||||
|
|
||||||
Only atom-style variables can be used.
|
Only atom-style variables can be used.
|
||||||
|
|
||||||
|
U: Cannot set meso_rho for this atom style
|
||||||
|
|
||||||
|
Self-explanatory.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
@ -75,3 +75,11 @@ class Timer : protected Pointers {
|
|||||||
}
|
}
|
||||||
|
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
/* ERROR/WARNING messages:
|
||||||
|
|
||||||
|
E: Illegal ... command
|
||||||
|
|
||||||
|
UNDOCUMENTED
|
||||||
|
|
||||||
|
*/
|
||||||
|
|||||||
@ -90,10 +90,6 @@ E: Timestep must be >= 0
|
|||||||
|
|
||||||
Specified timestep is invalid.
|
Specified timestep is invalid.
|
||||||
|
|
||||||
E: Too big a timestep
|
|
||||||
|
|
||||||
Specified timestep is too large.
|
|
||||||
|
|
||||||
E: Cannot reset timestep with a time-dependent fix defined
|
E: Cannot reset timestep with a time-dependent fix defined
|
||||||
|
|
||||||
You cannot reset the timestep when a fix that keeps track of elapsed
|
You cannot reset the timestep when a fix that keeps track of elapsed
|
||||||
@ -105,4 +101,8 @@ Dynamic regions (see the region command) have a time dependence.
|
|||||||
Thus you cannot change the timestep when one or more of these
|
Thus you cannot change the timestep when one or more of these
|
||||||
are defined.
|
are defined.
|
||||||
|
|
||||||
|
U: Too big a timestep
|
||||||
|
|
||||||
|
Specified timestep is too large.
|
||||||
|
|
||||||
*/
|
*/
|
||||||
|
|||||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user