doc pages 949-1220

doc/src/Developer_grid.rst

@@ -433,7 +433,7 @@ from owned to ghost cells, or ghost to owned cells, respectively, as
 described above.  The *caller* argument should be one of these values
 -- Grid3d::COMPUTE, Grid3d::FIX, Grid3d::KSPACE, Grid3d::PAIR --
 depending on the style of the caller class.  The *ptr* argument is the
-"this" pointer to the caller class.  These 2 arguments are used to
+"this" pointer to the caller class.  These two arguments are used to
 call back to pack()/unpack() functions in the caller class, as
 explained below.
 

doc/src/atom_style.rst

@@ -419,7 +419,7 @@ showing the use of the *template* atom style versus *molecular*.
    <molecule>` that contains multiple molecules, you should ensure the
    atom types, bond types, angle_types, etc in all the molecules are
    consistent.  E.g. if one molecule represents H2O and another CO2,
-   then you probably do not want each molecule file to define 2 atom
+   then you probably do not want each molecule file to define two atom
    types and a single bond type, because they will conflict with each
    other when a mixture system of H2O and CO2 molecules is defined,
    e.g. by the :doc:`read_data <read_data>` command.  Rather the H2O

doc/src/bond_style.rst

@@ -59,10 +59,10 @@ coefficients need to be re-specified.
    When both a bond and pair style is defined, the
    :doc:`special_bonds <special_bonds>` command often needs to be used to
    turn off (or weight) the pairwise interaction that would otherwise
-   exist between 2 bonded atoms.
+   exist between two bonded atoms.
 
 In the formulas listed for each bond style, *r* is the distance
-between the 2 atoms in the bond.
+between the two atoms in the bond.
 
 ----------
 

doc/src/bond_write.rst

@@ -15,7 +15,7 @@ Syntax
 * inner,outer = inner and outer bond length (distance units)
 * file = name of file to write values to
 * keyword = section name in file for this set of tabulated values
-* itype,jtype = 2 atom types (optional)
+* itype,jtype = two atom types (optional)
 
 Examples
 """"""""
@@ -39,7 +39,7 @@ of the file to allow multiple tables of energy and force to be included
 in one file.  The individual sections may be identified by the *keyword*.
 
 The energy and force values are computed at distances from *inner* to
-*outer* for 2 interacting atoms forming a bond of type *btype*, using
+*outer* for two interacting atoms forming a bond of type *btype*, using
 the appropriate :doc:`bond_coeff <bond_coeff>` coefficients. N evenly
 spaced distances are used.
 

doc/src/clear.rst

@@ -36,7 +36,8 @@ script variables except for *atomfile* style variables (:doc:`variable
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""

doc/src/comm_style.rst

@@ -55,7 +55,7 @@ commands.  The decomposition can be changed via the
 Restrictions
 """"""""""""
 
-None
+none
 
 Related commands
 """"""""""""""""

doc/src/compute.rst

@@ -362,7 +362,8 @@ The individual style names on the :doc:`Commands compute <Commands_compute>` pag
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""

doc/src/delete_atoms.rst

@@ -73,7 +73,7 @@ keyword discussion below.
 
 For style *overlap* pairs of atoms whose distance of separation is
 within the specified cutoff distance are searched for, and one of the
-2 atoms is deleted.  Only pairs where one of the two atoms is in the
+two atoms is deleted.  Only pairs where one of the two atoms is in the
 first group specified and the other atom is in the second group are
 considered.  The atom that is in the first group is the one that is
 deleted.

doc/src/dump_image.rst

@@ -389,7 +389,7 @@ cylinders with that diameter, e.g. 1.0, which is in whatever distance
 
 If *atom* is specified for the *width* value, then each bond
 will be drawn with a width corresponding to the minimum diameter
-of the 2 atoms in the bond.
+of the two atoms in the bond.
 
 If *type* is specified for the *width* value then the diameter of each
 bond is determined by its bond type.  By default all types have

doc/src/if.rst

@@ -206,7 +206,8 @@ FALSE.
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""

doc/src/improper_style.rst

@@ -76,7 +76,6 @@ more of (g,i,k,o,t) to indicate which accelerated styles exist.
 * :doc:`none <improper_none>` - turn off improper interactions
 * :doc:`zero <improper_zero>` - topology but no interactions
 * :doc:`hybrid <improper_hybrid>` - define multiple styles of improper interactions
-
 * :doc:`amoeba <improper_amoeba>` - AMOEBA out-of-plane improper
 * :doc:`class2 <improper_class2>` - COMPASS (class 2) improper
 * :doc:`cossq <improper_cossq>` - improper with a cosine squared term
@@ -88,8 +87,7 @@ more of (g,i,k,o,t) to indicate which accelerated styles exist.
 * :doc:`inversion/harmonic <improper_inversion_harmonic>` - harmonic improper with Wilson-Decius out-of-plane definition
 * :doc:`ring <improper_ring>` - improper which prevents planar conformations
 * :doc:`umbrella <improper_umbrella>` - DREIDING improper
-
+* :doc:`sqdistharm <improper_sqdistharm>` - improper that is harmonic in the square of the out-of-plane distance
-:doc:`sqdistharm <improper_sqdistharm>` - improper that is harmonic in the square of the out-of-plane distance
 
 ----------
 

doc/src/include.rst

@@ -35,7 +35,8 @@ scripts.
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""

doc/src/info.rst

@@ -130,7 +130,8 @@ process that writes output (usually MPI rank 0).
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""

doc/src/kim_commands.rst

@@ -428,7 +428,7 @@ Syntax
 * variable(s) = single name or list of names of (string style) LAMMPS
   variable(s) where a query result or parameter get result is stored.  Variables
   that do not exist will be created by the command
-* formatarg = *list, split, or index* (optional):
+* formatarg = *list* or *split* or *index* (optional)
 
   .. parsed-literal::
 
@@ -697,17 +697,18 @@ Syntax
 * variable(s) = single name or list of names of (string style) LAMMPS
   variable(s) where a query result or parameter get result is stored.  Variables
   that do not exist will be created by the command
-* formatarg = *list, split, or explicit* (optional):
+* formatarg = *list* or *split* or *explicit* (optional)
+
   .. parsed-literal::
 
      *list* = returns a single string with a list of space separated values
             (e.g. "1.0 2.0 3.0"), which is placed in a LAMMPS variable as
-            defined by the *variable* argument.
+            defined by the *variable* argument
      *split* = returns the values separately in new variables with names based
             on the prefix specified in *variable* and a number appended to
             indicate which element in the list of values is in the variable
      *explicit* = returns the values separately in one more more variable names
-            provided as arguments that precede *formatarg*\ . [default]
+            provided as arguments that precede *formatarg* (default)
 * values = new value(s) to replace the current value(s) of a KIM portable model
   parameter
 

doc/src/kspace_modify.rst

@@ -459,7 +459,7 @@ The option defaults are as follows:
 * diff = ik (PPPM)
 * disp/auto = no
 * fftbench = no (PPPM)
-* force = -1.0,
+* force = -1.0
 * force/disp/kspace = -1.0
 * force/disp/real = -1.0
 * gewald = gewald/disp = 0.0

doc/src/log.rst

@@ -39,7 +39,8 @@ name of the initial log file can also be set by the :doc:`-log command-line swit
 
 Restrictions
 """"""""""""
- none
+
+none
 
 Related commands
 """"""""""""""""