From a517cffd8fe2b18968dffbf766cf7fc84ed2cec5 Mon Sep 17 00:00:00 2001 From: charlie sievers Date: Mon, 14 Oct 2019 14:41:03 -0700 Subject: [PATCH] Corrected differing syntax in fix_langevin.cpp --- src/fix_langevin.cpp | 48 ++++++++++++++++++++++---------------------- 1 file changed, 24 insertions(+), 24 deletions(-) diff --git a/src/fix_langevin.cpp b/src/fix_langevin.cpp index c12cdbaa26..01952f786c 100644 --- a/src/fix_langevin.cpp +++ b/src/fix_langevin.cpp @@ -111,14 +111,17 @@ FixLangevin::FixLangevin(LAMMPS *lmp, int narg, char **arg) : iarg += 2; } else if (strcmp(arg[iarg],"gjf") == 0) { if (iarg+2 > narg) error->all(FLERR,"Illegal fix langevin command"); - if (strcmp(arg[iarg+1],"no") == 0) {gjfflag = 0; osflag = 0;} + if (strcmp(arg[iarg+1],"no") == 0) { + gjfflag = 0; + osflag = 0; + } else if (strcmp(arg[iarg+1],"vfull") == 0) { - gjfflag = 1; - osflag = 1; + gjfflag = 1; + osflag = 1; } else if (strcmp(arg[iarg+1],"vhalf") == 0) { - gjfflag = 1; - osflag = 0; + gjfflag = 1; + osflag = 0; } else error->all(FLERR,"Illegal fix langevin command"); iarg += 2; @@ -229,7 +232,7 @@ int FixLangevin::setmask() void FixLangevin::init() { - if (gjfflag){ + if (gjfflag) { if (t_period*2 == update->dt) error->all(FLERR,"Fix langevin gjf cannot have t_period equal to dt/2"); @@ -323,7 +326,7 @@ void FixLangevin::init() void FixLangevin::setup(int vflag) { - if (gjfflag){ + if (gjfflag) { double dtfm; double dt = update->dt; double **v = atom->v; @@ -373,7 +376,7 @@ void FixLangevin::setup(int vflag) post_force_respa(vflag,nlevels_respa-1,0); ((Respa *) update->integrate)->copy_f_flevel(nlevels_respa-1); } - if (gjfflag){ + if (gjfflag) { double dtfm; double dt = update->dt; double **f = atom->f; @@ -420,7 +423,7 @@ void FixLangevin::initial_integrate(int /* vflag */) int nlocal = atom->nlocal; for (int i = 0; i < nlocal; i++) - if (mask[i] & groupbit){ + if (mask[i] & groupbit) { f[i][0] /= gjfa; f[i][1] /= gjfa; f[i][2] /= gjfa; @@ -660,12 +663,11 @@ void FixLangevin::post_force_templated() gamma2 = gfactor2[type[i]] * tsqrt; } - if (Tp_GJF){ + if (Tp_GJF) { fran[0] = gamma2*random->gaussian(); fran[1] = gamma2*random->gaussian(); fran[2] = gamma2*random->gaussian(); - } - else{ + } else { fran[0] = gamma2*(random->uniform()-0.5); fran[1] = gamma2*(random->uniform()-0.5); fran[2] = gamma2*(random->uniform()-0.5); @@ -729,7 +731,7 @@ void FixLangevin::post_force_templated() } if (Tp_TALLY) { - if (Tp_GJF){ + if (Tp_GJF) { fdrag[0] = gamma1*lv[i][0]/gjfsib/gjfsib; fdrag[1] = gamma1*lv[i][1]/gjfsib/gjfsib; fdrag[2] = gamma1*lv[i][2]/gjfsib/gjfsib; @@ -938,8 +940,8 @@ void FixLangevin::end_of_step() energy_onestep = 0.0; - if (tallyflag){ - if (gjfflag){ + if (tallyflag) { + if (gjfflag) { for (int i = 0; i < nlocal; i++) if (mask[i] & groupbit) { if (tbiasflag) @@ -957,19 +959,18 @@ void FixLangevin::end_of_step() flangevin[i][2]*v[i][2]; } - if (gjfflag){ + if (gjfflag) { double tmp[3]; for (int i = 0; i < nlocal; i++) - if (mask[i] & groupbit){ + if (mask[i] & groupbit) { tmp[0] = v[i][0]; tmp[1] = v[i][1]; tmp[2] = v[i][2]; - if (!osflag){ + if (!osflag) { v[i][0] = lv[i][0]; v[i][1] = lv[i][1]; v[i][2] = lv[i][2]; - } - else{ + } else { if (atom->rmass) { dtfm = force->ftm2v * 0.5 * dt / rmass[i]; } else { @@ -1064,16 +1065,15 @@ double FixLangevin::compute_scalar() if (update->ntimestep == update->beginstep) { energy_onestep = 0.0; - if (!gjfflag){ + if (!gjfflag) { for (int i = 0; i < nlocal; i++) if (mask[i] & groupbit) energy_onestep += flangevin[i][0]*v[i][0] + flangevin[i][1]*v[i][1] + flangevin[i][2]*v[i][2]; energy = 0.5*energy_onestep*update->dt; - } - else{ + } else { for (int i = 0; i < nlocal; i++) - if (mask[i] & groupbit){ + if (mask[i] & groupbit) { if (tbiasflag) temperature->remove_bias(i, lv[i]); energy_onestep += flangevin[i][0]*lv[i][0] + flangevin[i][1]*lv[i][1] +