diff --git a/doc/Section_python.html b/doc/Section_python.html index 07666e67fe..9a561cb74c 100644 --- a/doc/Section_python.html +++ b/doc/Section_python.html @@ -609,14 +609,14 @@ distribution.
For the viz_tool.py and vizplotgui_tool.py commands, replace "tool" -with "gl" or "atomeye" or "pymol", depending on what visualization -package you have installed. We hope to add a VMD option soon. +with "gl" or "atomeye" or "pymol" or "vmd", depending on what +visualization package you have installed.
Note that for GL, you need to be able to run the Pizza.py GL tool, which is included in the pizza sub-directory. See the Pizza.py doc @@ -624,7 +624,7 @@ pages for more info:
-Note that for AtomEye, you need version 3, and their is a line in the +
Note that for AtomEye, you need version 3, and there is a line in the scripts that specifies the path and name of the executable. See the AtomEye WWW pages here or here for more details:
@@ -652,6 +652,10 @@ http://sourceforge.net/scm/?type=svn&group_id=4546The latter link is to the open-source version.
+Note that for VMD, you need a fairly current version (1.8.7 works for +me) and there are some lines in the pizza/vmd.py script for 4 PIZZA +variables that have to match the VMD installation on your system. +
See the python/README file for instructions on how to run them and the
@@ -666,4 +670,6 @@ different visualization package options. Click to see larger images:
+
+