git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6809 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2011-08-25 17:01:01 +00:00
parent a3add0b021
commit a8cf1de735
338 changed files with 1081 additions and 1063 deletions

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@ -676,8 +676,8 @@ build will likely fail.
LAMMPS itself can be built as a library, which can then be called from
another application or a scripting language. See "this
section"_Section_howto.html#4_10 for more info on coupling LAMMPS to
other codes. Building LAMMPS as a library is done by typing
section"_Section_howto.html#howto_10 for more info on coupling LAMMPS
to other codes. Building LAMMPS as a library is done by typing
make makelib
make -f Makefile.lib foo :pre
@ -703,15 +703,15 @@ src/library.cpp and src/library.h.
See the sample codes couple/simple/simple.cpp and simple.c as examples
of C++ and C codes that invoke LAMMPS thru its library interface.
There are other examples as well in the couple directory which are
discussed in "this section"_Section_howto.html#4_10 of the manual.
discussed in "this section"_Section_howto.html#howto_10 of the manual.
See "this section"_Section_python.html of the manual for a description
of the Python wrapper provided with LAMMPS that operates through the
LAMMPS library interface.
The files src/library.cpp and library.h contain the C-style interface
to LAMMPS. See "this section"_Section_howto.html#4_19 of the manual
for a description of the interface and how to extend it for your
needs.
to LAMMPS. See "this section"_Section_howto.html#howto_19 of the
manual for a description of the interface and how to extend it for
your needs.
:line
@ -916,12 +916,12 @@ processors.
Note that with MPI installed on a machine (e.g. your desktop), you can
run on more (virtual) processors than you have physical processors.
This can be useful for running "multi-replica
simulations"_Section_howto.html#4_5, on one or a few processors.
simulations"_Section_howto.html#howto_5, on one or a few processors.
The input script specifies what simulation is run on which partition;
see the "variable"_variable.html and "next"_next.html commands. This
"howto section"_Section_howto.html#4_4 gives examples of how to use
these commands in this way. Simulations running on different
"howto section"_Section_howto.html#howto_4 gives examples of how to
use these commands in this way. Simulations running on different
partitions can also communicate with each other; see the
"temper"_temper.html command.
@ -1007,8 +1007,8 @@ variable as a command-line argument overrides any setting for the same
index variable in the input script, since index variables cannot be
re-defined. See the "variable"_variable.html command for more info on
defining index and other kinds of variables and "this
section"_Section_commands.html#3_2 for more info on using variables in
input scripts.
section"_Section_commands.html#cmd_2 for more info on using variables
in input scripts.
:line