ICODE-ADC/lammps
4
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

ATC version 2.0, date: Nov20

Browse Source 
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12757 f3b2605a-c512-4ea7-a41b-209d697bcdaa
This commit is contained in:
jatempl
2014-11-20 18:59:03 +00:00
parent 2fecb0f4b8
commit ac5973073f
69 changed files with 5895 additions and 2159 deletions
Download Patch File Download Diff File Expand all files Collapse all files

25
lib/atc/FE_Engine.h
View File

@ -222,6 +222,7 @@ namespace ATC {
const PhysicsModel *physicsModel,
const Array<int> &elementMaterials,
FIELDS &rhs,
bool freeOnly=false,
const DenseMatrix<bool> *elementMask=NULL) const;
/** compute RHS for given quadrature */
@ -295,7 +296,7 @@ namespace ATC {
add_fluxes(fieldMask, time, sourceFunctions, nodalSources);
}
/** compute prescribed flux given an array of functions of u, x & t */
/** compute robin flux given an array of functions of u, x & t */
void add_robin_fluxes(const Array2D<bool> &rhsMask,
const FIELDS &fields,
const double time,
@ -308,11 +309,29 @@ namespace ATC {
const ROBIN_SURFACE_SOURCE &sourceFunctions,
SPAR_MAT &tangent) const;
/** compute open flux given a face set */
void add_open_fluxes(const Array2D<bool> &rhsMask,
const FIELDS &fields,
const OPEN_SURFACE &openFaces,
FIELDS &nodalSources,
const FieldName velocity = ELECTRON_VELOCITY) const;
void add_open_tangent(const Array2D<bool> &rhsMask,
const FIELDS &fields,
const OPEN_SURFACE &openFaces,
SPAR_MAT &tangent,
const FieldName velocity = ELECTRON_VELOCITY) const;
/** compute nodal vector of volume based sources */
void add_sources(const Array<bool> &fieldMask,
const double time,
const VOLUME_SOURCE &sourceFunctions,
FIELDS &nodalSources) const;
void add_sources(const Array<bool> &fieldMask,
const double time,
const FIELDS &sources,
FIELDS &nodalSources) const;
/** compute surface flux of a nodal field */
void field_surface_flux(const DENS_MAT &field,
@ -496,6 +515,10 @@ namespace ATC {
/** initialized flag */
bool initialized_;
void parse_partitions(int & argIdx, int narg, char ** arg,
int idof, Array<double> & dx ) const;
void print_partitions(double xmin, double xmax, Array<double> &dx) const;
/** create a uniform, structured mesh */
void create_mesh(Array<double> &dx,
Array<double> &dy,