simplify format handling
This commit is contained in:
@ -18,18 +18,19 @@
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#include "fix_ipi.h"
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#include "fix_ipi.h"
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#include <cstring>
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#include "atom.h"
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#include "atom.h"
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#include "force.h"
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#include "comm.h"
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#include "update.h"
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#include "compute.h"
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#include "domain.h"
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#include "error.h"
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#include "error.h"
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#include "force.h"
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#include "irregular.h"
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#include "kspace.h"
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#include "kspace.h"
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#include "modify.h"
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#include "modify.h"
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#include "compute.h"
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#include "comm.h"
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#include "neighbor.h"
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#include "neighbor.h"
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#include "irregular.h"
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#include "update.h"
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#include "domain.h"
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#include <cstring>
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using namespace LAMMPS_NS;
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using namespace LAMMPS_NS;
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using namespace FixConst;
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using namespace FixConst;
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@ -83,15 +84,13 @@ static void open_socket(int &sockfd, int inet, int port, char* host,
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// fetches information on the host
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// fetches information on the host
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struct addrinfo hints, *res;
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struct addrinfo hints, *res;
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char service[256];
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memset(&hints, 0, sizeof(hints));
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memset(&hints, 0, sizeof(hints));
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hints.ai_socktype = SOCK_STREAM;
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hints.ai_socktype = SOCK_STREAM;
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hints.ai_family = AF_UNSPEC;
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hints.ai_family = AF_UNSPEC;
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hints.ai_flags = AI_PASSIVE;
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hints.ai_flags = AI_PASSIVE;
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sprintf(service,"%d",port); // convert the port number to a string
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ai_err = getaddrinfo(host, std::to_string(port).c_str(), &hints, &res);
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ai_err = getaddrinfo(host, service, &hints, &res);
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if (ai_err!=0)
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if (ai_err!=0)
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error->one(FLERR,"Error fetching host data. Wrong host name?");
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error->one(FLERR,"Error fetching host data. Wrong host name?");
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@ -246,10 +246,8 @@ void FixSRP::setup_pre_force(int /*zz*/)
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int nadd_all = 0, ndel_all = 0;
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int nadd_all = 0, ndel_all = 0;
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MPI_Allreduce(&ndel,&ndel_all,1,MPI_INT,MPI_SUM,world);
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MPI_Allreduce(&ndel,&ndel_all,1,MPI_INT,MPI_SUM,world);
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MPI_Allreduce(&nadd,&nadd_all,1,MPI_INT,MPI_SUM,world);
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MPI_Allreduce(&nadd,&nadd_all,1,MPI_INT,MPI_SUM,world);
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if (comm->me == 0) {
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if (comm->me == 0)
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sprintf(str, "Removed/inserted %d/%d bond particles.", ndel_all,nadd_all);
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error->message(FLERR,"Removed/inserted {}/{} bond particles.", ndel_all,nadd_all);
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error->message(FLERR,str);
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}
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// check ghost comm distances
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// check ghost comm distances
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// warn and change if shorter from estimate
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// warn and change if shorter from estimate
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@ -276,11 +274,9 @@ void FixSRP::setup_pre_force(int /*zz*/)
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cutghostmin = comm->cutghost[2]/length2;
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cutghostmin = comm->cutghost[2]/length2;
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// stop if cutghost is insufficient
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// stop if cutghost is insufficient
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if (cutneighmax_srp > cutghostmin) {
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if (cutneighmax_srp > cutghostmin)
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sprintf(str, "Communication cutoff too small for fix srp. "
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error->all(FLERR,"Communication cutoff too small for fix srp. "
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"Need %f, current %f.", cutneighmax_srp, cutghostmin);
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"Need {:.8}, current {:.8}", cutneighmax_srp, cutghostmin);
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error->all(FLERR,str);
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}
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// assign tags for new atoms, update map
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// assign tags for new atoms, update map
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atom->tag_extend();
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atom->tag_extend();
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@ -515,14 +511,8 @@ void FixSRP::post_run()
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bigint ndelete = natoms_previous - atom->natoms;
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bigint ndelete = natoms_previous - atom->natoms;
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if (comm->me == 0) {
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if (comm->me == 0)
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if (screen) fprintf(screen,"Deleted " BIGINT_FORMAT
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utils::logmesg(lmp,"Deleted {} atoms, new total = {}\n",ndelete,atom->natoms);
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" atoms, new total = " BIGINT_FORMAT "\n",
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ndelete,atom->natoms);
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if (logfile) fprintf(logfile,"Deleted " BIGINT_FORMAT
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" atoms, new total = " BIGINT_FORMAT "\n",
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ndelete,atom->natoms);
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}
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// verlet calls box_too_small_check() in post_run
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// verlet calls box_too_small_check() in post_run
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// this check maps all bond partners
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// this check maps all bond partners
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@ -28,24 +28,23 @@ Please contact Timothy Sirk for questions (tim.sirk@us.army.mil).
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#include "pair_srp.h"
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#include "pair_srp.h"
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#include <cmath>
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#include <cstring>
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#include "atom.h"
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#include "atom.h"
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#include "citeme.h"
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#include "comm.h"
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#include "comm.h"
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#include "force.h"
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#include "neighbor.h"
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#include "neigh_list.h"
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#include "memory.h"
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#include "error.h"
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#include "domain.h"
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#include "domain.h"
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#include "modify.h"
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#include "error.h"
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#include "fix.h"
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#include "fix.h"
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#include "fix_srp.h"
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#include "fix_srp.h"
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#include "thermo.h"
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#include "force.h"
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#include "memory.h"
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#include "modify.h"
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#include "neigh_list.h"
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#include "neighbor.h"
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#include "output.h"
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#include "output.h"
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#include "citeme.h"
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#include "thermo.h"
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#include <cmath>
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#include <cstring>
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using namespace LAMMPS_NS;
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using namespace LAMMPS_NS;
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@ -79,26 +78,15 @@ PairSRP::PairSRP(LAMMPS *lmp) : Pair(lmp)
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nextra = 1;
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nextra = 1;
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segment = nullptr;
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segment = nullptr;
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// generate unique fix-id for this pair style instance
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// create fix SRP instance here with unique fix id
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fix_id = strdup("XX_FIX_SRP");
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fix_id[0] = '0' + srp_instance / 10;
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fix_id[1] = '0' + srp_instance % 10;
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++srp_instance;
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// create fix SRP instance here
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// similar to granular pair styles with history,
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// similar to granular pair styles with history,
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// this should be early enough that FixSRP::pre_exchange()
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// this should be early enough that FixSRP::pre_exchange()
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// will be invoked before other fixes that migrate atoms
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// will be invoked before other fixes that migrate atoms
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// this is checked for in FixSRP
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// this is checked for in FixSRP
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char **fixarg = new char*[3];
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modify->add_fix(fmt::format("{:02d}_FIX_SRP all SRP",srp_instance));
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fixarg[0] = fix_id;
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fixarg[1] = (char *) "all";
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fixarg[2] = (char *) "SRP";
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modify->add_fix(3,fixarg);
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f_srp = (FixSRP *) modify->fix[modify->nfix-1];
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f_srp = (FixSRP *) modify->fix[modify->nfix-1];
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delete [] fixarg;
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++srp_instance;
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}
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}
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/* ----------------------------------------------------------------------
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/* ----------------------------------------------------------------------
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@ -468,10 +456,8 @@ void PairSRP::init_style()
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if (f_srp != (FixSRP *)modify->fix[ifix])
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if (f_srp != (FixSRP *)modify->fix[ifix])
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error->all(FLERR,"Fix SRP has been changed unexpectedly");
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error->all(FLERR,"Fix SRP has been changed unexpectedly");
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if (comm->me == 0) {
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if (comm->me == 0)
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if (screen) fprintf(screen,"Using type %d for bond particles\n",bptype);
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utils::logmesg(lmp,"Using type {} for bond particles\n",bptype);
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if (logfile) fprintf(logfile,"Using type %d for bond particles\n",bptype);
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}
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// set bond and bond particle types in fix srp
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// set bond and bond particle types in fix srp
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// bonds of this type will be represented by bond particles
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// bonds of this type will be represented by bond particles
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