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more lib compilation updates

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This commit is contained in:
Axel Kohlmeyer
2017-08-08 07:20:33 -04:00
parent 8bba29d91e
commit b3244f9c98
18 changed files with 312 additions and 250 deletions
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34
lib/kim/Install.py
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@ -12,7 +12,7 @@ try:
except: from urllib import urlretrieve as geturl
except:
def geturl(url,fname):
cmd = "curl -o %s %s" % (fname,url)
cmd = 'curl -L -o "%s" %s' % (fname,url)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
return txt
@ -139,7 +139,7 @@ if buildflag:
if os.path.isdir(kimdir):
print("kim-api is already installed at %s.\nRemoving it for re-install" % kimdir)
cmd = "rm -rf %s" % kimdir
cmd = 'rm -rf "%s"' % kimdir
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
# configure LAMMPS to use kim-api to be installed
@ -160,48 +160,48 @@ if buildflag:
print("Downloading kim-api tarball ...")
geturl(url,"%s/%s.tgz" % (thisdir,version))
print("Unpacking kim-api tarball ...")
cmd = "cd %s; rm -rf %s; tar zxvf %s.tgz" % (thisdir,version,version)
cmd = 'cd "%s"; rm -rf "%s"; tar -xzvf %s.tgz' % (thisdir,version,version)
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
# configure kim-api
print("Configuring kim-api ...")
cmd = "cd %s/%s; ./configure --prefix='%s'" % (thisdir,version,kimdir)
cmd = 'cd "%s/%s"; ./configure --prefix="%s"' % (thisdir,version,kimdir)
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
# build kim-api
print("Configuring example Models")
cmd = "cd %s/%s; make add-examples" % (thisdir,version)
cmd = 'cd "%s/%s"; make add-examples' % (thisdir,version)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if verboseflag: print (txt.decode("UTF-8"))
if everythingflag:
print("Configuring all OpenKIM models, this will take a while ...")
cmd = "cd %s/%s; make add-OpenKIM" % (thisdir,version)
cmd = 'cd "%s/%s"; make add-OpenKIM' % (thisdir,version)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if verboseflag: print(txt.decode("UTF-8"))
print("Building kim-api ...")
cmd = "cd %s/%s; make" % (thisdir,version)
cmd = 'cd "%s/%s"; make' % (thisdir,version)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if verboseflag: print(txt.decode("UTF-8"))
# install kim-api
print("Installing kim-api ...")
cmd = "cd %s/%s; make install" % (thisdir,version)
cmd = 'cd "%s/%s"; make install' % (thisdir,version)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if verboseflag: print(txt.decode("UTF-8"))
cmd = "cd %s/%s; make install-set-default-to-v1" %(thisdir,version)
cmd = 'cd "%s/%s"; make install-set-default-to-v1' %(thisdir,version)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if verboseflag: print(txt.decode("UTF-8"))
# remove source files
print("Removing kim-api source and build files ...")
cmd = "cd %s; rm -rf %s; rm -rf %s.tgz" % (thisdir,version,version)
cmd = 'cd "%s"; rm -rf %s; rm -rf %s.tgz' % (thisdir,version,version)
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
# add a single model (and possibly its driver) to existing KIM installation
@ -219,11 +219,11 @@ if addflag:
geturl(url,"%s/%s.tgz" % (thisdir,addmodelname))
print("Unpacking item tarball ...")
cmd = "cd %s; tar zxvf %s.tgz" % (thisdir,addmodelname)
cmd = 'cd "%s"; tar -xzvf %s.tgz' % (thisdir,addmodelname)
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
print("Building item ...")
cmd = "cd %s/%s; make; make install" %(thisdir,addmodelname)
cmd = 'cd "%s/%s"; make; make install' %(thisdir,addmodelname)
try:
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
except subprocess.CalledProcessError as e:
@ -231,18 +231,18 @@ if addflag:
# Error: but first, check to see if it needs a driver
firstRunOutput = e.output.decode("UTF-8")
cmd = "cd %s/%s; make kim-item-type" % (thisdir,addmodelname)
cmd = 'cd "%s/%s"; make kim-item-type' % (thisdir,addmodelname)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
txt = txt.decode("UTF-8")
if txt == "ParameterizedModel":
# Get and install driver
cmd = "cd %s/%s; make model-driver-name" % (thisdir,addmodelname)
cmd = 'cd "%s/%s"; make model-driver-name' % (thisdir,addmodelname)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
adddrivername = txt.decode("UTF-8").strip()
print("First installing model driver: %s..." % adddrivername)
cmd = "cd %s; python Install.py -n -a %s" % (thisdir,adddrivername)
cmd = 'cd "%s"; python Install.py -n -a %s' % (thisdir,adddrivername)
try:
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
except subprocess.CalledProcessError as e:
@ -254,7 +254,7 @@ if addflag:
# now install the model that needed the driver
print("Now installing model : %s" % addmodelname)
cmd = "cd %s; python Install.py -n -a %s" % (thisdir,addmodelname)
cmd = 'cd "%s"; python Install.py -n -a %s' % (thisdir,addmodelname)
try:
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
except subprocess.CalledProcessError as e:
@ -272,5 +272,5 @@ if addflag:
if verboseflag: print(txt.decode("UTF-8"))
print("Removing kim item source and build files ...")
cmd = "cd %s; rm -rf %s; rm -rf %s.tgz" %(thisdir,addmodelname,addmodelname)
cmd = 'cd "%s"; rm -rf %s; rm -rf %s.tgz' %(thisdir,addmodelname,addmodelname)
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)