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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14790 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2016-03-28 15:05:50 +00:00
parent 7cea607190
commit b5591e4518
7 changed files with 446 additions and 1 deletions
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src/compute_improper.cpp Normal file
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/* ----------------------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
http://lammps.sandia.gov, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
#include <mpi.h>
#include <string.h>
#include "compute_improper.h"
#include "update.h"
#include "force.h"
#include "improper_hybrid.h"
#include "error.h"
using namespace LAMMPS_NS;
/* ---------------------------------------------------------------------- */
ComputeImproper::ComputeImproper(LAMMPS *lmp, int narg, char **arg) :
Compute(lmp, narg, arg)
{
if (narg != 3) error->all(FLERR,"Illegal compute improper command");
vector_flag = 1;
extvector = 1;
peflag = 1;
timeflag = 1;
// check if improper style hybrid exists
improper = (ImproperHybrid *) force->improper_match("hybrid");
if (!improper)
error->all(FLERR,
"Improper style for compute improper command is not hybrid");
size_vector = nsub = improper->nstyles;
emine = new double[nsub];
vector = new double[nsub];
}
/* ---------------------------------------------------------------------- */
ComputeImproper::~ComputeImproper()
{
delete [] emine;
delete [] vector;
}
/* ---------------------------------------------------------------------- */
void ComputeImproper::init()
{
// recheck improper style in case it has been changed
improper = (ImproperHybrid *) force->improper_match("hybrid");
if (!improper)
error->all(FLERR,
"Improper style for compute improper command is not hybrid");
if (improper->nstyles != nsub)
error->all(FLERR,"Improper style for compute improper command has changed");
}
/* ---------------------------------------------------------------------- */
void ComputeImproper::compute_vector()
{
invoked_vector = update->ntimestep;
if (update->eflag_global != invoked_vector)
error->all(FLERR,"Energy was not tallied on needed timestep");
for (int i = 0; i < nsub; i++)
emine[i] = improper->styles[i]->energy;
MPI_Allreduce(emine,vector,nsub,MPI_DOUBLE,MPI_SUM,world);
}