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change purge target in Makefile, also fixed one issue with Make.py

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This commit is contained in:
Steve Plimpton
2016-09-30 09:17:55 -06:00
parent f7b5afee82
commit b9d0f96a19
9 changed files with 398 additions and 51 deletions
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70
src/Make.py
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@ -26,7 +26,8 @@ libclasses = ("atc","awpmd","colvars","cuda","gpu","h5md",
buildclasses = ("intel","kokkos")
makeclasses = ("cc","flags","mpi","fft","jpg","png")
setargs = ("gzip","#gzip","ffmpeg","#ffmpeg","smallbig","bigbig","smallsmall","exceptions","#exceptions")
setargs = ("gzip","#gzip","ffmpeg","#ffmpeg","smallbig","bigbig",
"smallsmall","exceptions","#exceptions")
actionargs = ("lib-all","file","clean","exe")
gpubuildflag = 0
@ -85,7 +86,8 @@ def switch2str(switches,switch_order):
def compile_check(compiler,ccflags,warn):
open("tmpauto.cpp",'w').write("int main(int, char **) {}\n")
tmp = "%s %s -c tmpauto.cpp" % (compiler,ccflags)
try: txt = subprocess.check_output(tmp,stderr=subprocess.STDOUT,shell=True).decode()
try: txt = subprocess.check_output(tmp,stderr=subprocess.STDOUT,
shell=True).decode()
except subprocess.CalledProcessError as e: txt = e.output
flag = 1
if txt or not os.path.isfile("tmpauto.o"):
@ -105,7 +107,8 @@ def compile_check(compiler,ccflags,warn):
def link_check(linker,linkflags,libs,warn):
open("tmpauto.cpp",'w').write("int main(int, char **) {}\n")
tmp = "%s %s -o tmpauto tmpauto.cpp %s" % (linker,linkflags,libs)
try: txt = subprocess.check_output(tmp,stderr=subprocess.STDOUT,shell=True).decode()
try: txt = subprocess.check_output(tmp,stderr=subprocess.STDOUT,
shell=True).decode()
except subprocess.CalledProcessError as e: txt = e.output
flag = 1
if txt or not os.path.isfile("tmpauto"):
@ -532,7 +535,8 @@ class Actions(object):
if caller == "file" or "file" not in self.alist:
# make certain that 'MAKE/MINE' folder exists.
subprocess.check_output("mkdir -p %s/MAKE/MINE" % dir.src,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("mkdir -p %s/MAKE/MINE" % dir.src,
stderr=subprocess.STDOUT,shell=True)
make.write("%s/MAKE/MINE/Makefile.auto" % dir.src,1)
print("Created src/MAKE/MINE/Makefile.auto")
@ -859,9 +863,12 @@ class Packages(object):
if self.plist: print("Installing packages ...")
for one in self.plist:
if one == "orig": continue
subprocess.check_output("cd %s; make %s" % (dir.src,one),stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make %s" % (dir.src,one),
stderr=subprocess.STDOUT,shell=True)
if self.plist and verbose:
txt = subprocess.check_output("cd %s; make ps" % dir.src,stderr=subprocess.STDOUT,shell=True).decode()
txt = subprocess.check_output("cd %s; make ps" % dir.src,
stderr=subprocess.STDOUT,
shell=True).decode()
print("Package status after installation:")
print(txt)
@ -871,12 +878,16 @@ class Packages(object):
def uninstall(self):
if not self.plist or self.plist[-1] != "orig": return
print("Restoring packages to original state ...")
subprocess.check_output("cd %s; make no-all" % dir.src,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make no-all" % dir.src,
stderr=subprocess.STDOUT,shell=True)
for one in self.all:
if self.original[one]:
subprocess.check_output("cd %s; make yes-%s" % (dir.src,one),stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make yes-%s" % (dir.src,one),
stderr=subprocess.STDOUT,shell=True)
if verbose:
txt = subprocess.check_output("cd %s; make ps" % dir.src,stderr=subprocess.STDOUT,shell=True).decode()
txt = subprocess.check_output("cd %s; make ps" % dir.src,
stderr=subprocess.STDOUT,
shell=True).decode()
print("Restored package status:")
print(txt)
@ -970,7 +981,8 @@ class Settings(object):
def help(self):
return """
-s set1 set2 ...
possible settings = gzip #gzip ffmpeg #ffmpeg smallbig bigbig smallsmall exceptions #exceptions
possible settings = gzip #gzip ffmpeg #ffmpeg
smallbig bigbig smallsmall exceptions #exceptions
alter LAMMPS ifdef settings in Makefile.auto
only happens if new Makefile.auto is created by use of "file" action
gzip and #gzip turn on/off LAMMPS_GZIP setting
@ -1059,7 +1071,8 @@ class ATC(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" %
libdir,stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1110,7 +1123,8 @@ class AWPMD(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" %
libdir,stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1161,7 +1175,8 @@ class COLVARS(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" %
libdir,stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1213,7 +1228,8 @@ class CUDA(object):
def build(self):
libdir = dir.lib + "/cuda"
subprocess.check_output("cd %s; make clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make clean" % libdir,
stderr=subprocess.STDOUT,shell=True)
if self.mode == "double": n = 2
elif self.mode == "mixed": n = 3
elif self.mode == "single": n = 1
@ -1308,7 +1324,8 @@ class GPU(object):
make = "make"
if "shannon" == platform.node(): make = "srun make"
subprocess.check_output("cd %s; %s -f Makefile.auto clean" % (libdir,make),stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; %s -f Makefile.auto clean" %
(libdir,make),stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; %s -j %d -f Makefile.auto" % (libdir,make,jmake.n)
else: txt = "cd %s; %s -f Makefile.auto" % (libdir,make)
@ -1359,7 +1376,8 @@ class H5MD(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make clean" % libdir,
stderr=subprocess.STDOUT,shell=True)
txt = "cd %s; make" % libdir
# if verbose, print output as build proceeds, else only print if fails
@ -1409,7 +1427,8 @@ class MEAM(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" %
libdir,stderr=subprocess.STDOUT,shell=True)
# do not use -j for MEAM build, parallel build does not work
txt = "cd %s; make -f Makefile.auto" % libdir
@ -1460,7 +1479,8 @@ class POEMS(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,
stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1506,9 +1526,10 @@ class PYTHON(object):
libdir = dir.lib + "/python"
if self.lammpsflag:
subprocess.check_output("cd %s; cp Makefile.lammps.%s Makefile.lammps" %
(libdir,self.lammps))
(libdir,self.lammps))
if not os.path.isfile("%s/Makefile.lammps.%s" % (libdir,self.lammps)):
error("Unsuccessful creation of lib/python/Makefile.lammps.%s file" % self.lammps)
error("Unsuccessful creation of lib/python/Makefile.lammps.%s file" %
self.lammps)
else: print("Created lib/python/Makefile.lammps file")
# QMMM lib
@ -1546,7 +1567,8 @@ class QMMM(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
subprocess.check_output("cd %s; make -f Makefile.auto clean" % libdir,stderr=subprocess.STDOUT,shell=True)
subprocess.check_output("cd %s; make -f Makefile.auto clean" %
libdir,stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1597,7 +1619,8 @@ class REAX(object):
make.setvar("EXTRAMAKE","Makefile.lammps.%s" % self.lammps)
make.write("%s/Makefile.auto" % libdir)
commands.getoutput("cd %s; make -f Makefile.auto clean" % libdir)
cmd = "cd %s; make -f Makefile.auto clean" % libdir
subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True)
if jmake: txt = "cd %s; make -j %d -f Makefile.auto" % (libdir,jmake.n)
else: txt = "cd %s; make -f Makefile.auto" % libdir
@ -1643,7 +1666,8 @@ class VORONOI(object):
if not self.install: return
libdir = dir.lib + "/voronoi"
cmd = "cd %s; python install.py %s" % (libdir,self.install)
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,shell=True).decode()
txt = subprocess.check_output(cmd,stderr=subprocess.STDOUT,
shell=True).decode()
if verbose: print(txt)
print("Created lib/voronoi library")