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This commit is contained in:
Axel Kohlmeyer
2022-05-18 00:54:56 -04:00
parent e7b9d03573
commit baa48946e5
1 changed files with 4 additions and 3 deletions
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7
python/lammps/formats.py
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@ -27,7 +27,8 @@ try:
from yaml import CSafeLoader as Loader from yaml import CSafeLoader as Loader
except ImportError: except ImportError:
from yaml import SafeLoader as Loader from yaml import SafeLoader as Loader
except ImportError: except ImportError:
# ignore here, raise an exception when trying to parse yaml instead
pass pass
class LogFile: class LogFile:
@ -70,11 +71,11 @@ class LogFile:
current_run[k] = [] current_run[k] = []
elif re.match(r'^(keywords:.*$|data:$|---$| - \[.*\]$)', line): elif re.match(r'^(keywords:.*$|data:$|---$| - \[.*\]$)', line):
if not has_yaml:
raise Exception('Cannot process YAML format logs without the PyYAML Python module')
style = LogFile.STYLE_YAML style = LogFile.STYLE_YAML
yamllog += line; yamllog += line;
current_run = {} current_run = {}
if not has_yaml:
raise Exception('Cannot process YAML format logs without the PyYAML Python module')
elif re.match(r'^\.\.\.$', line): elif re.match(r'^\.\.\.$', line):
thermo = yaml.load(yamllog, Loader=Loader) thermo = yaml.load(yamllog, Loader=Loader)