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Updating examples

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This commit is contained in:
Joel Clemmer
2021-02-05 16:43:52 -07:00
parent 56841ba912
commit c94a740b4e
16 changed files with 20681 additions and 256 deletions
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32
examples/multi/log.30Nov20.granular.old.intel.1
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@ -1,5 +1,5 @@
LAMMPS (30 Nov 2020)
OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (../comm.cpp:95)
LAMMPS (24 Dec 2020)
OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (../comm.cpp:97)
using 1 OpenMP thread(s) per MPI task
# Big colloid particles and small LJ particles
@ -51,9 +51,9 @@ velocity all create 1.44 87287 loop geom
# multi neighbor and comm for efficiency
neighbor 1 multi/old
neigh_modify delay 0
comm_modify mode multi vel yes
neighbor 1 multi/old #multi
neigh_modify delay 0 #collection/interval 2 1 20
comm_modify mode multi/old vel yes #reduce/multi
# colloid potential
@ -64,7 +64,7 @@ fix 1 all nph/sphere iso 0.0 1.0 10.0 drag 1.0
fix 2 all enforce2d
fix 3 all deform 1 xy erate 1e-3
dump 1 all custom 1000 dump.granular id x y z radius
#dump 1 all custom 1000 dump.granular id x y z radius
#dump 2 all image 1000 image.*.jpg type type # zoom 1.5 center d 0.5 0.5 0.5
#dump_modify 2 pad 5 adiam 1 5.0 adiam 2 1.5
@ -90,7 +90,7 @@ Neighbor list info ...
pair build: half/size/multi/old/newton/tri
stencil: half/multi/old/2d/tri
bin: standard
Per MPI rank memory allocation (min/avg/max) = 11.75 | 11.75 | 11.75 Mbytes
Per MPI rank memory allocation (min/avg/max) = 10.38 | 10.38 | 10.38 Mbytes
Step Temp E_pair TotEng Press Volume
0 1.44 0 1.4395623 0.66837658 7200
1000 0.32273428 0 0.32263619 0.17174972 7859.8897
@ -143,20 +143,20 @@ Step Temp E_pair TotEng Press Volume
48000 0.00017794764 0 0.00017789356 0.93582953 1794.7043
49000 0.00018879338 0 0.000188736 0.95775166 1780.0323
50000 0.00017781117 0 0.00017775712 0.97893641 1765.9442
Loop time of 80.8597 on 1 procs for 50000 steps with 3290 atoms
Loop time of 74.6636 on 1 procs for 50000 steps with 3290 atoms
Performance: 267129.375 tau/day, 618.355 timesteps/s
Performance: 289297.713 tau/day, 669.671 timesteps/s
100.0% CPU use with 1 MPI tasks x 1 OpenMP threads
MPI task timing breakdown:
Section | min time | avg time | max time |%varavg| %total
---------------------------------------------------------------
Pair | 61.524 | 61.524 | 61.524 | 0.0 | 76.09
Neigh | 2.2021 | 2.2021 | 2.2021 | 0.0 | 2.72
Comm | 6.748 | 6.748 | 6.748 | 0.0 | 8.35
Output | 0.25904 | 0.25904 | 0.25904 | 0.0 | 0.32
Modify | 8.9408 | 8.9408 | 8.9408 | 0.0 | 11.06
Other | | 1.186 | | | 1.47
Pair | 56.696 | 56.696 | 56.696 | 0.0 | 75.93
Neigh | 2.2232 | 2.2232 | 2.2232 | 0.0 | 2.98
Comm | 6.1867 | 6.1867 | 6.1867 | 0.0 | 8.29
Output | 0.0012016 | 0.0012016 | 0.0012016 | 0.0 | 0.00
Modify | 8.432 | 8.432 | 8.432 | 0.0 | 11.29
Other | | 1.125 | | | 1.51
Nlocal: 3290.00 ave 3290 max 3290 min
Histogram: 1 0 0 0 0 0 0 0 0 0
@ -172,4 +172,4 @@ Dangerous builds = 0
Please see the log.cite file for references relevant to this simulation
Total wall time: 0:01:20
Total wall time: 0:01:14